RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 FAM222BQ8WU58 562 aa9.46□□□□□ -0.89
SOX9-201ENST00000245479 NCOR1P1Q9H4R4 102 aa9.46□□□□□ -0.89
SOX9-201ENST00000245479 TNFRSF19Q9NS68 423 aa9.46□□□□□ -0.89
SOX9-201ENST00000245479 DAZAP2Q15038 168 aaPredicted RBP9.46□□□□□ -0.9
SOX9-201ENST00000245479 ZNF146Q15072 292 aa9.46□□□□□ -0.9
SOX9-201ENST00000245479 WDR31Q8NA23 367 aa9.46□□□□□ -0.9
SOX9-201ENST00000245479 FER1L6-AS1Q8NA97 138 aa9.46□□□□□ -0.9
SOX9-201ENST00000245479 NUP35Q8NFH5 326 aa9.46□□□□□ -0.9
SOX9-201ENST00000245479 OR9G1Q8NH87 305 aa9.46□□□□□ -0.9
SOX9-201ENST00000245479 H3BVH4 76 aa9.46□□□□□ -0.9
SOX9-201ENST00000245479 LINC00305Q7Z4B0 112 aa9.46□□□□□ -0.9
SOX9-201ENST00000245479 V9GYV3 84 aa9.46□□□□□ -0.9
SOX9-201ENST00000245479 TRAV5A0A0B4J249 113 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 FAM231BA6NCW3 169 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 SLC25A17O43808 307 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 ESDP10768 282 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 ZNF134P52741 427 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 GOLT1AQ6ZVE7 132 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 GPR82Q96P67 336 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 SLC25A10Q9UBX3 287 aaPredicted RBP9.45□□□□□ -0.9
SOX9-201ENST00000245479 JPT1Q9UK76 154 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 IGLC7A0M8Q6 106 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 DLL1O00548 723 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 MOSP00540 346 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 NBEAP1P0C6P0 100 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 SRSF9Q13242 221 aaKnown RBP eCLIP9.45□□□□□ -0.9
SOX9-201ENST00000245479 MSMPQ1L6U9 139 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 RBPMS2Q6ZRY4 209 aaKnown RBP9.45□□□□□ -0.9
SOX9-201ENST00000245479 GCSAMQ8N6F7 178 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 MS4A6AQ9H2W1 248 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 CSMD1Q96PZ7 3565 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 ABCA12Q86UK0 2595 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 CPAMD8Q8IZJ3 1885 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 IGKV1-16P04430 117 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 ZNF474Q6S9Z5 364 aaPredicted RBP9.45□□□□□ -0.9
SOX9-201ENST00000245479 OR5A1Q8NGJ0 315 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 HIST1H4GQ99525 98 aa9.45□□□□□ -0.9
SOX9-201ENST00000245479 NHP2Q9NX24 153 aaKnown RBP9.45□□□□□ -0.9
SOX9-201ENST00000245479 TRBV20OR9-2A0A075B6H5 130 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 IGKV1D-17A0A075B6S4 117 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 A0A1B0GUT8 65 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 A0A1B0GWB2 263 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 YPEL1O60688 119 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 FRMD6-AS1P0C7T7 363 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 DUTP33316 252 aaKnown RBP9.44□□□□□ -0.9
SOX9-201ENST00000245479 YPEL2Q96QA6 119 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 IFI27L2Q9H2X8 130 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 C11orf1Q9H5F2 150 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 RNF7Q9UBF6 113 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 TNRC6AQ8NDV7 1962 aaKnown RBP9.44□□□□□ -0.9
SOX9-201ENST00000245479 ORM1P02763 201 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 RBX1P62877 108 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 FAM90A1Q86YD7 464 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 TRAV8-6A0A0B4J262 113 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 CACNG7P62955 275 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 GUSBP1Q15486 140 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 CHCHD1Q96BP2 118 aaKnown RBP9.44□□□□□ -0.9
SOX9-201ENST00000245479 CSTL1Q9H114 145 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 CUBNO60494 3623 aa9.44□□□□□ -0.9
SOX9-201ENST00000245479 HIVEP3Q5T1R4 2406 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 SAA2-SAA4A0A096LPE2 208 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 K7EN84 100 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 SAA2P0DJI9 122 aaPredicted RBP9.43□□□□□ -0.9
SOX9-201ENST00000245479 Q1RN00 199 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 GP6Q9HCN6 339 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 TRBV6-6A0A0A6YYG2 114 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 C19orf67A6NJJ6 358 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 K7EP13 123 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 DIAPH2-AS1Q14236 149 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 ODF3L1Q8IXM7 274 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 ONECUT1Q9UBC0 465 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 GFRA3O60609 400 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 BVES-AS1Q5T3Y7 98 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 TMUB1Q9BVT8 246 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 UFC1Q9Y3C8 167 aa9.43□□□□□ -0.9
SOX9-201ENST00000245479 KIR3DS1Q14943 382 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 TWIST1Q15672 202 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 SAMD5Q5TGI4 173 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 SPACA3Q8IXA5 215 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 HIGD1AQ9Y241 93 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 IQCF6A8MYZ5 107 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 SAP30O75446 220 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 WNT2P09544 360 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 BSPH1Q075Z2 132 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 MORN2Q502X0 79 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 RASL11BQ9BPW5 248 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 IGHV3OR16-13A0A075B7E8 117 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 IGHV3-74A0A0B4J1X5 117 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 TMEM189A5PLL7 270 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 C15orf61A6NNL5 157 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 ZNF788Q6ZQV5 615 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 OR52E5Q8NH55 327 aa9.42□□□□□ -0.9
SOX9-201ENST00000245479 SOX21Q9Y651 276 aaPredicted RBP9.42□□□□□ -0.9
SOX9-201ENST00000245479 PPIAL4EA0A075B759 164 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 PPIAL4FP0DN26 164 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 HSD52Q0P140 79 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 TIMM23BQ5SRD1 257 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 LYRM7Q5U5X0 104 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 FAM71F2Q6NXP2 309 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms