RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 MMP23AO75900 390 aa12.78□□□□□ -0.36
SYT1-201ENST00000261205 PTTG1IPP53801 180 aa12.78□□□□□ -0.36
SYT1-201ENST00000261205 C3orf56Q8N813 242 aa12.78□□□□□ -0.36
SYT1-201ENST00000261205 LINC00477Q96M19 166 aa12.78□□□□□ -0.36
SYT1-201ENST00000261205 TMEM249Q2WGJ8 235 aa12.77□□□□□ -0.36
SYT1-201ENST00000261205 TMEM50AO95807 157 aa12.77□□□□□ -0.36
SYT1-201ENST00000261205 ZNF134P52741 427 aa12.77□□□□□ -0.36
SYT1-201ENST00000261205 ZNF329Q86UD4 541 aa12.77□□□□□ -0.36
SYT1-201ENST00000261205 MAPK1IP1LQ8NDC0 245 aa12.77□□□□□ -0.36
SYT1-201ENST00000261205 CACNG7P62955 275 aa12.77□□□□□ -0.37
SYT1-201ENST00000261205 C1orf194Q5T5A4 169 aa12.77□□□□□ -0.37
SYT1-201ENST00000261205 C11orf44Q8N8P7 122 aa12.77□□□□□ -0.37
SYT1-201ENST00000261205 NEU1Q99519 415 aa12.77□□□□□ -0.37
SYT1-201ENST00000261205 C1QTNF4Q9BXJ3 329 aa12.77□□□□□ -0.37
SYT1-201ENST00000261205 HOXB4P17483 251 aaPredicted RBP12.77□□□□□ -0.37
SYT1-201ENST00000261205 PMS2P5A8MQ11 134 aa12.76□□□□□ -0.37
SYT1-201ENST00000261205 TCF21O43680 179 aa12.76□□□□□ -0.37
SYT1-201ENST00000261205 RNASE4P34096 147 aaKnown RBP12.76□□□□□ -0.37
SYT1-201ENST00000261205 RPP25LQ8N5L8 163 aaKnown RBP12.76□□□□□ -0.37
SYT1-201ENST00000261205 VPREB3Q9UKI3 123 aa12.76□□□□□ -0.37
SYT1-201ENST00000261205 RFNGQ9Y644 331 aa12.76□□□□□ -0.37
SYT1-201ENST00000261205 ZNRD1Q9P1U0 126 aa12.76□□□□□ -0.37
SYT1-201ENST00000261205 HNRNPA3P51991 378 aaKnown RBP12.76□□□□□ -0.37
SYT1-201ENST00000261205 C12orf54Q6X4T0 127 aa12.76□□□□□ -0.37
SYT1-201ENST00000261205 PACRGQ96M98 296 aaPredicted RBP12.76□□□□□ -0.37
SYT1-201ENST00000261205 SHANK2-AS3Q9BTD1 123 aa12.76□□□□□ -0.37
SYT1-201ENST00000261205 IGHV4-30-2A0A087WSY4 118 aa12.75□□□□□ -0.37
SYT1-201ENST00000261205 C12orf57Q99622 126 aa12.75□□□□□ -0.37
SYT1-201ENST00000261205 LIME1Q9H400 295 aa12.75□□□□□ -0.37
SYT1-201ENST00000261205 F2Z2F3 143 aa12.75□□□□□ -0.37
SYT1-201ENST00000261205 PSMG4Q5JS54 123 aa12.75□□□□□ -0.37
SYT1-201ENST00000261205 RHPN1-AS1Q9BWJ2 59 aa12.75□□□□□ -0.37
SYT1-201ENST00000261205 SCRT1Q9BWW7 348 aa12.75□□□□□ -0.37
SYT1-201ENST00000261205 LY96Q9Y6Y9 160 aa12.75□□□□□ -0.37
SYT1-201ENST00000261205 IZUMO1RA6ND01 250 aa12.75□□□□□ -0.37
SYT1-201ENST00000261205 WISP2O76076 250 aa12.75□□□□□ -0.37
SYT1-201ENST00000261205 RPL23P62829 140 aaKnown RBP12.75□□□□□ -0.37
SYT1-201ENST00000261205 GCSAMLQ5JQS6 135 aa12.75□□□□□ -0.37
SYT1-201ENST00000261205 TRBV20OR9-2A0A075B6H5 130 aa12.74□□□□□ -0.37
SYT1-201ENST00000261205 C9JCJ5 164 aa12.74□□□□□ -0.37
SYT1-201ENST00000261205 OR10AG1Q8NH19 301 aa12.74□□□□□ -0.37
SYT1-201ENST00000261205 TNFRSF18Q9Y5U5 241 aa12.74□□□□□ -0.37
SYT1-201ENST00000261205 YLPM1P49750 1951 aaKnown RBP12.74□□□□□ -0.37
SYT1-201ENST00000261205 TRGC2P03986 189 aa12.74□□□□□ -0.37
SYT1-201ENST00000261205 AGMATQ9BSE5 352 aa12.74□□□□□ -0.37
SYT1-201ENST00000261205 NUP210LQ5VU65 1888 aa12.74□□□□□ -0.37
SYT1-201ENST00000261205 LOC389332A0A1B0GUA5 103 aa12.74□□□□□ -0.37
SYT1-201ENST00000261205 LINC01619G3V211 115 aa12.74□□□□□ -0.37
SYT1-201ENST00000261205 FAM74A4Q5TZK3 123 aa12.74□□□□□ -0.37
SYT1-201ENST00000261205 MCRIP2Q9BUT9 160 aaKnown RBP12.74□□□□□ -0.37
SYT1-201ENST00000261205 A0A1B0GUS0 222 aa12.74□□□□□ -0.37
SYT1-201ENST00000261205 M0R381 172 aa12.73□□□□□ -0.37
SYT1-201ENST00000261205 NUDT3O95989 172 aa12.73□□□□□ -0.37
SYT1-201ENST00000261205 IGKV1-39P01597 117 aa12.73□□□□□ -0.37
SYT1-201ENST00000261205 IGKV1D-39P04432 117 aa12.73□□□□□ -0.37
SYT1-201ENST00000261205 NDUFA4O00483 81 aa12.73□□□□□ -0.37
SYT1-201ENST00000261205 CD33P20138 364 aa12.73□□□□□ -0.37
SYT1-201ENST00000261205 ZNF138P52744 262 aa12.73□□□□□ -0.37
SYT1-201ENST00000261205 C19orf54Q5BKX5 351 aa12.73□□□□□ -0.37
SYT1-201ENST00000261205 WIPF3A6NGB9 483 aa12.73□□□□□ -0.37
SYT1-201ENST00000261205 OR8A1Q8NGG7 326 aa12.73□□□□□ -0.37
SYT1-201ENST00000261205 SEPSECSQ9HD40 501 aaKnown RBP12.73□□□□□ -0.37
SYT1-201ENST00000261205 BTF3P20290 206 aaKnown RBP12.73□□□□□ -0.37
SYT1-201ENST00000261205 TRAV5A0A0B4J249 113 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 AMBPP02760 352 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 TTC9CQ8N5M4 171 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 OR1N2Q8NGR9 330 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 NCOR2Q9Y618 2525 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 OR11H12B2RN74 326 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 TCRAP04437 139 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
SYT1-201ENST00000261205 IMMP2LQ96T52 175 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 VSIRQ9H7M9 311 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 CD7P09564 240 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 CNTFRP26992 372 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 SRIP30626 198 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 GNG5P63218 68 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 PPBPP02775 128 aa12.72□□□□□ -0.37
SYT1-201ENST00000261205 CREBBPQ92793 2442 aa12.71□□□□□ -0.37
SYT1-201ENST00000261205 MED13LQ71F56 2210 aa12.71□□□□□ -0.37
SYT1-201ENST00000261205 TGIF2-C20orf24A0A0A6YYL0 155 aa12.71□□□□□ -0.37
SYT1-201ENST00000261205 CENPVL3A0A0U1RRI6 287 aa12.71□□□□□ -0.37
SYT1-201ENST00000261205 OVOL3O00110 214 aa12.71□□□□□ -0.37
SYT1-201ENST00000261205 TCAPO15273 167 aa12.71□□□□□ -0.37
SYT1-201ENST00000261205 LEPROTL1O95214 131 aa12.71□□□□□ -0.37
SYT1-201ENST00000261205 DLX1P56177 255 aa12.71□□□□□ -0.37
SYT1-201ENST00000261205 TMEM136Q6ZRR5 245 aa12.71□□□□□ -0.37
SYT1-201ENST00000261205 TRGV2A0A075B6R0 118 aa12.71□□□□□ -0.37
SYT1-201ENST00000261205 LRP4O75096 1905 aa12.71□□□□□ -0.38
SYT1-201ENST00000261205 REC114Q7Z4M0 266 aa12.71□□□□□ -0.38
SYT1-201ENST00000261205 NRN1Q9NPD7 142 aa12.71□□□□□ -0.38
SYT1-201ENST00000261205 M0R143 59 aa12.71□□□□□ -0.38
SYT1-201ENST00000261205 SMIM6P0DI80 62 aa12.7□□□□□ -0.38
SYT1-201ENST00000261205 DEFB112Q30KQ8 113 aa12.7□□□□□ -0.38
SYT1-201ENST00000261205 SMIM12Q96EX1 92 aa12.7□□□□□ -0.38
SYT1-201ENST00000261205 LOXL1Q08397 574 aaPredicted RBP12.7□□□□□ -0.38
SYT1-201ENST00000261205 PMCHL1Q16048 86 aa12.7□□□□□ -0.38
SYT1-201ENST00000261205 ZNF841Q6ZN19 808 aa12.7□□□□□ -0.38
SYT1-201ENST00000261205 NPBQ8NG41 125 aa12.7□□□□□ -0.38
SYT1-201ENST00000261205 TMEM242Q9NWH2 141 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms