RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 V9GYV3 84 aa18■□□□□ 0.47
HOXD9-201ENST00000249499 HECTD1Q9ULT8 2610 aa18■□□□□ 0.47
HOXD9-201ENST00000249499 A0A0U1RQK1 487 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 ZNF320A2RRD8 509 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 HIST1H1EP10412 219 aaKnown RBP17.99■□□□□ 0.47
HOXD9-201ENST00000249499 RANP62826 216 aaKnown RBP17.99■□□□□ 0.47
HOXD9-201ENST00000249499 TMEM183BQ1AE95 376 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 KLF17Q5JT82 389 aaPredicted RBP17.99■□□□□ 0.47
HOXD9-201ENST00000249499 ZNF600Q6ZNG1 722 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 ZNF491Q8N8L2 437 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 FAM110DQ8TAY7 271 aaPredicted RBP17.99■□□□□ 0.47
HOXD9-201ENST00000249499 RNF125Q96EQ8 232 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 C21orf62Q9NYP8 219 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 PITPNC1Q9UKF7 332 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 KLF12Q9Y4X4 402 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 AKAP6Q13023 2319 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 IGHV1-69DA0A0B4J2H0 117 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 H3BRN7 92 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 IGHV1-69P01742 117 aa17.99■□□□□ 0.47
HOXD9-201ENST00000249499 CLEC12BQ2HXU8 276 aa17.98■□□□□ 0.47
HOXD9-201ENST00000249499 RPEL1Q2QD12 228 aa17.98■□□□□ 0.47
HOXD9-201ENST00000249499 VN1R17PQ8TDU5 208 aa17.98■□□□□ 0.47
HOXD9-201ENST00000249499 PGPA6NDG6 321 aa17.97■□□□□ 0.47
HOXD9-201ENST00000249499 SLC25A5P05141 298 aaKnown RBP17.97■□□□□ 0.47
HOXD9-201ENST00000249499 RPL19P84098 196 aaKnown RBP17.97■□□□□ 0.47
HOXD9-201ENST00000249499 FAM231DQ6ZW35 169 aa17.97■□□□□ 0.47
HOXD9-201ENST00000249499 BLNKQ8WV28 456 aa17.97■□□□□ 0.47
HOXD9-201ENST00000249499 ATG101Q9BSB4 218 aa17.97■□□□□ 0.47
HOXD9-201ENST00000249499 OTORQ9NRC9 128 aa17.97■□□□□ 0.47
HOXD9-201ENST00000249499 NBPF19A0A087WUL8 3843 aa17.97■□□□□ 0.47
HOXD9-201ENST00000249499 WNK2Q9Y3S1 2297 aa17.97■□□□□ 0.47
HOXD9-201ENST00000249499 S100A2P29034 98 aa17.97■□□□□ 0.47
HOXD9-201ENST00000249499 RPL15P61313 204 aaKnown RBP17.97■□□□□ 0.47
HOXD9-201ENST00000249499 OR5I1Q13606 314 aa17.97■□□□□ 0.47
HOXD9-201ENST00000249499 COA6Q5JTJ3 125 aaKnown RBP17.97■□□□□ 0.47
HOXD9-201ENST00000249499 BPIFA4PQ86YQ2 179 aa17.97■□□□□ 0.47
HOXD9-201ENST00000249499 GAR1Q9NY12 217 aaKnown RBP17.97■□□□□ 0.47
HOXD9-201ENST00000249499 F8W735 103 aaPredicted RBP17.96■□□□□ 0.47
HOXD9-201ENST00000249499 MEGF9Q9H1U4 602 aa17.96■□□□□ 0.47
HOXD9-201ENST00000249499 Q9H3A6 140 aa17.96■□□□□ 0.47
HOXD9-201ENST00000249499 IL4P05112 153 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 Q56UQ5 140 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 IBA57Q5T440 356 aaKnown RBP17.95■□□□□ 0.46
HOXD9-201ENST00000249499 BAGE2Q86Y30 109 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 HSPB9Q9BQS6 159 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 IGHV4-30-2A0A087WSY4 118 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 A1L4Q6 167 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 SLC17A3O00476 420 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 NDUFB8O95169 186 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 UBE2G1P62253 170 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 LYPD1Q8N2G4 141 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 FMC1Q96HJ9 113 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 CHRDL1Q9BU40 450 aa17.95■□□□□ 0.46
HOXD9-201ENST00000249499 TACC2O95359 2948 aa17.94■□□□□ 0.46
HOXD9-201ENST00000249499 LEMD1Q68G75 181 aa17.94■□□□□ 0.46
HOXD9-201ENST00000249499 HIST3H2BBQ8N257 126 aa17.94■□□□□ 0.46
HOXD9-201ENST00000249499 C5orf56Q8N8D9 126 aa17.94■□□□□ 0.46
HOXD9-201ENST00000249499 OR4F17Q8NGA8 305 aa17.94■□□□□ 0.46
HOXD9-201ENST00000249499 ASH1LQ9NR48 2969 aaKnown RBP17.93■□□□□ 0.46
HOXD9-201ENST00000249499 OR2J3O76001 311 aa17.93■□□□□ 0.46
HOXD9-201ENST00000249499 MGST1P10620 155 aaKnown RBP17.93■□□□□ 0.46
HOXD9-201ENST00000249499 S100A7P31151 101 aa17.93■□□□□ 0.46
HOXD9-201ENST00000249499 LINC00479Q96M42 142 aa17.93■□□□□ 0.46
HOXD9-201ENST00000249499 PSMG3-AS1Q96PY0 264 aa17.93■□□□□ 0.46
HOXD9-201ENST00000249499 ZNF586Q9NXT0 402 aa17.93■□□□□ 0.46
HOXD9-201ENST00000249499 FBXL7Q9UJT9 491 aa17.93■□□□□ 0.46
HOXD9-201ENST00000249499 MOB4Q9Y3A3 225 aa17.93■□□□□ 0.46
HOXD9-201ENST00000249499 TRAPPC1Q9Y5R8 145 aa17.93■□□□□ 0.46
HOXD9-201ENST00000249499 CENPEQ02224 2701 aa17.93■□□□□ 0.46
HOXD9-201ENST00000249499 COX19Q49B96 90 aa17.92■□□□□ 0.46
HOXD9-201ENST00000249499 UNQ5815/PRO19632Q6UWF5 114 aa17.92■□□□□ 0.46
HOXD9-201ENST00000249499 TRBV9A0A0B4J1U6 114 aa17.92■□□□□ 0.46
HOXD9-201ENST00000249499 IFITM10A6NMD0 228 aa17.92■□□□□ 0.46
HOXD9-201ENST00000249499 ATP6V0E1O15342 81 aa17.92■□□□□ 0.46
HOXD9-201ENST00000249499 TCRAP04437 139 aa17.92■□□□□ 0.46
HOXD9-201ENST00000249499 MSMBP08118 114 aa17.92■□□□□ 0.46
HOXD9-201ENST00000249499 IGLC2P0DOY2 106 aa17.92■□□□□ 0.46
HOXD9-201ENST00000249499 TMEM183AQ8IXX5 376 aa17.92■□□□□ 0.46
HOXD9-201ENST00000249499 GPR82Q96P67 336 aa17.92■□□□□ 0.46
HOXD9-201ENST00000249499 TMUB1Q9BVT8 246 aa17.92■□□□□ 0.46
HOXD9-201ENST00000249499 RNASE7Q9H1E1 156 aaKnown RBP17.92■□□□□ 0.46
HOXD9-201ENST00000249499 FLNBO75369 2602 aaKnown RBP17.91■□□□□ 0.46
HOXD9-201ENST00000249499 TRBV19A0A075B6N1 114 aa17.91■□□□□ 0.46
HOXD9-201ENST00000249499 GNG5P63218 68 aa17.91■□□□□ 0.46
HOXD9-201ENST00000249499 CELSR2Q9HCU4 2923 aa17.91■□□□□ 0.46
HOXD9-201ENST00000249499 MED13LQ71F56 2210 aa17.91■□□□□ 0.46
HOXD9-201ENST00000249499 TRAV40A0A0B4J280 105 aa17.9■□□□□ 0.46
HOXD9-201ENST00000249499 SLC25A16P16260 332 aa17.9■□□□□ 0.46
HOXD9-201ENST00000249499 GATA3P23771 443 aa17.9■□□□□ 0.46
HOXD9-201ENST00000249499 PDE6HQ13956 83 aa17.9■□□□□ 0.46
HOXD9-201ENST00000249499 TRBV6-1A0A0K0K1D8 114 aa17.9■□□□□ 0.46
HOXD9-201ENST00000249499 SMIM27A0A1W2PRY6 76 aa17.9■□□□□ 0.46
HOXD9-201ENST00000249499 MRPS12O15235 138 aaKnown RBP17.9■□□□□ 0.46
HOXD9-201ENST00000249499 COX6B1P14854 86 aa17.9■□□□□ 0.46
HOXD9-201ENST00000249499 CRIP2P52943 208 aaPredicted RBP17.9■□□□□ 0.46
HOXD9-201ENST00000249499 S100A12P80511 92 aa17.9■□□□□ 0.46
HOXD9-201ENST00000249499 TRAV34A0A0B4J273 112 aa17.89■□□□□ 0.45
HOXD9-201ENST00000249499 B4DSR2 109 aa17.89■□□□□ 0.45
HOXD9-201ENST00000249499 CTSGP08311 255 aa17.89■□□□□ 0.45
HOXD9-201ENST00000249499 USF2Q15853 346 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms