RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 FABP4P15090 132 aa15.03■□□□□ -0
YBX3-201ENST00000228251 BAGE2Q86Y30 109 aa15.03■□□□□ -0
YBX3-201ENST00000228251 OR8I2Q8N0Y5 310 aa15.03■□□□□ -0
YBX3-201ENST00000228251 PIP4P2Q8N4L2 257 aa15.03■□□□□ -0
YBX3-201ENST00000228251 Q9H3A6 140 aa15.03■□□□□ -0
YBX3-201ENST00000228251 LPAR2Q9HBW0 351 aa15.03■□□□□ -0
YBX3-201ENST00000228251 TRAV30A0A087WSZ9 112 aa15.03■□□□□ -0
YBX3-201ENST00000228251 VWC2LB2RUY7 222 aa15.03■□□□□ -0
YBX3-201ENST00000228251 MGST1P10620 155 aaKnown RBP15.03■□□□□ -0
YBX3-201ENST00000228251 ADMP35318 185 aa15.03■□□□□ -0
YBX3-201ENST00000228251 PAX8Q06710 450 aa15.03■□□□□ -0
YBX3-201ENST00000228251 NHLRC2Q8NBF2 726 aa15.03■□□□□ -0
YBX3-201ENST00000228251 TMEM68Q96MH6 324 aa15.03■□□□□ -0
YBX3-201ENST00000228251 ATG101Q9BSB4 218 aa15.03■□□□□ -0
YBX3-201ENST00000228251 GSN-AS1Q9NRJ2 163 aa15.03■□□□□ -0
YBX3-201ENST00000228251 USP9XQ93008 2570 aaPredicted RBP15.02■□□□□ -0
YBX3-201ENST00000228251 CBLN1P23435 193 aa15.02□□□□□ -0.01
YBX3-201ENST00000228251 DNLZQ5SXM8 178 aa15.02□□□□□ -0.01
YBX3-201ENST00000228251 TMEM190Q8WZ59 177 aa15.02□□□□□ -0.01
YBX3-201ENST00000228251 RNF125Q96EQ8 232 aa15.02□□□□□ -0.01
YBX3-201ENST00000228251 OTORQ9NRC9 128 aa15.02□□□□□ -0.01
YBX3-201ENST00000228251 C1RLQ9NZP8 487 aa15.02□□□□□ -0.01
YBX3-201ENST00000228251 TRBV9A0A0B4J1U6 114 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 CENPVL3A0A0U1RRI6 287 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 NPFFO15130 113 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 TCRAP04437 139 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 RNF224P0DH78 156 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 IGLC2P0DOY2 106 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 FCGR2BP31994 310 aaPredicted RBP15.01□□□□□ -0.01
YBX3-201ENST00000228251 MFAP4P55083 255 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 PACRGQ96M98 296 aaPredicted RBP15.01□□□□□ -0.01
YBX3-201ENST00000228251 HSPB9Q9BQS6 159 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 H3BTX0 84 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 NDUFB8O95169 186 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 CDPF1Q6NVV7 123 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 C10orf105Q8TEF2 133 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 FAM168AQ92567 244 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 ZNF414Q96IQ9 312 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 GNB1LQ9BYB4 327 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 COL12A1Q99715 3063 aa15.01□□□□□ -0.01
YBX3-201ENST00000228251 CSMD1Q96PZ7 3565 aa15□□□□□ -0.01
YBX3-201ENST00000228251 LTAP01374 205 aa15□□□□□ -0.01
YBX3-201ENST00000228251 BRS3P32247 399 aa15□□□□□ -0.01
YBX3-201ENST00000228251 GPR82Q96P67 336 aa15□□□□□ -0.01
YBX3-201ENST00000228251 S4R3C0 116 aa15□□□□□ -0.01
YBX3-201ENST00000228251 USP24Q9UPU5 2620 aa14.99□□□□□ -0.01
YBX3-201ENST00000228251 IGHV4-61A0A0C4DH41 118 aa14.99□□□□□ -0.01
YBX3-201ENST00000228251 IL4P05112 153 aa14.99□□□□□ -0.01
YBX3-201ENST00000228251 USF2Q15853 346 aaPredicted RBP14.99□□□□□ -0.01
YBX3-201ENST00000228251 BCL6BQ8N143 479 aaPredicted RBP14.99□□□□□ -0.01
YBX3-201ENST00000228251 NUDT10Q8NFP7 164 aa14.99□□□□□ -0.01
YBX3-201ENST00000228251 FAM110DQ8TAY7 271 aaPredicted RBP14.99□□□□□ -0.01
YBX3-201ENST00000228251 NUDT11Q96G61 164 aa14.99□□□□□ -0.01
YBX3-201ENST00000228251 FMC1Q96HJ9 113 aa14.99□□□□□ -0.01
YBX3-201ENST00000228251 MRPL18Q9H0U6 180 aaKnown RBP14.99□□□□□ -0.01
YBX3-201ENST00000228251 C21orf62Q9NYP8 219 aa14.99□□□□□ -0.01
YBX3-201ENST00000228251 TRBV19A0A075B6N1 114 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 GNG7O60262 68 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 UBE2G1P62253 170 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 CCL19Q99731 98 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 TP53TG3Q9ULZ0 132 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 SPTAN1Q13813 2472 aaKnown RBP14.98□□□□□ -0.01
YBX3-201ENST00000228251 TRBV6-1A0A0K0K1D8 114 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 IGLV2-11P01706 119 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 IER3P46695 156 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 TMEM136Q6ZRR5 245 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 BPIFA4PQ86YQ2 179 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 GBGT1Q8N5D6 347 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 THYN1Q9P016 225 aa14.98□□□□□ -0.01
YBX3-201ENST00000228251 ZNF705GA8MUZ8 300 aaPredicted RBP14.97□□□□□ -0.01
YBX3-201ENST00000228251 NDUFS8O00217 210 aa14.97□□□□□ -0.01
YBX3-201ENST00000228251 OR2J3O76001 311 aa14.97□□□□□ -0.01
YBX3-201ENST00000228251 CA1P00915 261 aaPredicted RBP14.97□□□□□ -0.01
YBX3-201ENST00000228251 COX19Q49B96 90 aa14.97□□□□□ -0.01
YBX3-201ENST00000228251 SIGLEC15Q6ZMC9 328 aa14.97□□□□□ -0.01
YBX3-201ENST00000228251 GRAMD2BQ96HH9 432 aa14.97□□□□□ -0.01
YBX3-201ENST00000228251 TXN2Q99757 166 aa14.97□□□□□ -0.01
YBX3-201ENST00000228251 PIMREGQ9BSJ6 248 aa14.97□□□□□ -0.01
YBX3-201ENST00000228251 PRSS22Q9GZN4 317 aa14.97□□□□□ -0.01
YBX3-201ENST00000228251 RNF24Q9Y225 148 aa14.97□□□□□ -0.01
YBX3-201ENST00000228251 A0A1B0GUS0 222 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 C19orf71A6NCJ1 209 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 IZUMO1RA6ND01 250 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 GATCO43716 136 aaKnown RBP14.96□□□□□ -0.01
YBX3-201ENST00000228251 MT-ND6P03923 174 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 CTSGP08311 255 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 TCL1AP56279 114 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 LINC00310P59036 64 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 VN1R17PQ8TDU5 208 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 C17orf77Q96MU5 243 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 SPOCK3Q9BQ16 436 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 ZNF492Q9P255 531 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 SVEP1Q4LDE5 3571 aa14.96□□□□□ -0.01
YBX3-201ENST00000228251 SNURFLB1AK76 121 aa14.96□□□□□ -0.02
YBX3-201ENST00000228251 WDR73Q6P4I2 378 aa14.96□□□□□ -0.02
YBX3-201ENST00000228251 LINC00322Q6ZN03 302 aaPredicted RBP14.96□□□□□ -0.02
YBX3-201ENST00000228251 Q86TA4 180 aa14.96□□□□□ -0.02
YBX3-201ENST00000228251 LYPD1Q8N2G4 141 aa14.96□□□□□ -0.02
YBX3-201ENST00000228251 EXOC3-AS1Q8N2X6 119 aa14.96□□□□□ -0.02
YBX3-201ENST00000228251 WIPF2Q8TF74 440 aaPredicted RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms