RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 KLF12Q9Y4X4 402 aa13.34□□□□□ -0.27
GAPDH-201ENST00000229239 F8P00451 2351 aa13.34□□□□□ -0.27
GAPDH-201ENST00000229239 PSG1P11464 419 aa13.33□□□□□ -0.27
GAPDH-201ENST00000229239 GP9P14770 177 aa13.33□□□□□ -0.27
GAPDH-201ENST00000229239 GFI1BQ5VTD9 330 aa13.33□□□□□ -0.27
GAPDH-201ENST00000229239 TTC9CQ8N5M4 171 aa13.33□□□□□ -0.27
GAPDH-201ENST00000229239 C5orf17Q8NAS9 161 aa13.33□□□□□ -0.27
GAPDH-201ENST00000229239 PACRGQ96M98 296 aaPredicted RBP13.33□□□□□ -0.27
GAPDH-201ENST00000229239 HIST1H2BLQ99880 126 aa13.33□□□□□ -0.27
GAPDH-201ENST00000229239 GNB1LQ9BYB4 327 aa13.33□□□□□ -0.27
GAPDH-201ENST00000229239 LPAR2Q9HBW0 351 aa13.33□□□□□ -0.27
GAPDH-201ENST00000229239 HIVEP1P15822 2718 aa13.33□□□□□ -0.27
GAPDH-201ENST00000229239 NDUFS7O75251 213 aa13.33□□□□□ -0.28
GAPDH-201ENST00000229239 FAM106CPP0CH98 169 aa13.33□□□□□ -0.28
GAPDH-201ENST00000229239 FABP4P15090 132 aa13.33□□□□□ -0.28
GAPDH-201ENST00000229239 HIST1H1BP16401 226 aaKnown RBP13.33□□□□□ -0.28
GAPDH-201ENST00000229239 CX3CL1P78423 397 aa13.33□□□□□ -0.28
GAPDH-201ENST00000229239 BAGE2Q86Y30 109 aa13.33□□□□□ -0.28
GAPDH-201ENST00000229239 ARPC1AQ92747 370 aa13.33□□□□□ -0.28
GAPDH-201ENST00000229239 MRPL27Q9P0M9 148 aaKnown RBP13.33□□□□□ -0.28
GAPDH-201ENST00000229239 IGHV3-21A0A0B4J1V1 117 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 SLC17A3O00476 420 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 TOX4O94842 621 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 TOMM40O96008 361 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 HIST1H1EP10412 219 aaKnown RBP13.32□□□□□ -0.28
GAPDH-201ENST00000229239 BRS3P32247 399 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 UBE2G1P62253 170 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 OR5I1Q13606 314 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 PYY3Q5JQD4 70 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 IGFBPL1Q8WX77 278 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 TMEM18Q96B42 140 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 ATG101Q9BSB4 218 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 PLXNB1O43157 2135 aa13.32□□□□□ -0.28
GAPDH-201ENST00000229239 SMIM27A0A1W2PRY6 76 aa13.31□□□□□ -0.28
GAPDH-201ENST00000229239 IGKV1-17P01599 117 aa13.31□□□□□ -0.28
GAPDH-201ENST00000229239 S100A7P31151 101 aa13.31□□□□□ -0.28
GAPDH-201ENST00000229239 LMO4P61968 165 aa13.31□□□□□ -0.28
GAPDH-201ENST00000229239 RASL11AQ6T310 242 aa13.31□□□□□ -0.28
GAPDH-201ENST00000229239 FMC1Q96HJ9 113 aa13.31□□□□□ -0.28
GAPDH-201ENST00000229239 GSN-AS1Q9NRJ2 163 aa13.31□□□□□ -0.28
GAPDH-201ENST00000229239 POLR3KQ9Y2Y1 108 aaPredicted RBP13.31□□□□□ -0.28
GAPDH-201ENST00000229239 SLC25A5P05141 298 aaKnown RBP13.31□□□□□ -0.28
GAPDH-201ENST00000229239 MGST1P10620 155 aaKnown RBP13.31□□□□□ -0.28
GAPDH-201ENST00000229239 TMEM11P17152 192 aa13.31□□□□□ -0.28
GAPDH-201ENST00000229239 MFAP4P55083 255 aa13.31□□□□□ -0.28
GAPDH-201ENST00000229239 LYZP61626 148 aa13.31□□□□□ -0.28
GAPDH-201ENST00000229239 RANP62826 216 aaKnown RBP13.31□□□□□ -0.28
GAPDH-201ENST00000229239 SLC25A39Q9BZJ4 359 aaPredicted RBP13.31□□□□□ -0.28
GAPDH-201ENST00000229239 OTORQ9NRC9 128 aa13.31□□□□□ -0.28
GAPDH-201ENST00000229239 MAP1AP78559 2803 aaPredicted RBP13.3□□□□□ -0.28
GAPDH-201ENST00000229239 IGLV11-55A0A075B6I3 123 aa13.3□□□□□ -0.28
GAPDH-201ENST00000229239 A0A1W2PRD5 423 aa13.3□□□□□ -0.28
GAPDH-201ENST00000229239 A0A1W2PRF3 423 aa13.3□□□□□ -0.28
GAPDH-201ENST00000229239 A0A1W2PRM7 423 aa13.3□□□□□ -0.28
GAPDH-201ENST00000229239 PGPA6NDG6 321 aa13.3□□□□□ -0.28
GAPDH-201ENST00000229239 DYNAPQ8N1N2 210 aa13.3□□□□□ -0.28
GAPDH-201ENST00000229239 LYPD1Q8N2G4 141 aa13.3□□□□□ -0.28
GAPDH-201ENST00000229239 GPR82Q96P67 336 aa13.3□□□□□ -0.28
GAPDH-201ENST00000229239 BPESC1Q9GZL8 116 aa13.3□□□□□ -0.28
GAPDH-201ENST00000229239 NCBP2LA6PVI3 153 aaKnown RBP13.29□□□□□ -0.28
GAPDH-201ENST00000229239 PDZD11Q5EBL8 140 aa13.29□□□□□ -0.28
GAPDH-201ENST00000229239 ZNF600Q6ZNG1 722 aa13.29□□□□□ -0.28
GAPDH-201ENST00000229239 TBX15Q96SF7 602 aa13.29□□□□□ -0.28
GAPDH-201ENST00000229239 TXN2Q99757 166 aa13.29□□□□□ -0.28
GAPDH-201ENST00000229239 SHANK2-AS3Q9BTD1 123 aa13.29□□□□□ -0.28
GAPDH-201ENST00000229239 ZNF705GA8MUZ8 300 aaPredicted RBP13.29□□□□□ -0.28
GAPDH-201ENST00000229239 AMBPP02760 352 aa13.29□□□□□ -0.28
GAPDH-201ENST00000229239 CD24P25063 80 aa13.29□□□□□ -0.28
GAPDH-201ENST00000229239 BPIFA4PQ86YQ2 179 aa13.29□□□□□ -0.28
GAPDH-201ENST00000229239 OR8I2Q8N0Y5 310 aa13.29□□□□□ -0.28
GAPDH-201ENST00000229239 OR5R1Q8NH85 324 aa13.29□□□□□ -0.28
GAPDH-201ENST00000229239 GRAMD2BQ96HH9 432 aa13.29□□□□□ -0.28
GAPDH-201ENST00000229239 RNASE7Q9H1E1 156 aaKnown RBP13.29□□□□□ -0.28
GAPDH-201ENST00000229239 GSX1Q9H4S2 264 aaPredicted RBP13.29□□□□□ -0.28
GAPDH-201ENST00000229239 MED13LQ71F56 2210 aa13.28□□□□□ -0.28
GAPDH-201ENST00000229239 TRBV6-1A0A0K0K1D8 114 aa13.28□□□□□ -0.28
GAPDH-201ENST00000229239 GATCO43716 136 aaKnown RBP13.28□□□□□ -0.28
GAPDH-201ENST00000229239 HLA-DRB1P01911 266 aa13.28□□□□□ -0.28
GAPDH-201ENST00000229239 FCGR2BP31994 310 aaPredicted RBP13.28□□□□□ -0.28
GAPDH-201ENST00000229239 ASPHD1Q5U4P2 390 aa13.28□□□□□ -0.28
GAPDH-201ENST00000229239 BLNKQ8WV28 456 aa13.28□□□□□ -0.28
GAPDH-201ENST00000229239 FANCD2OSQ96PS1 177 aa13.28□□□□□ -0.28
GAPDH-201ENST00000229239 MRPL18Q9H0U6 180 aaKnown RBP13.28□□□□□ -0.28
GAPDH-201ENST00000229239 Q9H3A6 140 aa13.28□□□□□ -0.28
GAPDH-201ENST00000229239 WI2-2373I1.2A0A1W2PRP0 233 aa13.27□□□□□ -0.28
GAPDH-201ENST00000229239 IZUMO1RA6ND01 250 aa13.27□□□□□ -0.28
GAPDH-201ENST00000229239 H3BRN7 92 aa13.27□□□□□ -0.28
GAPDH-201ENST00000229239 GNG7O60262 68 aa13.27□□□□□ -0.28
GAPDH-201ENST00000229239 JOSD1Q15040 202 aaPredicted RBP13.27□□□□□ -0.28
GAPDH-201ENST00000229239 KLK9Q2XQG4 91 aa13.27□□□□□ -0.28
GAPDH-201ENST00000229239 OR4F17Q8NGA8 305 aa13.27□□□□□ -0.28
GAPDH-201ENST00000229239 FAM103A1Q9BTL3 118 aaKnown RBP13.27□□□□□ -0.28
GAPDH-201ENST00000229239 KLK9Q9UKQ9 250 aa13.27□□□□□ -0.28
GAPDH-201ENST00000229239 ITPR3Q14573 2671 aa13.27□□□□□ -0.29
GAPDH-201ENST00000229239 HLA-DQA1P01909 254 aa13.27□□□□□ -0.29
GAPDH-201ENST00000229239 TCRAP04437 139 aa13.27□□□□□ -0.29
GAPDH-201ENST00000229239 CT83Q5H943 113 aa13.27□□□□□ -0.29
GAPDH-201ENST00000229239 GBGT1Q8N5D6 347 aa13.27□□□□□ -0.29
GAPDH-201ENST00000229239 ZNF491Q8N8L2 437 aa13.27□□□□□ -0.29
GAPDH-201ENST00000229239 WIPF2Q8TF74 440 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms