RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 Q5PR19 223 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 GDF5OSQ5U4N7 250 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 CCL17Q92583 94 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 DOPEY2Q9Y3R5 2298 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 INS-IGF2F8WCM5 200 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 KLK10O43240 276 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 HTR1DP28221 377 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 PRSS33Q8NF86 280 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 TMEM167AQ8TBQ9 72 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 TSKUQ8WUA8 353 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 C7orf69Q9H7B7 122 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 TMEM167BQ9NRX6 74 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 JKAMPQ9P055 326 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 AMMECR1Q9Y4X0 333 aaPredicted RBP8.12□□□□□ -1.11
COPB1-201ENST00000249923 SMIM27A0A1W2PRY6 76 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 LEPROTL1O95214 131 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 C8orf88P0DMB2 117 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 IGLL1P15814 213 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 NHLH1Q02575 133 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 NPIPB3Q92617 1050 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 C20orf144Q9BQM9 153 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 CHRDL1Q9BU40 450 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 COL12A1Q99715 3063 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 TRAV9-1A0A075B6T8 112 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 PGPA6NDG6 321 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 DLL1O00548 723 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 AMY1AP04745 511 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 OR5AL1P0C617 328 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 LINC00614P0C842 121 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 TMEM108Q6UXF1 575 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 LINC00173Q6ZV60 143 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 FXYD5Q96DB9 178 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 ABHD17AQ96GS6 310 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 GAL3ST2Q9H3Q3 398 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 SAP30LQ9HAJ7 183 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 S4R3C0 116 aa8.11□□□□□ -1.11
COPB1-201ENST00000249923 A0A1W2PRE2 83 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 C16orf97H3BN30 126 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 GOSR1O95249 250 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 MYCNOSP40205 109 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 MEF2CQ06413 473 aaPredicted RBP8.1□□□□□ -1.11
COPB1-201ENST00000249923 PLGLAQ15195 96 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 TEX43Q6ZNM6 134 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 ZNF329Q86UD4 541 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 MBD6Q96DN6 1003 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 GNB1LQ9BYB4 327 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 RAB9BQ9NP90 201 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 IGLC7A0M8Q6 106 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 SHISA9B4DS77 424 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 ISLRO14498 428 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 SLC25A17O43808 307 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 Q0VG73 95 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 OR1L4Q8NGR5 311 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 PRSS3P2Q8NHM4 247 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 OSTCQ9NRP0 149 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 SSUH2Q9Y2M2 353 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 TRAV8-1A0A0A6YYK1 113 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 HLA-DQA1P01909 254 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 OR4C13Q8NGP0 309 aa8.1□□□□□ -1.11
COPB1-201ENST00000249923 PPIAL4EA0A075B759 164 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 PPIAL4FP0DN26 164 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 TNFRSF1AP19438 455 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 COL8A1P27658 744 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 NMUP48645 174 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 UBE2V1Q13404 147 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 TMEM30BQ3MIR4 351 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 LINC00322Q6ZN03 302 aaPredicted RBP8.09□□□□□ -1.11
COPB1-201ENST00000249923 CACNG8Q8WXS5 425 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 NKX6-3A6NJ46 265 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 E7EQL1 145 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 CRYABP02511 175 aaKnown RBP8.09□□□□□ -1.11
COPB1-201ENST00000249923 PRRX1P54821 245 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 TMEM155Q4W5P6 130 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 IGFBPL1Q8WX77 278 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 PAXXQ9BUH6 204 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 GSX1Q9H4S2 264 aaPredicted RBP8.09□□□□□ -1.11
COPB1-201ENST00000249923 TCRBV4S1A1TA0A5B7 111 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 PRNTQ86SH4 94 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 THAP8Q8NA92 274 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 OR10X1Q8NGY0 326 aa8.09□□□□□ -1.11
COPB1-201ENST00000249923 RNASE6Q93091 150 aaKnown RBP8.09□□□□□ -1.11
COPB1-201ENST00000249923 LYNX1G3V0Z9 82 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 NDUFB8O95169 186 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 IGHV1-8P0DP01 117 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 LYNX1P0DP58 116 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 PVRIGQ6DKI7 326 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 SLC25A34Q6PIV7 304 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 NIT1Q86X76 327 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 PDPNQ86YL7 162 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 LINC00311Q8N616 119 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 TMEM70Q9BUB7 260 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 COX11Q9Y6N1 276 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 ARHGAP32A7KAX9 2087 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 IGHV3OR16-8A0A075B7F1 116 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 GAGE10A6NGK3 116 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 P01737 135 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 SMIM15Q7Z3B0 74 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 C19orf24Q9BVV8 132 aa8.08□□□□□ -1.12
COPB1-201ENST00000249923 MRPL32Q9BYC8 188 aaKnown RBP8.08□□□□□ -1.12
COPB1-201ENST00000249923 MEGF9Q9H1U4 602 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms