RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 ZNF415Q09FC8 603 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 SIGLEC15Q6ZMC9 328 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 AMN1Q8IY45 258 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 LYZL4Q96KX0 146 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 A0A1W2PRX2 142 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 SRD5A1P18405 259 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 TCF15Q12870 199 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 ATP1A1-AS1Q5TC04 95 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 TMEM133Q9H2Q1 129 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 SH2D1AO60880 128 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 IGHV2-70P01814 119 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 TMEM190Q8WZ59 177 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 ZDBF2Q9HCK1 2354 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 PIKFYVEQ9Y2I7 2098 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 TFF1P04155 84 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 Q0VG73 95 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 PMVKQ15126 192 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 SUMO4Q6EEV6 95 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 DTX2Q86UW9 622 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 MBNL3Q9NUK0 354 aaKnown RBP11.42□□□□□ -0.58
TARDBP-201ENST00000240185 POLEQ07864 2286 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 INTS1Q8N201 2190 aaKnown RBP11.42□□□□□ -0.58
TARDBP-201ENST00000240185 CELA3BP08861 270 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 RPL36AP83881 106 aaKnown RBP11.42□□□□□ -0.58
TARDBP-201ENST00000240185 PAX8Q06710 450 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 C14orf178Q8N769 122 aaPredicted RBP11.42□□□□□ -0.58
TARDBP-201ENST00000240185 RPL36ALQ969Q0 106 aaKnown RBP11.42□□□□□ -0.58
TARDBP-201ENST00000240185 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
TARDBP-201ENST00000240185 RPL15P61313 204 aaKnown RBP11.41□□□□□ -0.58
TARDBP-201ENST00000240185 C10orf55Q5SWW7 151 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 CCL19Q99731 98 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 IGLC2P0DOY2 106 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 IGLC3P0DOY3 106 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 NEGR1Q7Z3B1 354 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 LY6G5BQ8NDX9 201 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 C1orf162Q8NEQ5 155 aaPredicted RBP11.41□□□□□ -0.58
TARDBP-201ENST00000240185 GVINP1Q7Z2Y8 2422 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 C17orf100A8MU93 164 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 AZU1P20160 251 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 RCHY1Q96PM5 261 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 SPANXDQ9BXN6 97 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 GAGE12JA6NER3 117 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 GAGE7O76087 117 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 GAGE12FP0CL80 117 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 GAGE12GP0CL81 117 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 GAGE12IP0CL82 117 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 GAGE4Q13068 117 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 RBMY1FQ15415 496 aaKnown RBP11.41□□□□□ -0.58
TARDBP-201ENST00000240185 TMEM14EPQ6UXP3 125 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 MIA3Q5JRA6 1907 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 CHD5Q8TDI0 1954 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 K7EP34 96 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 MST1P26927 711 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 Q8TAT8 98 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 UBL5Q9BZL1 73 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 C7orf69Q9H7B7 122 aa11.41□□□□□ -0.58
TARDBP-201ENST00000240185 ANKRD31Q8N7Z5 1873 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 TRAV13-1A0A0B4J241 112 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 A0A1B0GUS0 222 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 BSPH1Q075Z2 132 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 ADAMTSL1Q8N6G6 1762 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 SRRM4A7MD48 611 aaKnown RBP11.4□□□□□ -0.58
TARDBP-201ENST00000240185 HAMPP81172 84 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 NMSQ5H8A3 153 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 FAM166AQ6J272 317 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 SIGLEC12Q96PQ1 595 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 PRADC1Q9BSG0 188 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 TMEM126AQ9H061 195 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 TIAF1O95411 115 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 GAGE1Q13065 139 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 MORN5Q5VZ52 161 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 COLCA1Q6ZS62 124 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 SMRP1Q8NCR6 262 aa11.4□□□□□ -0.58
TARDBP-201ENST00000240185 NEU4Q8WWR8 484 aaPredicted RBP11.4□□□□□ -0.58
TARDBP-201ENST00000240185 J3QRE1 110 aa11.4□□□□□ -0.59
TARDBP-201ENST00000240185 IGHV1-2P23083 117 aa11.39□□□□□ -0.59
TARDBP-201ENST00000240185 PPP1R32Q7Z5V6 425 aa11.39□□□□□ -0.59
TARDBP-201ENST00000240185 TIMM23O14925 209 aa11.39□□□□□ -0.59
TARDBP-201ENST00000240185 C3orf36Q3SXR2 165 aa11.39□□□□□ -0.59
TARDBP-201ENST00000240185 RALGAPA1Q6GYQ0 2036 aa11.39□□□□□ -0.59
TARDBP-201ENST00000240185 C5orf67F2Z3F1 127 aa11.39□□□□□ -0.59
TARDBP-201ENST00000240185 C1orf43Q9BWL3 253 aa11.39□□□□□ -0.59
TARDBP-201ENST00000240185 CADP27708 2225 aa11.39□□□□□ -0.59
TARDBP-201ENST00000240185 FOXF2Q12947 444 aa11.38□□□□□ -0.59
TARDBP-201ENST00000240185 ERCC8Q13216 396 aa11.38□□□□□ -0.59
TARDBP-201ENST00000240185 HAPLN4Q86UW8 402 aa11.38□□□□□ -0.59
TARDBP-201ENST00000240185 SRSF8Q9BRL6 282 aaKnown RBP11.38□□□□□ -0.59
TARDBP-201ENST00000240185 IGKV1-5P01602 117 aa11.38□□□□□ -0.59
TARDBP-201ENST00000240185 SAP25Q8TEE9 199 aa11.38□□□□□ -0.59
TARDBP-201ENST00000240185 B5MCH6 92 aa11.38□□□□□ -0.59
TARDBP-201ENST00000240185 UTF1Q5T230 341 aa11.38□□□□□ -0.59
TARDBP-201ENST00000240185 RBM3P98179 157 aaKnown RBP11.38□□□□□ -0.59
TARDBP-201ENST00000240185 C18orf32Q8TCD1 76 aa11.38□□□□□ -0.59
TARDBP-201ENST00000240185 IGKV1-12A0A0C4DH73 117 aa11.37□□□□□ -0.59
TARDBP-201ENST00000240185 A0A1B0GWJ7 208 aa11.37□□□□□ -0.59
TARDBP-201ENST00000240185 IGKV1D-12P01611 117 aa11.37□□□□□ -0.59
TARDBP-201ENST00000240185 ZNF114Q8NC26 417 aa11.37□□□□□ -0.59
TARDBP-201ENST00000240185 TGFBR3LH3BV60 316 aa11.37□□□□□ -0.59
TARDBP-201ENST00000240185 TMEM258P61165 79 aa11.37□□□□□ -0.59
TARDBP-201ENST00000240185 TCTEX1D4Q5JR98 221 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms