RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TRAV41A0A0B4J266 112 aa17.48■□□□□ 0.39
SIX3-201ENST00000260653 PDE6DO43924 150 aa17.48■□□□□ 0.39
SIX3-201ENST00000260653 C15orf32Q32M92 178 aa17.48■□□□□ 0.39
SIX3-201ENST00000260653 TVP23CQ96ET8 276 aa17.48■□□□□ 0.39
SIX3-201ENST00000260653 UBE2L3P68036 154 aaKnown RBP17.47■□□□□ 0.39
SIX3-201ENST00000260653 C19orf54Q5BKX5 351 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 C16orf82Q7Z2V1 217 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 BIN3Q9NQY0 253 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 TRBV9A0A0B4J1U6 114 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 OR2T8A6NH00 312 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 M0QZK8 103 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 KLK9Q2XQG4 91 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 Q6ZS46 218 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 MS4A10Q96PG2 267 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 KLK9Q9UKQ9 250 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 TOMM40O96008 361 aa17.46■□□□□ 0.39
SIX3-201ENST00000260653 CRIP2P52943 208 aaPredicted RBP17.46■□□□□ 0.39
SIX3-201ENST00000260653 RHEBQ15382 184 aa17.46■□□□□ 0.39
SIX3-201ENST00000260653 LEMD1Q68G75 181 aa17.46■□□□□ 0.39
SIX3-201ENST00000260653 HIGD1AQ9Y241 93 aa17.46■□□□□ 0.39
SIX3-201ENST00000260653 TRAV30A0A087WSZ9 112 aa17.46■□□□□ 0.38
SIX3-201ENST00000260653 SMAD7O15105 426 aaKnown RBP17.46■□□□□ 0.38
SIX3-201ENST00000260653 TXNDC17Q9BRA2 123 aa17.46■□□□□ 0.38
SIX3-201ENST00000260653 PAXXQ9BUH6 204 aa17.46■□□□□ 0.38
SIX3-201ENST00000260653 SONP18583 2426 aaKnown RBP17.46■□□□□ 0.38
SIX3-201ENST00000260653 IGHG2P01859 326 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 IER3P46695 156 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 DEFA6Q01524 100 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 VN1R17PQ8TDU5 208 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 DERL1Q9BUN8 251 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 SCO2A0A1W2PP80 73 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 SNRPCP09234 159 aaKnown RBP17.45■□□□□ 0.38
SIX3-201ENST00000260653 NDUFB4O95168 129 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 IGF1P05019 195 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 IL4P05112 153 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 YPEL3P61236 119 aaPredicted RBP17.44■□□□□ 0.38
SIX3-201ENST00000260653 C9orf139Q6ZV77 190 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 ZNF491Q8N8L2 437 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 NOL4LQ96MY1 436 aaPredicted RBP17.44■□□□□ 0.38
SIX3-201ENST00000260653 SDF2L1Q9HCN8 221 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 MLXQ9UH92 298 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 F6UZH7 168 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 NECAP1Q8NC96 275 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 RNF125Q96EQ8 232 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 MRPL27Q9P0M9 148 aaKnown RBP17.44■□□□□ 0.38
SIX3-201ENST00000260653 ARL2-SNX15V9GYD0 113 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 AKAP9Q99996 3911 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 CTSGP08311 255 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 ZNF502Q8TBZ5 544 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 FXYD5Q96DB9 178 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 CHRDL1Q9BU40 450 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 SLC25A39Q9BZJ4 359 aaPredicted RBP17.43■□□□□ 0.38
SIX3-201ENST00000260653 ACANP16112 2415 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 GGTLC3B5MD39 225 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 NAT8Q9UHE5 227 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 FCGR2BP31994 310 aaPredicted RBP17.42■□□□□ 0.38
SIX3-201ENST00000260653 CIDEAO60543 219 aa17.42■□□□□ 0.38
SIX3-201ENST00000260653 GPR183P32249 361 aa17.42■□□□□ 0.38
SIX3-201ENST00000260653 ADMP35318 185 aa17.42■□□□□ 0.38
SIX3-201ENST00000260653 TXN2Q99757 166 aa17.42■□□□□ 0.38
SIX3-201ENST00000260653 WI2-2373I1.2A0A1W2PRP0 233 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 PNRC1Q12796 327 aaPredicted RBP17.41■□□□□ 0.38
SIX3-201ENST00000260653 USF2Q15853 346 aaPredicted RBP17.41■□□□□ 0.38
SIX3-201ENST00000260653 TMEM241Q24JQ0 296 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 CCDC140Q96MF4 163 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 SMCO4Q9NRQ5 59 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 A0A1W2PRE2 83 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 GP9P14770 177 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 OR2C1O95371 312 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 STXBP6Q8NFX7 210 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 Q8WTZ3 238 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 ISOC2Q96AB3 205 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 FOXC2Q99958 501 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 TCAPO15273 167 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 RAB4AP20338 218 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 SUMO1P63165 101 aaKnown RBP17.4■□□□□ 0.38
SIX3-201ENST00000260653 ADIRFQ15847 76 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 Q6YL49 198 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 CLEC3BP05452 202 aa17.39■□□□□ 0.37
SIX3-201ENST00000260653 IL17RELQ6ZVW7 336 aa17.39■□□□□ 0.37
SIX3-201ENST00000260653 OR5R1Q8NH85 324 aa17.39■□□□□ 0.37
SIX3-201ENST00000260653 IGHV3-35A0A0C4DH35 117 aa17.39■□□□□ 0.37
SIX3-201ENST00000260653 PPIFP30405 207 aaKnown RBP17.39■□□□□ 0.37
SIX3-201ENST00000260653 SCGB2A1O75556 95 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 S100A8P05109 93 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 RPL23P62829 140 aaKnown RBP17.38■□□□□ 0.37
SIX3-201ENST00000260653 BLNKQ8WV28 456 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 C11orf52Q96A22 123 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 SHANK2-AS3Q9BTD1 123 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 TRBV20OR9-2A0A075B6H5 130 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 H3BRN7 92 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 AP4M1O00189 453 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 TRGV3P03979 118 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 CLEC19AQ6UXS0 136 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 EEF1AKMT3Q96AZ1 226 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 VPREB3Q9UKI3 123 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 CRYBB3P26998 211 aa17.37■□□□□ 0.37
SIX3-201ENST00000260653 ZNF414Q96IQ9 312 aa17.37■□□□□ 0.37
SIX3-201ENST00000260653 NOTCH2Q04721 2471 aa17.37■□□□□ 0.37
SIX3-201ENST00000260653 H3BTX0 84 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms