RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 C5orf17Q8NAS9 161 aa12.99□□□□□ -0.33
LTBR-201ENST00000228918 LAMTOR2Q9Y2Q5 125 aa12.99□□□□□ -0.33
LTBR-201ENST00000228918 F11RQ9Y624 299 aaKnown RBP12.99□□□□□ -0.33
LTBR-201ENST00000228918 IGHV1-3A0A0C4DH29 117 aa12.99□□□□□ -0.33
LTBR-201ENST00000228918 TEX22C9J3V5 150 aa12.99□□□□□ -0.33
LTBR-201ENST00000228918 TOMM40O96008 361 aa12.99□□□□□ -0.33
LTBR-201ENST00000228918 FAM87AP0C7U9 286 aa12.99□□□□□ -0.33
LTBR-201ENST00000228918 FMC1Q96HJ9 113 aa12.99□□□□□ -0.33
LTBR-201ENST00000228918 ALKBH7Q9BT30 221 aaPredicted RBP12.99□□□□□ -0.33
LTBR-201ENST00000228918 SSBP4Q9BWG4 385 aaPredicted RBP12.99□□□□□ -0.33
LTBR-201ENST00000228918 RIF1Q5UIP0 2472 aaKnown RBP12.98□□□□□ -0.33
LTBR-201ENST00000228918 LINC00322Q6ZN03 302 aaPredicted RBP12.98□□□□□ -0.33
LTBR-201ENST00000228918 C8orf46Q8TAG6 207 aa12.98□□□□□ -0.33
LTBR-201ENST00000228918 BORCS7Q96B45 105 aa12.98□□□□□ -0.33
LTBR-201ENST00000228918 PRSS22Q9GZN4 317 aa12.98□□□□□ -0.33
LTBR-201ENST00000228918 Q9H3A6 140 aa12.98□□□□□ -0.33
LTBR-201ENST00000228918 RPP21Q9H633 154 aaKnown RBP12.98□□□□□ -0.33
LTBR-201ENST00000228918 RALYQ9UKM9 306 aaKnown RBP12.98□□□□□ -0.33
LTBR-201ENST00000228918 KALRNO60229 2985 aa12.98□□□□□ -0.33
LTBR-201ENST00000228918 LTAP01374 205 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 CAMPP49913 170 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 PRB3Q04118 309 aaPredicted RBP12.97□□□□□ -0.33
LTBR-201ENST00000228918 TCF15Q12870 199 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 PPP1R27Q86WC6 154 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 GSX1Q9H4S2 264 aaPredicted RBP12.97□□□□□ -0.33
LTBR-201ENST00000228918 ZNF492Q9P255 531 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 INSIG2Q9Y5U4 225 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 APC2O95996 2303 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 POLEQ07864 2286 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 BUB1B-PAK6H3BSN5 160 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 TCRAP04437 139 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 APOBEC3AP31941 199 aaPredicted RBP12.97□□□□□ -0.33
LTBR-201ENST00000228918 GPR6P46095 362 aaPredicted RBP12.97□□□□□ -0.33
LTBR-201ENST00000228918 UBE2V1Q13404 147 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 CT83Q5H943 113 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 TCF24Q7RTU0 167 aa12.97□□□□□ -0.33
LTBR-201ENST00000228918 C19orf71A6NCJ1 209 aa12.96□□□□□ -0.33
LTBR-201ENST00000228918 H3BTX0 84 aa12.96□□□□□ -0.33
LTBR-201ENST00000228918 HSBP1O75506 76 aa12.96□□□□□ -0.33
LTBR-201ENST00000228918 CLEC7AQ9BXN2 247 aa12.96□□□□□ -0.33
LTBR-201ENST00000228918 HIGD1AQ9Y241 93 aa12.96□□□□□ -0.33
LTBR-201ENST00000228918 GVINP1Q7Z2Y8 2422 aa12.96□□□□□ -0.33
LTBR-201ENST00000228918 B9A039 149 aa12.96□□□□□ -0.34
LTBR-201ENST00000228918 IGLC1P0CG04 106 aa12.96□□□□□ -0.34
LTBR-201ENST00000228918 HNRNPA3P51991 378 aaKnown RBP12.96□□□□□ -0.34
LTBR-201ENST00000228918 PRR30Q53SZ7 412 aaPredicted RBP12.96□□□□□ -0.34
LTBR-201ENST00000228918 Q6ZN92 141 aa12.96□□□□□ -0.34
LTBR-201ENST00000228918 TXN2Q99757 166 aa12.96□□□□□ -0.34
LTBR-201ENST00000228918 HBBP68871 147 aa12.95□□□□□ -0.34
LTBR-201ENST00000228918 GTSF1Q8WW33 167 aa12.95□□□□□ -0.34
LTBR-201ENST00000228918 WNT10AQ9GZT5 417 aa12.95□□□□□ -0.34
LTBR-201ENST00000228918 DMXL2Q8TDJ6 3036 aa12.95□□□□□ -0.34
LTBR-201ENST00000228918 FAM181BA6NEQ2 426 aa12.95□□□□□ -0.34
LTBR-201ENST00000228918 A8MWL6 223 aa12.95□□□□□ -0.34
LTBR-201ENST00000228918 P01737 135 aa12.95□□□□□ -0.34
LTBR-201ENST00000228918 PSG1P11464 419 aa12.95□□□□□ -0.34
LTBR-201ENST00000228918 LYZP61626 148 aa12.95□□□□□ -0.34
LTBR-201ENST00000228918 SRSF12Q8WXF0 261 aaKnown RBP12.95□□□□□ -0.34
LTBR-201ENST00000228918 FBXL15Q9H469 300 aa12.95□□□□□ -0.34
LTBR-201ENST00000228918 PIEZO2Q9H5I5 2752 aa12.94□□□□□ -0.34
LTBR-201ENST00000228918 LYNX1G3V0Z9 82 aa12.94□□□□□ -0.34
LTBR-201ENST00000228918 M0R2Z0 102 aa12.94□□□□□ -0.34
LTBR-201ENST00000228918 LYNX1P0DP58 116 aa12.94□□□□□ -0.34
LTBR-201ENST00000228918 RNASEKQ6P5S7 137 aaKnown RBP12.94□□□□□ -0.34
LTBR-201ENST00000228918 OR2D3Q8NGH3 330 aa12.94□□□□□ -0.34
LTBR-201ENST00000228918 SOX21Q9Y651 276 aaPredicted RBP12.94□□□□□ -0.34
LTBR-201ENST00000228918 COX11Q9Y6N1 276 aa12.94□□□□□ -0.34
LTBR-201ENST00000228918 LOC105371242A0A075B767 164 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.93□□□□□ -0.34
LTBR-201ENST00000228918 I3L2K1 104 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 CD3EP07766 207 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 COX7A1P24310 79 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 Q86TA4 180 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 OTORQ9NRC9 128 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 TMEM14CQ9P0S9 112 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 MRPS16Q9Y3D3 137 aaKnown RBP12.93□□□□□ -0.34
LTBR-201ENST00000228918 ABCA1O95477 2261 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 RBP4P02753 201 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 RBPJQ06330 500 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 LCN12Q6JVE5 192 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 RPEQ96AT9 228 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 URB1-AS1Q96HZ7 61 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 SLC25A39Q9BZJ4 359 aaPredicted RBP12.93□□□□□ -0.34
LTBR-201ENST00000228918 GFRA4Q9GZZ7 299 aa12.93□□□□□ -0.34
LTBR-201ENST00000228918 PMCHL1Q16048 86 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 PRR31Q5SQ13 230 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 KLHDC1Q8N7A1 406 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 ZNF738Q8NE65 137 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 OR8B3Q8NGG8 313 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 OR8B2Q96RD0 313 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 ZFHX2Q9C0A1 2572 aaPredicted RBP12.92□□□□□ -0.34
LTBR-201ENST00000228918 PPIAL4CA0A0B4J2A2 164 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 NPIPB6E9PJ23 425 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 PPIAL4GP0DN37 164 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 TSPOP30536 169 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 ATOH7Q8N100 152 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 PGLYRP4Q96LB8 373 aa12.92□□□□□ -0.34
LTBR-201ENST00000228918 C2orf70A6NJV1 201 aa12.91□□□□□ -0.34
LTBR-201ENST00000228918 RBPMS2Q6ZRY4 209 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms