RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 NTN3O00634 580 aaPredicted RBP10.97□□□□□ -0.65
NEK4-201ENST00000233027 FREM3P0C091 2139 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 C3orf79P0CE67 100 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 C15orf32Q32M92 178 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 CKS1BP61024 79 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 SMKR1H3BMG3 65 aa10.96□□□□□ -0.65
NEK4-201ENST00000233027 MLANAQ16655 118 aa10.96□□□□□ -0.65
NEK4-201ENST00000233027 MS4A6AQ9H2W1 248 aa10.96□□□□□ -0.65
NEK4-201ENST00000233027 GAGE13Q4V321 117 aa10.96□□□□□ -0.65
NEK4-201ENST00000233027 ZNF474Q6S9Z5 364 aaPredicted RBP10.96□□□□□ -0.65
NEK4-201ENST00000233027 TRAV8-1A0A0A6YYK1 113 aa10.96□□□□□ -0.65
NEK4-201ENST00000233027 SEC11AP67812 179 aa10.96□□□□□ -0.65
NEK4-201ENST00000233027 C3orf36Q3SXR2 165 aa10.96□□□□□ -0.65
NEK4-201ENST00000233027 H0YJW9 148 aa10.96□□□□□ -0.66
NEK4-201ENST00000233027 SLC25A15Q9Y619 301 aa10.96□□□□□ -0.66
NEK4-201ENST00000233027 TPRP12270 2363 aaKnown RBP10.96□□□□□ -0.66
NEK4-201ENST00000233027 ZNF672Q499Z4 452 aaPredicted RBP10.95□□□□□ -0.66
NEK4-201ENST00000233027 BCL6BQ8N143 479 aaPredicted RBP10.95□□□□□ -0.66
NEK4-201ENST00000233027 ZNF664Q8N3J9 261 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 SLC25A2Q9BXI2 301 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 C15orf62A8K5M9 175 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 SLC25A48Q6ZT89 311 aaKnown RBP10.95□□□□□ -0.66
NEK4-201ENST00000233027 TMEM8BA6NDV4 472 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 A8MWV9 139 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 Q6ZRM9 215 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 TRAV41A0A0B4J266 112 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 DLEU1O43261 78 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 LYL1P12980 280 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 C9JQL5 133 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 TMEM155Q4W5P6 130 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 GAFA1Q96PS6 74 aa10.95□□□□□ -0.66
NEK4-201ENST00000233027 ARHGEF17Q96PE2 2063 aaPredicted RBP10.94□□□□□ -0.66
NEK4-201ENST00000233027 DUSP14O95147 198 aaKnown RBP10.94□□□□□ -0.66
NEK4-201ENST00000233027 SRSF4Q08170 494 aaKnown RBP10.94□□□□□ -0.66
NEK4-201ENST00000233027 YAE1D1Q9NRH1 226 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 TMEM178BH3BS89 294 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 OVOL1O14753 267 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 MPV17L2Q567V2 206 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 HS3ST6Q96QI5 342 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 PLSCR4Q9NRQ2 329 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 TRGV4A0A0C4DH28 118 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 WNT2P09544 360 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 PRTN3P24158 256 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 TPTE2P1Q5T6R2 138 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 SIP14410 1827 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 A0A1B0GUS0 222 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 ZNF329Q86UD4 541 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 LINC00479Q96M42 142 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 TRGV9Q99603 122 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 PRSS22Q9GZN4 317 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 ASXL3Q9C0F0 2248 aa10.94□□□□□ -0.66
NEK4-201ENST00000233027 WDR90Q96KV7 1748 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 TRGV11A0A075B6L2 103 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 A0A1B0GWJ7 208 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 FAM90A2PQ658T7 463 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 DOCK6Q96HP0 2047 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 PLNP26678 52 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 LY6DQ14210 128 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 MST1LQ2TV78 715 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 ADARB2-AS1A8MUL3 147 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 M0R2P5 195 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 FHL1Q13642 323 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 PSG3Q16557 428 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 TMEM249Q2WGJ8 235 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 ZNRD1Q9P1U0 126 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 ERG28Q9UKR5 140 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 CD59P13987 128 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 TNFRSF14Q92956 283 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 IGKV1D-17A0A075B6S4 117 aa10.93□□□□□ -0.66
NEK4-201ENST00000233027 NSUN5P1Q3KNT7 163 aa10.92□□□□□ -0.66
NEK4-201ENST00000233027 SPAG8Q99932 426 aaPredicted RBP10.92□□□□□ -0.66
NEK4-201ENST00000233027 SRSF6Q13247 344 aaKnown RBP10.92□□□□□ -0.66
NEK4-201ENST00000233027 RASL11AQ6T310 242 aa10.92□□□□□ -0.66
NEK4-201ENST00000233027 SYS1-DBNDD2H3BUS1 97 aa10.92□□□□□ -0.66
NEK4-201ENST00000233027 LINC00158P58513 81 aa10.92□□□□□ -0.66
NEK4-201ENST00000233027 SPSB3Q6PJ21 355 aa10.92□□□□□ -0.66
NEK4-201ENST00000233027 OR9G4Q8NGQ1 327 aa10.92□□□□□ -0.66
NEK4-201ENST00000233027 LTBP1Q14766 1721 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 ERCC8Q13216 396 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 B3GALT5-AS1P59052 145 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 LYPD2Q6UXB3 125 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 LCNL1Q6ZST4 164 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 AMN1Q8IY45 258 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 TMEM158Q8WZ71 300 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 EREGO14944 169 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 C1orf122Q6ZSJ8 110 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 CHCHD5Q9BSY4 110 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 SLC25A20O43772 301 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 RPRMLQ8N4K4 120 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 RCHY1Q96PM5 261 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 SMPXQ9UHP9 88 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 COL4A6Q14031 1691 aa10.91□□□□□ -0.66
NEK4-201ENST00000233027 ZNF876PQ49A33 203 aa10.9□□□□□ -0.66
NEK4-201ENST00000233027 BRD3OSQ6XYD6 125 aa10.9□□□□□ -0.66
NEK4-201ENST00000233027 TRBV6-6A0A0A6YYG2 114 aa10.9□□□□□ -0.66
NEK4-201ENST00000233027 IGKV1-16P04430 117 aa10.9□□□□□ -0.66
NEK4-201ENST00000233027 SPACA3Q8IXA5 215 aa10.9□□□□□ -0.66
NEK4-201ENST00000233027 SRRM4A7MD48 611 aaKnown RBP10.9□□□□□ -0.66
NEK4-201ENST00000233027 BUB1B-PAK6H3BSN5 160 aa10.9□□□□□ -0.66
NEK4-201ENST00000233027 C14orf178Q8N769 122 aaPredicted RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms