RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 OR1L4Q8NGR5 311 aa15.17■□□□□ 0.02
SNX4-201ENST00000251775 H1FXQ92522 213 aaKnown RBP15.17■□□□□ 0.02
SNX4-201ENST00000251775 HARBI1Q96MB7 349 aa15.17■□□□□ 0.02
SNX4-201ENST00000251775 NDUFA4L2Q9NRX3 87 aa15.17■□□□□ 0.02
SNX4-201ENST00000251775 EPDR1Q9UM22 224 aa15.17■□□□□ 0.02
SNX4-201ENST00000251775 E7EUB6 86 aa15.17■□□□□ 0.02
SNX4-201ENST00000251775 TNFRSF13BO14836 293 aaPredicted RBP15.17■□□□□ 0.02
SNX4-201ENST00000251775 PSG9Q00887 426 aa15.17■□□□□ 0.02
SNX4-201ENST00000251775 DIAPH2-AS1Q14236 149 aa15.17■□□□□ 0.02
SNX4-201ENST00000251775 OSR1Q8TAX0 266 aaPredicted RBP15.17■□□□□ 0.02
SNX4-201ENST00000251775 MCRIP2Q9BUT9 160 aaKnown RBP15.17■□□□□ 0.02
SNX4-201ENST00000251775 MLST8Q9BVC4 326 aa15.17■□□□□ 0.02
SNX4-201ENST00000251775 PRSS22Q9GZN4 317 aa15.17■□□□□ 0.02
SNX4-201ENST00000251775 FNDC4Q9H6D8 234 aaPredicted RBP15.17■□□□□ 0.02
SNX4-201ENST00000251775 TOX4O94842 621 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 PLAUP00749 431 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 OR5AN1Q8NGI8 311 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 KLF12Q9Y4X4 402 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 PIEZO2Q9H5I5 2752 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 IGKV1D-37A0A075B6S9 117 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 HSBP1L1C9JCN9 74 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 MOSP00540 346 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 IGHV3-48P01763 117 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 HLA-DRB1P01911 266 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 APOA2P02652 100 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 SLC25A5P05141 298 aaKnown RBP15.16■□□□□ 0.02
SNX4-201ENST00000251775 SMIM15Q7Z3B0 74 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 PGLYRP4Q96LB8 373 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 GPR82Q96P67 336 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 ZNF430Q9H8G1 570 aaPredicted RBP15.16■□□□□ 0.02
SNX4-201ENST00000251775 CTSZQ9UBR2 303 aa15.16■□□□□ 0.02
SNX4-201ENST00000251775 MUC6Q6W4X9 2439 aa15.15■□□□□ 0.02
SNX4-201ENST00000251775 A0A087X0K7 114 aa15.15■□□□□ 0.02
SNX4-201ENST00000251775 CD5LO43866 347 aa15.15■□□□□ 0.02
SNX4-201ENST00000251775 BPIFB3P59826 476 aa15.15■□□□□ 0.02
SNX4-201ENST00000251775 NPIPB3Q92617 1050 aa15.15■□□□□ 0.02
SNX4-201ENST00000251775 SMIM12Q96EX1 92 aa15.15■□□□□ 0.02
SNX4-201ENST00000251775 TCRBV4S1A1TA0A5B7 111 aa15.15■□□□□ 0.02
SNX4-201ENST00000251775 A8MWL6 223 aa15.15■□□□□ 0.02
SNX4-201ENST00000251775 TMEM177Q53S58 311 aa15.15■□□□□ 0.02
SNX4-201ENST00000251775 RNASE6Q93091 150 aaKnown RBP15.15■□□□□ 0.02
SNX4-201ENST00000251775 SOX21Q9Y651 276 aaPredicted RBP15.15■□□□□ 0.02
SNX4-201ENST00000251775 TRAV8-6A0A0B4J262 113 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 NDUFB3O43676 98 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 ZNF137PP52743 207 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 ERHP84090 104 aaKnown RBP15.14■□□□□ 0.01
SNX4-201ENST00000251775 PET117Q6UWS5 81 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 LINC00305Q7Z4B0 112 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 PDPNQ86YL7 162 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 MAP1LC3CQ9BXW4 147 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 C19orf71A6NCJ1 209 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 PGPA6NDG6 321 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 LIPFP07098 398 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 ZNF138P52744 262 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 HIST1H1AQ02539 215 aaPredicted RBP15.14■□□□□ 0.01
SNX4-201ENST00000251775 CT83Q5H943 113 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 BLNKQ8WV28 456 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 MRPL36Q9P0J6 103 aaKnown RBP15.14■□□□□ 0.01
SNX4-201ENST00000251775 RPH3ALQ9UNE2 315 aa15.14■□□□□ 0.01
SNX4-201ENST00000251775 SHISA9B4DS77 424 aa15.13■□□□□ 0.01
SNX4-201ENST00000251775 OR5AL1P0C617 328 aa15.13■□□□□ 0.01
SNX4-201ENST00000251775 FLYWCH2Q96CP2 140 aaKnown RBP15.13■□□□□ 0.01
SNX4-201ENST00000251775 MS4A6AQ9H2W1 248 aa15.13■□□□□ 0.01
SNX4-201ENST00000251775 POLEQ07864 2286 aa15.13■□□□□ 0.01
SNX4-201ENST00000251775 LOC102724200A0A096LPH7 203 aaPredicted RBP15.13■□□□□ 0.01
SNX4-201ENST00000251775 GAGE12BA1L429 117 aa15.13■□□□□ 0.01
SNX4-201ENST00000251775 E7EQL1 145 aa15.13■□□□□ 0.01
SNX4-201ENST00000251775 FOXE3Q13461 319 aa15.13■□□□□ 0.01
SNX4-201ENST00000251775 NDFIP1Q9BT67 221 aa15.13■□□□□ 0.01
SNX4-201ENST00000251775 P01737 135 aa15.12■□□□□ 0.01
SNX4-201ENST00000251775 LOXP28300 417 aaPredicted RBP15.12■□□□□ 0.01
SNX4-201ENST00000251775 OR10X1Q8NGY0 326 aa15.12■□□□□ 0.01
SNX4-201ENST00000251775 PTPRZ1P23471 2315 aaPredicted RBP15.12■□□□□ 0.01
SNX4-201ENST00000251775 CGB1A6NKQ9 187 aa15.12■□□□□ 0.01
SNX4-201ENST00000251775 H0Y8G0 127 aa15.12■□□□□ 0.01
SNX4-201ENST00000251775 WT1-ASQ06250 92 aa15.12■□□□□ 0.01
SNX4-201ENST00000251775 FAM71F2Q6NXP2 309 aa15.12■□□□□ 0.01
SNX4-201ENST00000251775 LHFPL4Q7Z7J7 247 aa15.12■□□□□ 0.01
SNX4-201ENST00000251775 INS-IGF2F8WCM5 200 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 DLX6P56179 175 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 RBPMS2Q6ZRY4 209 aaKnown RBP15.11■□□□□ 0.01
SNX4-201ENST00000251775 THAP8Q8NA92 274 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 PMCHL2Q9BQD1 86 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 DYNLRB1Q9NP97 96 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 ZNF492Q9P255 531 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 DMXL2Q8TDJ6 3036 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 LTAP01374 205 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 C10orf55Q5SWW7 151 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 C2orf91Q6ZV80 131 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 TMEM167AQ8TBQ9 72 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 GFRA4Q9GZZ7 299 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 CSTL1Q9H114 145 aa15.11■□□□□ 0.01
SNX4-201ENST00000251775 VSTM5A8MXK1 200 aa15.1■□□□□ 0.01
SNX4-201ENST00000251775 GPR183P32249 361 aa15.1■□□□□ 0.01
SNX4-201ENST00000251775 LINC01545Q5VT33 79 aa15.1■□□□□ 0.01
SNX4-201ENST00000251775 LINC00311Q8N616 119 aa15.1■□□□□ 0.01
SNX4-201ENST00000251775 OR4C13Q8NGP0 309 aa15.1■□□□□ 0.01
SNX4-201ENST00000251775 PEF1Q9UBV8 284 aaKnown RBP15.1■□□□□ 0.01
SNX4-201ENST00000251775 NAV3Q8IVL0 2385 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms