RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 H3BTX0 84 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 IL4P05112 153 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 MSMBP08118 114 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 IGHV4-38-2P0DP08 117 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 COX6B1P14854 86 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 HOXA5P20719 270 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 CNN1P51911 297 aaKnown RBP14.48□□□□□ -0.09
HOXC11-201ENST00000243082 ERVFC1-1P60608 527 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 GNG5P63218 68 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 KLK9Q2XQG4 91 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 C5orf56Q8N8D9 126 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 KLK9Q9UKQ9 250 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 V9GYV3 84 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 A0A0U1RQK1 487 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 SH2D7A6NKC9 451 aaPredicted RBP14.48□□□□□ -0.09
HOXC11-201ENST00000243082 IGHV3-23P01764 117 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 DSCR9P59020 149 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 Q56UQ5 140 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 UNQ5815/PRO19632Q6UWF5 114 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 TMUB1Q9BVT8 246 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 MEGF9Q9H1U4 602 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 ZNF586Q9NXT0 402 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 IL36BQ9NZH7 164 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 FBXL7Q9UJT9 491 aa14.48□□□□□ -0.09
HOXC11-201ENST00000243082 EPG5Q9HCE0 2579 aa14.47□□□□□ -0.09
HOXC11-201ENST00000243082 TRAV34A0A0B4J273 112 aa14.47□□□□□ -0.09
HOXC11-201ENST00000243082 SLC25A5P05141 298 aaKnown RBP14.47□□□□□ -0.09
HOXC11-201ENST00000243082 ECSCRQ19T08 205 aa14.47□□□□□ -0.09
HOXC11-201ENST00000243082 TMEM219Q86XT9 240 aa14.47□□□□□ -0.09
HOXC11-201ENST00000243082 ZFHX3Q15911 3703 aa14.47□□□□□ -0.09
HOXC11-201ENST00000243082 MAP1AP78559 2803 aaPredicted RBP14.47□□□□□ -0.09
HOXC11-201ENST00000243082 FBN2P35556 2912 aa14.46□□□□□ -0.09
HOXC11-201ENST00000243082 A1L4Q6 167 aa14.46□□□□□ -0.09
HOXC11-201ENST00000243082 ZNF320A2RRD8 509 aa14.46□□□□□ -0.09
HOXC11-201ENST00000243082 ISLRO14498 428 aa14.46□□□□□ -0.09
HOXC11-201ENST00000243082 HIST1H1EP10412 219 aaKnown RBP14.46□□□□□ -0.09
HOXC11-201ENST00000243082 USF2Q15853 346 aaPredicted RBP14.46□□□□□ -0.09
HOXC11-201ENST00000243082 BCL6BQ8N143 479 aaPredicted RBP14.46□□□□□ -0.09
HOXC11-201ENST00000243082 TMEM68Q96MH6 324 aa14.46□□□□□ -0.09
HOXC11-201ENST00000243082 RNASE7Q9H1E1 156 aaKnown RBP14.46□□□□□ -0.09
HOXC11-201ENST00000243082 Q9H3A6 140 aa14.46□□□□□ -0.09
HOXC11-201ENST00000243082 C7orf69Q9H7B7 122 aa14.46□□□□□ -0.09
HOXC11-201ENST00000243082 OSTCQ9NRP0 149 aa14.46□□□□□ -0.09
HOXC11-201ENST00000243082 HIST1H1BP16401 226 aaKnown RBP14.46□□□□□ -0.1
HOXC11-201ENST00000243082 BTF3L4Q96K17 158 aa14.46□□□□□ -0.1
HOXC11-201ENST00000243082 CTSGP08311 255 aa14.45□□□□□ -0.1
HOXC11-201ENST00000243082 FCGR2BP31994 310 aaPredicted RBP14.45□□□□□ -0.1
HOXC11-201ENST00000243082 TMEM183BQ1AE95 376 aa14.45□□□□□ -0.1
HOXC11-201ENST00000243082 ACTL10Q5JWF8 245 aa14.45□□□□□ -0.1
HOXC11-201ENST00000243082 NHLRC2Q8NBF2 726 aa14.45□□□□□ -0.1
HOXC11-201ENST00000243082 KLF12Q9Y4X4 402 aa14.45□□□□□ -0.1
HOXC11-201ENST00000243082 SOX21Q9Y651 276 aaPredicted RBP14.45□□□□□ -0.1
HOXC11-201ENST00000243082 LRRK2Q5S007 2527 aa14.45□□□□□ -0.1
HOXC11-201ENST00000243082 FAM208BQ5VWN6 2430 aa14.45□□□□□ -0.1
HOXC11-201ENST00000243082 OR2T8A6NH00 312 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 G3V318 75 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 AMY1AP04745 511 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 MGST1P10620 155 aaKnown RBP14.44□□□□□ -0.1
HOXC11-201ENST00000243082 RPL15P61313 204 aaKnown RBP14.44□□□□□ -0.1
HOXC11-201ENST00000243082 BAGE2Q86Y30 109 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 C5orf17Q8NAS9 161 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 VN1R17PQ8TDU5 208 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 TXN2Q99757 166 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 MOB4Q9Y3A3 225 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 TRBV9A0A0B4J1U6 114 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 B4DSR2 109 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 MRPS12O15235 138 aaKnown RBP14.44□□□□□ -0.1
HOXC11-201ENST00000243082 CDX1P47902 265 aaPredicted RBP14.44□□□□□ -0.1
HOXC11-201ENST00000243082 BPIFA4PQ86YQ2 179 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 HIF1ANQ9NWT6 349 aa14.44□□□□□ -0.1
HOXC11-201ENST00000243082 ZNF98A6NK75 572 aa14.43□□□□□ -0.1
HOXC11-201ENST00000243082 IFITM10A6NMD0 228 aa14.43□□□□□ -0.1
HOXC11-201ENST00000243082 IGLC2P0DOY2 106 aa14.43□□□□□ -0.1
HOXC11-201ENST00000243082 ATG101Q9BSB4 218 aa14.43□□□□□ -0.1
HOXC11-201ENST00000243082 CHRDL1Q9BU40 450 aa14.43□□□□□ -0.1
HOXC11-201ENST00000243082 OTORQ9NRC9 128 aa14.43□□□□□ -0.1
HOXC11-201ENST00000243082 CSMD2Q7Z408 3487 aa14.43□□□□□ -0.1
HOXC11-201ENST00000243082 TRAV9-1A0A075B6T8 112 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 S100A8P05109 93 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 SLC25A16P16260 332 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 ADMP35318 185 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 RPEL1Q2QD12 228 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 C15orf32Q32M92 178 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 IBA57Q5T440 356 aaKnown RBP14.42□□□□□ -0.1
HOXC11-201ENST00000243082 ZNF502Q8TBZ5 544 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 TRBV19A0A075B6N1 114 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 AVPP01185 164 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 TCRAP04437 139 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 RHOGP84095 191 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 GFI1BQ5VTD9 330 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 SGK494Q96LW2 274 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 C17orf77Q96MU5 243 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 RPH3ALQ9UNE2 315 aa14.42□□□□□ -0.1
HOXC11-201ENST00000243082 A0A096LNT2 108 aa14.41□□□□□ -0.1
HOXC11-201ENST00000243082 MEOX2P50222 304 aa14.41□□□□□ -0.1
HOXC11-201ENST00000243082 UBE2G1P62253 170 aa14.41□□□□□ -0.1
HOXC11-201ENST00000243082 EXOC3-AS1Q8N2X6 119 aa14.41□□□□□ -0.1
HOXC11-201ENST00000243082 ZNF414Q96IQ9 312 aa14.41□□□□□ -0.1
HOXC11-201ENST00000243082 OR4F17Q8NGA8 305 aa14.41□□□□□ -0.1
HOXC11-201ENST00000243082 C12orf57Q99622 126 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms