RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 INS-IGF2F8WCM5 200 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 CT45A6P0DMU7 189 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 CT45A5P0DMU8 189 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 CT45A7P0DMV0 189 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 NHLH1Q02575 133 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 LINC01545Q5VT33 79 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 ERASQ7Z444 233 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 MOB3BQ86TA1 216 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 STXBP6Q8NFX7 210 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 VSTM2AQ8TAG5 236 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 CCL17Q92583 94 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 GPR82Q96P67 336 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 MLST8Q9BVC4 326 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 ZNF292O60281 2723 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 MUC6Q6W4X9 2439 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 GVINP1Q7Z2Y8 2422 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 GAGE10A6NGK3 116 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 SH2D7A6NKC9 451 aaPredicted RBP8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 DLL1O00548 723 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 COX7A2P2O60397 106 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 CIDEAO60543 219 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 NBEAP1P0C6P0 100 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 C10orf113Q5VZT2 155 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 TMEM200BQ69YZ2 307 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 UFSP1Q6NVU6 142 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 LINC00173Q6ZV60 143 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 TNFRSF14Q92956 283 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 FXYD5Q96DB9 178 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 EPDR1Q9UM22 224 aa8.67□□□□□ -1.02
CHRNA1-201ENST00000261007 LOC102724200A0A096LPH7 203 aaPredicted RBP8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 C7orf71A4D174 169 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 SRRM4A7MD48 611 aaKnown RBP8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 H3BRM9 83 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 MYOD1P15172 320 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 CEACAM3P40198 252 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 MORN5Q5VZ52 161 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 ZNF841Q6ZN19 808 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 PDPNQ86YL7 162 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 BPIFA4PQ86YQ2 179 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 OR5AN1Q8NGI8 311 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 MEGF9Q9H1U4 602 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 CEP250Q9BV73 2442 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 A0A087X0K7 114 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 C19orf71A6NCJ1 209 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 G3V4G9 280 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 ZNF137PP52743 207 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 PAX2Q02962 417 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 TMEM177Q53S58 311 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 TMEM97Q5BJF2 176 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 RBPMS2Q6ZRY4 209 aaKnown RBP8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 C2orf91Q6ZV80 131 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 FER1L6-AS1Q8NA97 138 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 TP73-AS1Q9UF72 201 aa8.66□□□□□ -1.02
CHRNA1-201ENST00000261007 C9orf118A6NHY6 69 aa8.65□□□□□ -1.02
CHRNA1-201ENST00000261007 PYYP10082 97 aa8.65□□□□□ -1.02
CHRNA1-201ENST00000261007 MC5RP33032 325 aa8.65□□□□□ -1.02
CHRNA1-201ENST00000261007 FOXA3P55318 350 aaPredicted RBP8.65□□□□□ -1.02
CHRNA1-201ENST00000261007 ERHP84090 104 aaKnown RBP8.65□□□□□ -1.02
CHRNA1-201ENST00000261007 TMEM155Q4W5P6 130 aa8.65□□□□□ -1.02
CHRNA1-201ENST00000261007 OR4C13Q8NGP0 309 aa8.65□□□□□ -1.02
CHRNA1-201ENST00000261007 OR10X1Q8NGY0 326 aa8.65□□□□□ -1.02
CHRNA1-201ENST00000261007 FMC1Q96HJ9 113 aa8.65□□□□□ -1.02
CHRNA1-201ENST00000261007 ZNF430Q9H8G1 570 aaPredicted RBP8.65□□□□□ -1.02
CHRNA1-201ENST00000261007 TCRBV4S1A1TA0A5B7 111 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 A6NDN8 102 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 CCL21O00585 134 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 P01737 135 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 CCL3L1P16619 93 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 HTR1DP28221 377 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 LOXP28300 417 aaPredicted RBP8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 MLANAQ16655 118 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 UTF1Q5T230 341 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 ASPHD1Q5U4P2 390 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 PATE2Q6UY27 113 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 ZCCHC24Q8N2G6 241 aaKnown RBP8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 THAP8Q8NA92 274 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 GTSF1Q8WW33 167 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 FLYWCH2Q96CP2 140 aaKnown RBP8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 HARBI1Q96MB7 349 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 PLCE1Q9P212 2302 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 ZFHX2Q9C0A1 2572 aaPredicted RBP8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 CHEK1O14757 476 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 LTAP01374 205 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 RBP4P02753 201 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 SLC25A5P05141 298 aaKnown RBP8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 GATD1Q8NB37 220 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 OR1N2Q8NGR9 330 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 AP1S3Q96PC3 154 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 TMUB1Q9BVT8 246 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 MRPL20Q9BYC9 149 aaKnown RBP8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 NDUFA4L2Q9NRX3 87 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 RAXQ9Y2V3 346 aa8.64□□□□□ -1.03
CHRNA1-201ENST00000261007 ACACAQ13085 2346 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 FAM90A27PA6NNH2 459 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 NPIPB6E9PJ23 425 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 SIVA1O15304 175 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 MOSP00540 346 aa8.63□□□□□ -1.03
CHRNA1-201ENST00000261007 SAA1P0DJI8 122 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms