RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 SMIM27A0A1W2PRY6 76 aa17.07■□□□□ 0.32
CLN6-201ENST00000249806 NUDT10Q8NFP7 164 aa17.07■□□□□ 0.32
CLN6-201ENST00000249806 NUDT11Q96G61 164 aa17.07■□□□□ 0.32
CLN6-201ENST00000249806 AJUBAQ96IF1 538 aa17.07■□□□□ 0.32
CLN6-201ENST00000249806 FLNCQ14315 2725 aa17.07■□□□□ 0.32
CLN6-201ENST00000249806 IGLV11-55A0A075B6I3 123 aa17.06■□□□□ 0.32
CLN6-201ENST00000249806 ZNF491Q8N8L2 437 aa17.06■□□□□ 0.32
CLN6-201ENST00000249806 KLF12Q9Y4X4 402 aa17.06■□□□□ 0.32
CLN6-201ENST00000249806 NPIPB5A8MRT5 1133 aa17.06■□□□□ 0.32
CLN6-201ENST00000249806 OVOL3O00110 214 aa17.06■□□□□ 0.32
CLN6-201ENST00000249806 UBE2E1P51965 193 aa17.06■□□□□ 0.32
CLN6-201ENST00000249806 BCL6BQ8N143 479 aaPredicted RBP17.06■□□□□ 0.32
CLN6-201ENST00000249806 GBGT1Q8N5D6 347 aa17.06■□□□□ 0.32
CLN6-201ENST00000249806 IL4P05112 153 aa17.05■□□□□ 0.32
CLN6-201ENST00000249806 MRPL54Q6P161 138 aaKnown RBP17.05■□□□□ 0.32
CLN6-201ENST00000249806 TTC9CQ8N5M4 171 aa17.05■□□□□ 0.32
CLN6-201ENST00000249806 C5orf17Q8NAS9 161 aa17.05■□□□□ 0.32
CLN6-201ENST00000249806 ATG101Q9BSB4 218 aa17.05■□□□□ 0.32
CLN6-201ENST00000249806 PRDM13Q9H4Q3 707 aa17.05■□□□□ 0.32
CLN6-201ENST00000249806 MAP1AP78559 2803 aaPredicted RBP17.05■□□□□ 0.32
CLN6-201ENST00000249806 GNG7O60262 68 aa17.05■□□□□ 0.32
CLN6-201ENST00000249806 EXOC3-AS1Q8N2X6 119 aa17.05■□□□□ 0.32
CLN6-201ENST00000249806 GNB1LQ9BYB4 327 aa17.05■□□□□ 0.32
CLN6-201ENST00000249806 C7orf69Q9H7B7 122 aa17.05■□□□□ 0.32
CLN6-201ENST00000249806 TOMM40O96008 361 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 IGHV3-23P01764 117 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 IGHV4-39P01824 125 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 TCRAP04437 139 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 HIST1H1EP10412 219 aaKnown RBP17.04■□□□□ 0.32
CLN6-201ENST00000249806 EGR2P11161 476 aaPredicted RBP17.04■□□□□ 0.32
CLN6-201ENST00000249806 SAA4P35542 130 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 TMEM18Q96B42 140 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 RNF125Q96EQ8 232 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 C17orf77Q96MU5 243 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 TMEM14CQ9P0S9 112 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 TP53TG3Q9ULZ0 132 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 IGHV7-81A0A0B4J1V7 117 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 F8W735 103 aaPredicted RBP17.04■□□□□ 0.32
CLN6-201ENST00000249806 GATCO43716 136 aaKnown RBP17.04■□□□□ 0.32
CLN6-201ENST00000249806 GZMBP10144 247 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 JOSD1Q15040 202 aaPredicted RBP17.04■□□□□ 0.32
CLN6-201ENST00000249806 FAM231DQ6ZW35 169 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 Q8N9W7 124 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 SHANK2-AS3Q9BTD1 123 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 NAT8BQ9UHF3 227 aa17.04■□□□□ 0.32
CLN6-201ENST00000249806 TBL2Q9Y4P3 447 aaKnown RBP17.04■□□□□ 0.32
CLN6-201ENST00000249806 FAM106CPP0CH98 169 aa17.03■□□□□ 0.32
CLN6-201ENST00000249806 MBD6Q96DN6 1003 aa17.03■□□□□ 0.32
CLN6-201ENST00000249806 TMEM68Q96MH6 324 aa17.03■□□□□ 0.32
CLN6-201ENST00000249806 GPR82Q96P67 336 aa17.03■□□□□ 0.32
CLN6-201ENST00000249806 ACACBO00763 2458 aa17.03■□□□□ 0.32
CLN6-201ENST00000249806 NDUFB8O95169 186 aa17.02■□□□□ 0.32
CLN6-201ENST00000249806 PRB4P10163 310 aaPredicted RBP17.02■□□□□ 0.32
CLN6-201ENST00000249806 CRISP2P16562 243 aa17.02■□□□□ 0.32
CLN6-201ENST00000249806 RAB4BP61018 213 aa17.02■□□□□ 0.32
CLN6-201ENST00000249806 TMEM136Q6ZRR5 245 aa17.02■□□□□ 0.32
CLN6-201ENST00000249806 H3BRN7 92 aa17.02■□□□□ 0.32
CLN6-201ENST00000249806 OR2J3O76001 311 aa17.02■□□□□ 0.32
CLN6-201ENST00000249806 FCGR2BP31994 310 aaPredicted RBP17.02■□□□□ 0.32
CLN6-201ENST00000249806 MFAP4P55083 255 aa17.02■□□□□ 0.32
CLN6-201ENST00000249806 LINC00322Q6ZN03 302 aaPredicted RBP17.02■□□□□ 0.32
CLN6-201ENST00000249806 MLST8Q9BVC4 326 aa17.02■□□□□ 0.32
CLN6-201ENST00000249806 SPG11Q96JI7 2443 aa17.02■□□□□ 0.31
CLN6-201ENST00000249806 ABCA2Q9BZC7 2435 aa17.02■□□□□ 0.31
CLN6-201ENST00000249806 TRAV8-1A0A0A6YYK1 113 aa17.01■□□□□ 0.31
CLN6-201ENST00000249806 TRBV9A0A0B4J1U6 114 aa17.01■□□□□ 0.31
CLN6-201ENST00000249806 USF2Q15853 346 aaPredicted RBP17.01■□□□□ 0.31
CLN6-201ENST00000249806 KIAA1644Q3SXP7 199 aa17.01■□□□□ 0.31
CLN6-201ENST00000249806 Q56UQ5 140 aa17.01■□□□□ 0.31
CLN6-201ENST00000249806 PIP4P2Q8N4L2 257 aa17.01■□□□□ 0.31
CLN6-201ENST00000249806 HSPB9Q9BQS6 159 aa17.01■□□□□ 0.31
CLN6-201ENST00000249806 OTORQ9NRC9 128 aa17.01■□□□□ 0.31
CLN6-201ENST00000249806 WI2-2373I1.2A0A1W2PRP0 233 aa17.01■□□□□ 0.31
CLN6-201ENST00000249806 IZUMO1RA6ND01 250 aa17.01■□□□□ 0.31
CLN6-201ENST00000249806 F2Z2F3 143 aa17.01■□□□□ 0.31
CLN6-201ENST00000249806 BPIFA4PQ86YQ2 179 aa17.01■□□□□ 0.31
CLN6-201ENST00000249806 LINC00310P59036 64 aa17■□□□□ 0.31
CLN6-201ENST00000249806 RPL19P84098 196 aaKnown RBP17■□□□□ 0.31
CLN6-201ENST00000249806 GRAMD2BQ96HH9 432 aa17■□□□□ 0.31
CLN6-201ENST00000249806 FMC1Q96HJ9 113 aa17■□□□□ 0.31
CLN6-201ENST00000249806 C21orf62Q9NYP8 219 aa17■□□□□ 0.31
CLN6-201ENST00000249806 TRAV30A0A087WSZ9 112 aa17■□□□□ 0.31
CLN6-201ENST00000249806 LTAP01374 205 aa17■□□□□ 0.31
CLN6-201ENST00000249806 WDR73Q6P4I2 378 aa17■□□□□ 0.31
CLN6-201ENST00000249806 AMY1AP04745 511 aa16.99■□□□□ 0.31
CLN6-201ENST00000249806 NUP35Q8NFH5 326 aa16.99■□□□□ 0.31
CLN6-201ENST00000249806 USP9XQ93008 2570 aaPredicted RBP16.99■□□□□ 0.31
CLN6-201ENST00000249806 CRYBG3Q68DQ2 2970 aa16.99■□□□□ 0.31
CLN6-201ENST00000249806 TRBV19A0A075B6N1 114 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 OR2T8A6NH00 312 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 IGLC2P0DOY2 106 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 Q71RC1 249 aaPredicted RBP16.98■□□□□ 0.31
CLN6-201ENST00000249806 CMTM2Q8TAZ6 248 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 C1RLQ9NZP8 487 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 UTP20O75691 2785 aaKnown RBP16.98■□□□□ 0.31
CLN6-201ENST00000249806 MT-ND6P03923 174 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 BRS3P32247 399 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 CTAG1AP78358 180 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 C9orf152Q5JTZ5 239 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 DNLZQ5SXM8 178 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms