RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ITPR2Q14571 2701 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 TRAV5A0A0B4J249 113 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 H3BQ15 152 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 BMPR1BO00238 502 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 IGHG4P01861 327 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 GPR183P32249 361 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 ATP5G3P48201 142 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 Q8N2B8 174 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 C11orf52Q96A22 123 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 FXYD5Q96DB9 178 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 TVP23CQ96ET8 276 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 CHRDL1Q9BU40 450 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 YAE1D1Q9NRH1 226 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 YTHDF2Q9Y5A9 579 aaKnown RBP11.03□□□□□ -0.64
SDF2-201ENST00000247020 IGHV3-23P01764 117 aa11.02□□□□□ -0.65
SDF2-201ENST00000247020 CLEC3BP05452 202 aa11.02□□□□□ -0.65
SDF2-201ENST00000247020 GP9P14770 177 aa11.02□□□□□ -0.65
SDF2-201ENST00000247020 RAB9AP51151 201 aa11.02□□□□□ -0.65
SDF2-201ENST00000247020 CEBPGP53567 150 aa11.02□□□□□ -0.65
SDF2-201ENST00000247020 ATRAIDQ6UW56 229 aa11.02□□□□□ -0.65
SDF2-201ENST00000247020 BPIFA4PQ86YQ2 179 aa11.02□□□□□ -0.65
SDF2-201ENST00000247020 RPUSD4Q96CM3 377 aaKnown RBP11.02□□□□□ -0.65
SDF2-201ENST00000247020 PARLQ9H300 379 aa11.02□□□□□ -0.65
SDF2-201ENST00000247020 ZNF702PQ9H963 129 aa11.02□□□□□ -0.65
SDF2-201ENST00000247020 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.01□□□□□ -0.65
SDF2-201ENST00000247020 ZNF727A8MUV8 499 aa11.01□□□□□ -0.65
SDF2-201ENST00000247020 B4DEV8 164 aa11.01□□□□□ -0.65
SDF2-201ENST00000247020 SCO1O75880 301 aa11.01□□□□□ -0.65
SDF2-201ENST00000247020 OR10J4P0C629 311 aa11.01□□□□□ -0.65
SDF2-201ENST00000247020 SLC35B1P78383 322 aa11.01□□□□□ -0.65
SDF2-201ENST00000247020 USF2Q15853 346 aaPredicted RBP11.01□□□□□ -0.65
SDF2-201ENST00000247020 AWAT1Q58HT5 328 aa11.01□□□□□ -0.65
SDF2-201ENST00000247020 ZNF343Q6P1L6 599 aa11.01□□□□□ -0.65
SDF2-201ENST00000247020 CLEC19AQ6UXS0 136 aa11.01□□□□□ -0.65
SDF2-201ENST00000247020 SMIM7Q9BQ49 75 aa11.01□□□□□ -0.65
SDF2-201ENST00000247020 NAT8Q9UHE5 227 aa11.01□□□□□ -0.65
SDF2-201ENST00000247020 RABAC1Q9UI14 185 aa11.01□□□□□ -0.65
SDF2-201ENST00000247020 PUS1Q9Y606 427 aaKnown RBP eCLIP11.01□□□□□ -0.65
SDF2-201ENST00000247020 FLNAP21333 2647 aaKnown RBP11.01□□□□□ -0.65
SDF2-201ENST00000247020 PYYP10082 97 aa11□□□□□ -0.65
SDF2-201ENST00000247020 PF4V1P10720 104 aa11□□□□□ -0.65
SDF2-201ENST00000247020 PSMB8P28062 276 aa11□□□□□ -0.65
SDF2-201ENST00000247020 RPL15P61313 204 aaKnown RBP11□□□□□ -0.65
SDF2-201ENST00000247020 IL17RELQ6ZVW7 336 aa11□□□□□ -0.65
SDF2-201ENST00000247020 ZFAND3Q9H8U3 227 aa11□□□□□ -0.65
SDF2-201ENST00000247020 SDF2L1Q9HCN8 221 aa11□□□□□ -0.65
SDF2-201ENST00000247020 ZFHX3Q15911 3703 aa11□□□□□ -0.65
SDF2-201ENST00000247020 CCDC168Q8NDH2 2452 aa11□□□□□ -0.65
SDF2-201ENST00000247020 ZNF469Q96JG9 3925 aaPredicted RBP10.99□□□□□ -0.65
SDF2-201ENST00000247020 ZNF98A6NK75 572 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 CLDN34H7C241 214 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 M0R036 132 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 ELANEP08246 267 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 NBEAP1P0C6P0 100 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 HIST1H1EP10412 219 aaKnown RBP10.99□□□□□ -0.65
SDF2-201ENST00000247020 ZNF414Q96IQ9 312 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 AKAP9Q99996 3911 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 CSMD1Q96PZ7 3565 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 A0A087WWC5 75 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 NPPCP23582 126 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 ARL3P36405 182 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 FOXE3Q13461 319 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 KIAA0141Q14154 515 aaPredicted RBP10.99□□□□□ -0.65
SDF2-201ENST00000247020 TMEM241Q24JQ0 296 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 TEX38Q6PEX7 206 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 TOMM20LQ6UXN7 152 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 OR4F17Q8NGA8 305 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 PRELID1Q9Y255 219 aa10.99□□□□□ -0.65
SDF2-201ENST00000247020 C7orf77A4D0Y5 90 aa10.98□□□□□ -0.65
SDF2-201ENST00000247020 GGTLC3B5MD39 225 aa10.98□□□□□ -0.65
SDF2-201ENST00000247020 MYCNOSP40205 109 aa10.98□□□□□ -0.65
SDF2-201ENST00000247020 BTN1A1Q13410 526 aa10.98□□□□□ -0.65
SDF2-201ENST00000247020 PDE6HQ13956 83 aa10.98□□□□□ -0.65
SDF2-201ENST00000247020 LYPD1Q8N2G4 141 aa10.98□□□□□ -0.65
SDF2-201ENST00000247020 RNF152Q8N8N0 203 aa10.98□□□□□ -0.65
SDF2-201ENST00000247020 GPR82Q96P67 336 aa10.98□□□□□ -0.65
SDF2-201ENST00000247020 GNB4Q9HAV0 340 aa10.98□□□□□ -0.65
SDF2-201ENST00000247020 FASNP49327 2511 aaKnown RBP10.98□□□□□ -0.65
SDF2-201ENST00000247020 SCO2A0A1W2PP80 73 aa10.97□□□□□ -0.65
SDF2-201ENST00000247020 C9JCJ5 164 aa10.97□□□□□ -0.65
SDF2-201ENST00000247020 NDUFA4O00483 81 aa10.97□□□□□ -0.65
SDF2-201ENST00000247020 MRPS12O15235 138 aaKnown RBP10.97□□□□□ -0.65
SDF2-201ENST00000247020 NDUFB4O95168 129 aa10.97□□□□□ -0.65
SDF2-201ENST00000247020 RPL7P18124 248 aaKnown RBP10.97□□□□□ -0.65
SDF2-201ENST00000247020 SUMO1P63165 101 aaKnown RBP10.97□□□□□ -0.65
SDF2-201ENST00000247020 ZNF674Q2M3X9 581 aa10.97□□□□□ -0.65
SDF2-201ENST00000247020 TMEM95Q3KNT9 176 aa10.97□□□□□ -0.65
SDF2-201ENST00000247020 MYOZ3Q8TDC0 251 aa10.97□□□□□ -0.65
SDF2-201ENST00000247020 HIST1H2BAQ96A08 127 aa10.97□□□□□ -0.65
SDF2-201ENST00000247020 KLK15Q9H2R5 256 aa10.97□□□□□ -0.65
SDF2-201ENST00000247020 RPS10P5Q9NQ39 176 aa10.97□□□□□ -0.65
SDF2-201ENST00000247020 LY96Q9Y6Y9 160 aa10.97□□□□□ -0.65
SDF2-201ENST00000247020 DNAJC9-AS1A6NH13 148 aa10.96□□□□□ -0.65
SDF2-201ENST00000247020 DNASE2O00115 360 aaPredicted RBP10.96□□□□□ -0.65
SDF2-201ENST00000247020 IGLC2P0DOY2 106 aa10.96□□□□□ -0.65
SDF2-201ENST00000247020 C1orf194Q5T5A4 169 aa10.96□□□□□ -0.65
SDF2-201ENST00000247020 LEMD1Q68G75 181 aa10.96□□□□□ -0.65
SDF2-201ENST00000247020 ZNF329Q86UD4 541 aa10.96□□□□□ -0.65
SDF2-201ENST00000247020 C2CD4CQ8TF44 421 aa10.96□□□□□ -0.65
SDF2-201ENST00000247020 TUBA4BQ9H853 241 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms