RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 TMEM95Q3KNT9 176 aa14.56□□□□□ -0.08
TNFSF9-201ENST00000245817 MORN5Q5VZ52 161 aa14.56□□□□□ -0.08
TNFSF9-201ENST00000245817 ZNF600Q6ZNG1 722 aa14.56□□□□□ -0.08
TNFSF9-201ENST00000245817 CYB561D1Q8N8Q1 229 aa14.56□□□□□ -0.08
TNFSF9-201ENST00000245817 CCDC140Q96MF4 163 aa14.56□□□□□ -0.08
TNFSF9-201ENST00000245817 CHRDL1Q9BU40 450 aa14.56□□□□□ -0.08
TNFSF9-201ENST00000245817 SLC25A39Q9BZJ4 359 aaPredicted RBP14.56□□□□□ -0.08
TNFSF9-201ENST00000245817 ANK3Q12955 4377 aaKnown RBP14.56□□□□□ -0.08
TNFSF9-201ENST00000245817 TGOLN2O43493 480 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 OR10J4P0C629 311 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 RAB9AP51151 201 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 RELQ04864 619 aaPredicted RBP14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 FAM167A-AS1Q96KT0 104 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 ZNF702PQ9H963 129 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 PUS1Q9Y606 427 aaKnown RBP eCLIP14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 SONP18583 2426 aaKnown RBP14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 PDE6DO43924 150 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 NDUFS6O75380 124 aaKnown RBP14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 SNAPINO95295 136 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 SRD5A1P18405 259 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 CD81P60033 236 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 CFHR3Q02985 330 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 ZNF329Q86UD4 541 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 SUN5Q8TC36 379 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 ZNF503Q96F45 646 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 RNF24Q9Y225 148 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 ARL2-SNX15V9GYD0 113 aa14.55□□□□□ -0.08
TNFSF9-201ENST00000245817 TMEM89A2RUT3 159 aa14.54□□□□□ -0.08
TNFSF9-201ENST00000245817 BMPR1BO00238 502 aa14.54□□□□□ -0.08
TNFSF9-201ENST00000245817 IGHG4P01861 327 aa14.54□□□□□ -0.08
TNFSF9-201ENST00000245817 ADMP35318 185 aa14.54□□□□□ -0.08
TNFSF9-201ENST00000245817 KIAA0141Q14154 515 aaPredicted RBP14.54□□□□□ -0.08
TNFSF9-201ENST00000245817 KLK15Q9H2R5 256 aa14.54□□□□□ -0.08
TNFSF9-201ENST00000245817 CDC42EP3Q9UKI2 254 aa14.54□□□□□ -0.08
TNFSF9-201ENST00000245817 DNAJC9-AS1A6NH13 148 aa14.53□□□□□ -0.08
TNFSF9-201ENST00000245817 FAM74A7A6NL05 159 aa14.53□□□□□ -0.08
TNFSF9-201ENST00000245817 F6UZH7 168 aa14.53□□□□□ -0.08
TNFSF9-201ENST00000245817 TMEM250H0YL14 139 aa14.53□□□□□ -0.08
TNFSF9-201ENST00000245817 GUCA2BQ16661 112 aa14.53□□□□□ -0.08
TNFSF9-201ENST00000245817 Q71RC1 249 aaPredicted RBP14.53□□□□□ -0.08
TNFSF9-201ENST00000245817 SHANK2-AS3Q9BTD1 123 aa14.53□□□□□ -0.08
TNFSF9-201ENST00000245817 PYYP10082 97 aa14.52□□□□□ -0.08
TNFSF9-201ENST00000245817 ATP5G3P48201 142 aa14.52□□□□□ -0.08
TNFSF9-201ENST00000245817 LEMD1Q68G75 181 aa14.52□□□□□ -0.08
TNFSF9-201ENST00000245817 TEX38Q6PEX7 206 aa14.52□□□□□ -0.08
TNFSF9-201ENST00000245817 ZNF418Q8TF45 676 aaPredicted RBP14.52□□□□□ -0.08
TNFSF9-201ENST00000245817 RABAC1Q9UI14 185 aa14.52□□□□□ -0.08
TNFSF9-201ENST00000245817 YTHDF2Q9Y5A9 579 aaKnown RBP14.52□□□□□ -0.08
TNFSF9-201ENST00000245817 IGHV3-35A0A0C4DH35 117 aa14.52□□□□□ -0.09
TNFSF9-201ENST00000245817 H3BRN7 92 aa14.52□□□□□ -0.09
TNFSF9-201ENST00000245817 CRYBA1P05813 215 aa14.52□□□□□ -0.09
TNFSF9-201ENST00000245817 ARL3P36405 182 aa14.52□□□□□ -0.09
TNFSF9-201ENST00000245817 USF2Q15853 346 aaPredicted RBP14.52□□□□□ -0.09
TNFSF9-201ENST00000245817 Q8N2B8 174 aa14.52□□□□□ -0.09
TNFSF9-201ENST00000245817 NIPSNAP3BQ9BS92 247 aa14.52□□□□□ -0.09
TNFSF9-201ENST00000245817 A0A1W2PRE2 83 aa14.51□□□□□ -0.09
TNFSF9-201ENST00000245817 IGHV3-11P01762 117 aa14.51□□□□□ -0.09
TNFSF9-201ENST00000245817 PSMB8P28062 276 aa14.51□□□□□ -0.09
TNFSF9-201ENST00000245817 FAM209BQ5JX69 171 aa14.51□□□□□ -0.09
TNFSF9-201ENST00000245817 BPIFA4PQ86YQ2 179 aa14.51□□□□□ -0.09
TNFSF9-201ENST00000245817 OR4X2Q8NGF9 303 aa14.51□□□□□ -0.09
TNFSF9-201ENST00000245817 NKX6-2Q9C056 277 aaPredicted RBP14.51□□□□□ -0.09
TNFSF9-201ENST00000245817 ZFHX3Q15911 3703 aa14.5□□□□□ -0.09
TNFSF9-201ENST00000245817 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.5□□□□□ -0.09
TNFSF9-201ENST00000245817 FAM181BA6NEQ2 426 aa14.5□□□□□ -0.09
TNFSF9-201ENST00000245817 PPP5D1E7EU14 171 aa14.5□□□□□ -0.09
TNFSF9-201ENST00000245817 TOMM20LQ6UXN7 152 aa14.5□□□□□ -0.09
TNFSF9-201ENST00000245817 ZNF727A8MUV8 499 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 CLDN34H7C241 214 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 M0R036 132 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 ELANEP08246 267 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 NBEAP1P0C6P0 100 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 FOXE3Q13461 319 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 ZNF674Q2M3X9 581 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 FAM74A3Q4VXF1 159 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 FAM90A2PQ658T7 463 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 LCNL1Q6ZST4 164 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 OR4F17Q8NGA8 305 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 RPUSD4Q96CM3 377 aaKnown RBP14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 FXYD5Q96DB9 178 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 TMEM14CQ9P0S9 112 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 ZNF98A6NK75 572 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 ZNF343Q6P1L6 599 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 BLNKQ8WV28 456 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 SMIM7Q9BQ49 75 aa14.49□□□□□ -0.09
TNFSF9-201ENST00000245817 H3BQ15 152 aa14.48□□□□□ -0.09
TNFSF9-201ENST00000245817 SCO1O75880 301 aa14.48□□□□□ -0.09
TNFSF9-201ENST00000245817 GP9P14770 177 aa14.48□□□□□ -0.09
TNFSF9-201ENST00000245817 SUMO1P63165 101 aaKnown RBP14.48□□□□□ -0.09
TNFSF9-201ENST00000245817 CLRN3Q8NCR9 226 aa14.48□□□□□ -0.09
TNFSF9-201ENST00000245817 INAFM1C9JVW0 142 aa14.47□□□□□ -0.09
TNFSF9-201ENST00000245817 HIST1H1EP10412 219 aaKnown RBP14.47□□□□□ -0.09
TNFSF9-201ENST00000245817 TVP23CQ96ET8 276 aa14.47□□□□□ -0.09
TNFSF9-201ENST00000245817 METTL26Q96S19 204 aa14.47□□□□□ -0.09
TNFSF9-201ENST00000245817 PARLQ9H300 379 aa14.47□□□□□ -0.09
TNFSF9-201ENST00000245817 ESM1Q9NQ30 184 aa14.47□□□□□ -0.09
TNFSF9-201ENST00000245817 MTORP42345 2549 aa14.47□□□□□ -0.09
TNFSF9-201ENST00000245817 IGHV3OR16-8A0A075B7F1 116 aa14.46□□□□□ -0.09
TNFSF9-201ENST00000245817 GGCTO75223 188 aaKnown RBP14.46□□□□□ -0.09
TNFSF9-201ENST00000245817 RPL15P61313 204 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms