RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 TRGC2P03986 189 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 S100A8P05109 93 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 PFN1P07737 140 aaKnown RBP14.07□□□□□ -0.16
CBX1-201ENST00000225603 ETFRF1Q6IPR1 90 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 NPFFR1Q9GZQ6 430 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 DOK5Q9P104 306 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 YTHDF2Q9Y5A9 579 aaKnown RBP14.07□□□□□ -0.16
CBX1-201ENST00000225603 IGKV1D-37A0A075B6S9 117 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 TGOLN2O43493 480 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 CLN5O75503 358 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 PPIFP30405 207 aaKnown RBP14.07□□□□□ -0.16
CBX1-201ENST00000225603 OR10J1P30954 320 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 ANAPC16Q96DE5 110 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 DERL1Q9BUN8 251 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 FBXL7Q9UJT9 491 aa14.07□□□□□ -0.16
CBX1-201ENST00000225603 KLK9Q2XQG4 91 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 FAM78BQ5VT40 261 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 MIR17HGQ75NE6 70 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 NECAP1Q8NC96 275 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 TMEM116Q8NCL8 245 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 PRSS22Q9GZN4 317 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 KLK9Q9UKQ9 250 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 F8P00451 2351 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 FN1P02751 2386 aaKnown RBP14.06□□□□□ -0.16
CBX1-201ENST00000225603 TRBV9A0A0B4J1U6 114 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 GATA2P23769 480 aaPredicted RBP14.06□□□□□ -0.16
CBX1-201ENST00000225603 GALR1P47211 349 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 LINC01551Q86U37 167 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 OR5B12Q96R08 314 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 FUT9Q9Y231 359 aa14.06□□□□□ -0.16
CBX1-201ENST00000225603 FAM181BA6NEQ2 426 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 HIST1H2BKO60814 126 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 IGHV3-23P01764 117 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 HIST1H2BJP06899 126 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 HIST1H2BOP23527 126 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 HIST1H2BBP33778 126 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 HIST1H2BDP58876 126 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 HIST1H2BCP62807 126 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 RHOGP84095 191 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 CFHR3Q02985 330 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 HIST2H2BEQ16778 126 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.05□□□□□ -0.16
CBX1-201ENST00000225603 THAP8Q8NA92 274 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 HIST1H2BHQ93079 126 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 HIST1H2BNQ99877 126 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 HIST1H2BMQ99879 126 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 PYGO2Q9BRQ0 406 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 NSD1Q96L73 2696 aaPredicted RBP14.05□□□□□ -0.16
CBX1-201ENST00000225603 SCO2A0A1W2PP80 73 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 S100PP25815 95 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 ZNF90Q03938 601 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 SCGB2A2Q13296 93 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 ZNF329Q86UD4 541 aa14.05□□□□□ -0.16
CBX1-201ENST00000225603 F8W735 103 aaPredicted RBP14.04□□□□□ -0.16
CBX1-201ENST00000225603 HOXA5P20719 270 aa14.04□□□□□ -0.16
CBX1-201ENST00000225603 C10orf99Q6UWK7 81 aa14.04□□□□□ -0.16
CBX1-201ENST00000225603 OR4X1Q8NH49 305 aa14.04□□□□□ -0.16
CBX1-201ENST00000225603 ELOVL1Q9BW60 279 aa14.04□□□□□ -0.16
CBX1-201ENST00000225603 SMIM6P0DI80 62 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 HIST1H1BP16401 226 aaKnown RBP14.03□□□□□ -0.16
CBX1-201ENST00000225603 NDUFA6P56556 154 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 C15orf32Q32M92 178 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 LCNL1Q6ZST4 164 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 TCEAL7Q9BRU2 100 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 C19orf24Q9BVV8 132 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 KLK15Q9H2R5 256 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 THYN1Q9P016 225 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 PCP4L1A6NKN8 68 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 PHOX2AO14813 284 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 OR5G3P0C626 314 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 Q8N2B8 174 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 FRZBQ92765 325 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 TECRQ9NZ01 308 aaKnown RBP14.03□□□□□ -0.16
CBX1-201ENST00000225603 ZNF580Q9UK33 172 aa14.03□□□□□ -0.16
CBX1-201ENST00000225603 IGLC1P0CG04 106 aa14.02□□□□□ -0.16
CBX1-201ENST00000225603 SRD5A3Q9H8P0 318 aa14.02□□□□□ -0.16
CBX1-201ENST00000225603 C21orf62Q9NYP8 219 aa14.02□□□□□ -0.16
CBX1-201ENST00000225603 ARL2-SNX15V9GYD0 113 aa14.02□□□□□ -0.16
CBX1-201ENST00000225603 TRBV20OR9-2A0A075B6H5 130 aa14.02□□□□□ -0.17
CBX1-201ENST00000225603 IGLV1-40P01703 118 aa14.02□□□□□ -0.17
CBX1-201ENST00000225603 TRGC1P0CF51 173 aa14.02□□□□□ -0.17
CBX1-201ENST00000225603 HILS1P60008 231 aa14.02□□□□□ -0.17
CBX1-201ENST00000225603 ZNF418Q8TF45 676 aaPredicted RBP14.02□□□□□ -0.17
CBX1-201ENST00000225603 TMEM167BQ9NRX6 74 aa14.02□□□□□ -0.17
CBX1-201ENST00000225603 AURKAIP1Q9NWT8 199 aaPredicted RBP14.02□□□□□ -0.17
CBX1-201ENST00000225603 NF1P21359 2839 aa14.01□□□□□ -0.17
CBX1-201ENST00000225603 TCRBV4S1A1TA0A5B7 111 aa14.01□□□□□ -0.17
CBX1-201ENST00000225603 TRGV3P03979 118 aa14.01□□□□□ -0.17
CBX1-201ENST00000225603 S100A9P06702 114 aaKnown RBP14.01□□□□□ -0.17
CBX1-201ENST00000225603 Q6ZSV7 163 aa14.01□□□□□ -0.17
CBX1-201ENST00000225603 C11orf52Q96A22 123 aa14.01□□□□□ -0.17
CBX1-201ENST00000225603 PGPEP1LA6NFU8 196 aa14□□□□□ -0.17
CBX1-201ENST00000225603 IGKV1-17P01599 117 aa14□□□□□ -0.17
CBX1-201ENST00000225603 CDX1P47902 265 aaPredicted RBP14□□□□□ -0.17
CBX1-201ENST00000225603 MFAP4P55083 255 aa14□□□□□ -0.17
CBX1-201ENST00000225603 TIGITQ495A1 244 aa14□□□□□ -0.17
CBX1-201ENST00000225603 ZNF503Q96F45 646 aa14□□□□□ -0.17
CBX1-201ENST00000225603 UHRF2Q96PU4 802 aa14□□□□□ -0.17
CBX1-201ENST00000225603 TRGV9Q99603 122 aa14□□□□□ -0.17
CBX1-201ENST00000225603 SERTAD4Q9NUC0 356 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms