RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PIEZO2Q9H5I5 2752 aa12.16□□□□□ -0.46
DDX56-201ENST00000258772 TEX22C9J3V5 150 aa12.15□□□□□ -0.46
DDX56-201ENST00000258772 BUB1B-PAK6H3BSN5 160 aa12.15□□□□□ -0.46
DDX56-201ENST00000258772 H3BTX0 84 aa12.15□□□□□ -0.46
DDX56-201ENST00000258772 LTAP01374 205 aa12.15□□□□□ -0.46
DDX56-201ENST00000258772 TCF15Q12870 199 aa12.15□□□□□ -0.46
DDX56-201ENST00000258772 TCF24Q7RTU0 167 aa12.15□□□□□ -0.46
DDX56-201ENST00000258772 FMC1Q96HJ9 113 aa12.15□□□□□ -0.46
DDX56-201ENST00000258772 RPP21Q9H633 154 aaKnown RBP12.15□□□□□ -0.46
DDX56-201ENST00000258772 HSBP1O75506 76 aa12.15□□□□□ -0.46
DDX56-201ENST00000258772 TCRAP04437 139 aa12.15□□□□□ -0.46
DDX56-201ENST00000258772 CLEC7AQ9BXN2 247 aa12.15□□□□□ -0.46
DDX56-201ENST00000258772 WNT10AQ9GZT5 417 aa12.15□□□□□ -0.46
DDX56-201ENST00000258772 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
DDX56-201ENST00000258772 B9A039 149 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 HIGD1AQ9Y241 93 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 ZFHX2Q9C0A1 2572 aaPredicted RBP12.14□□□□□ -0.47
DDX56-201ENST00000258772 C19orf71A6NCJ1 209 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 A8MWL6 223 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 LYNX1G3V0Z9 82 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 LYNX1P0DP58 116 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 PSG1P11464 419 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 MMDQ15546 238 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 CT83Q5H943 113 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 OR2D3Q8NGH3 330 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 FBXL15Q9H469 300 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 ZNF492Q9P255 531 aa12.14□□□□□ -0.47
DDX56-201ENST00000258772 P01737 135 aa12.13□□□□□ -0.47
DDX56-201ENST00000258772 IGLC1P0CG04 106 aa12.13□□□□□ -0.47
DDX56-201ENST00000258772 IGLC2P0DOY2 106 aa12.13□□□□□ -0.47
DDX56-201ENST00000258772 IGLC3P0DOY3 106 aa12.13□□□□□ -0.47
DDX56-201ENST00000258772 HBBP68871 147 aa12.13□□□□□ -0.47
DDX56-201ENST00000258772 PRR30Q53SZ7 412 aaPredicted RBP12.13□□□□□ -0.47
DDX56-201ENST00000258772 GTSF1Q8WW33 167 aa12.13□□□□□ -0.47
DDX56-201ENST00000258772 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
DDX56-201ENST00000258772 DMXL2Q8TDJ6 3036 aa12.13□□□□□ -0.47
DDX56-201ENST00000258772 A6NNC1 897 aa12.12□□□□□ -0.47
DDX56-201ENST00000258772 M0R2Z0 102 aa12.12□□□□□ -0.47
DDX56-201ENST00000258772 BATFQ16520 125 aa12.12□□□□□ -0.47
DDX56-201ENST00000258772 SRSF12Q8WXF0 261 aaKnown RBP12.12□□□□□ -0.47
DDX56-201ENST00000258772 FAM181BA6NEQ2 426 aa12.12□□□□□ -0.47
DDX56-201ENST00000258772 CD3EP07766 207 aa12.12□□□□□ -0.47
DDX56-201ENST00000258772 LYZP61626 148 aa12.12□□□□□ -0.47
DDX56-201ENST00000258772 LCN12Q6JVE5 192 aa12.12□□□□□ -0.47
DDX56-201ENST00000258772 RNASEKQ6P5S7 137 aaKnown RBP12.12□□□□□ -0.47
DDX56-201ENST00000258772 I3L2K1 104 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 COX7A1P24310 79 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 PRR31Q5SQ13 230 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 EBLN2Q6P2I7 272 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 RPEQ96AT9 228 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 DAZAP1Q96EP5 407 aaKnown RBP12.11□□□□□ -0.47
DDX56-201ENST00000258772 TMEM208Q9BTX3 173 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 SLC25A39Q9BZJ4 359 aaPredicted RBP12.11□□□□□ -0.47
DDX56-201ENST00000258772 LPAR2Q9HBW0 351 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 SPTBN2O15020 2390 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 PPIAL4CA0A0B4J2A2 164 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
DDX56-201ENST00000258772 KALRNO60229 2985 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 PPIAL4GP0DN37 164 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 PMCHL1Q16048 86 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 URB1-AS1Q96HZ7 61 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 PGLYRP4Q96LB8 373 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 OTORQ9NRC9 128 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 TMEM14CQ9P0S9 112 aa12.11□□□□□ -0.47
DDX56-201ENST00000258772 SOX21Q9Y651 276 aaPredicted RBP12.11□□□□□ -0.47
DDX56-201ENST00000258772 RBPJQ06330 500 aa12.1□□□□□ -0.47
DDX56-201ENST00000258772 KLHDC1Q8N7A1 406 aa12.1□□□□□ -0.47
DDX56-201ENST00000258772 OR8B3Q8NGG8 313 aa12.1□□□□□ -0.47
DDX56-201ENST00000258772 OR8B2Q96RD0 313 aa12.1□□□□□ -0.47
DDX56-201ENST00000258772 GFRA4Q9GZZ7 299 aa12.1□□□□□ -0.47
DDX56-201ENST00000258772 TRAV8-1A0A0A6YYK1 113 aa12.1□□□□□ -0.47
DDX56-201ENST00000258772 C2orf70A6NJV1 201 aa12.1□□□□□ -0.47
DDX56-201ENST00000258772 DLEU1O43261 78 aa12.1□□□□□ -0.47
DDX56-201ENST00000258772 TXN2Q99757 166 aa12.1□□□□□ -0.47
DDX56-201ENST00000258772 RNF5Q99942 180 aa12.1□□□□□ -0.47
DDX56-201ENST00000258772 RASL11BQ9BPW5 248 aa12.1□□□□□ -0.47
DDX56-201ENST00000258772 DCHS1Q96JQ0 3298 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 LY6LH3BQJ8 138 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 RBP4P02753 201 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 Q6ZN92 141 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 RBPMS2Q6ZRY4 209 aaKnown RBP12.09□□□□□ -0.47
DDX56-201ENST00000258772 EXOC3-AS1Q8N2X6 119 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 FAM231BA6NCW3 169 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 NPIPB6E9PJ23 425 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 IGKV1-17P01599 117 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 IGLV2-11P01706 119 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 CD24P25063 80 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 PLGLAQ15195 96 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 COL5A1-AS1Q5SY13 56 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 Q86TA4 180 aa12.09□□□□□ -0.47
DDX56-201ENST00000258772 CIARTQ8N365 385 aaPredicted RBP12.09□□□□□ -0.47
DDX56-201ENST00000258772 COL8A1P27658 744 aa12.08□□□□□ -0.48
DDX56-201ENST00000258772 FOXA3P55318 350 aaPredicted RBP12.08□□□□□ -0.48
DDX56-201ENST00000258772 Q56UQ5 140 aa12.08□□□□□ -0.48
DDX56-201ENST00000258772 FAM162BQ5T6X4 162 aa12.08□□□□□ -0.48
DDX56-201ENST00000258772 LINC01560Q8TB33 94 aa12.08□□□□□ -0.48
DDX56-201ENST00000258772 HNRNPA3P51991 378 aaKnown RBP12.08□□□□□ -0.48
DDX56-201ENST00000258772 GAGE1Q13065 139 aa12.08□□□□□ -0.48
DDX56-201ENST00000258772 GOLT1AQ6ZVE7 132 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms