RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 FBXL15Q9H469 300 aa17.67■□□□□ 0.42
CCDC9-201ENST00000221922 EPDR1Q9UM22 224 aa17.67■□□□□ 0.42
CCDC9-201ENST00000221922 ITPR1Q14643 2758 aa17.67■□□□□ 0.42
CCDC9-201ENST00000221922 COL6A6A6NMZ7 2263 aa17.67■□□□□ 0.42
CCDC9-201ENST00000221922 TEX22C9J3V5 150 aa17.67■□□□□ 0.42
CCDC9-201ENST00000221922 ASPHD1Q5U4P2 390 aa17.67■□□□□ 0.42
CCDC9-201ENST00000221922 NIT1Q86X76 327 aa17.67■□□□□ 0.42
CCDC9-201ENST00000221922 C18orf32Q8TCD1 76 aa17.67■□□□□ 0.42
CCDC9-201ENST00000221922 MOSP00540 346 aa17.66■□□□□ 0.42
CCDC9-201ENST00000221922 PMCHP20382 165 aa17.66■□□□□ 0.42
CCDC9-201ENST00000221922 HTR1DP28221 377 aa17.66■□□□□ 0.42
CCDC9-201ENST00000221922 GDF5OSQ5U4N7 250 aa17.66■□□□□ 0.42
CCDC9-201ENST00000221922 RUSC1-AS1Q66K80 236 aa17.66■□□□□ 0.42
CCDC9-201ENST00000221922 OR11H6Q8NGC7 330 aa17.66■□□□□ 0.42
CCDC9-201ENST00000221922 SRSF12Q8WXF0 261 aaKnown RBP17.66■□□□□ 0.42
CCDC9-201ENST00000221922 TMEM68Q96MH6 324 aa17.66■□□□□ 0.42
CCDC9-201ENST00000221922 HRNRQ86YZ3 2850 aaPredicted RBP17.66■□□□□ 0.42
CCDC9-201ENST00000221922 M0R1W7 72 aa17.65■□□□□ 0.42
CCDC9-201ENST00000221922 HIST1H1EP10412 219 aaKnown RBP17.65■□□□□ 0.42
CCDC9-201ENST00000221922 CTRLP40313 264 aa17.65■□□□□ 0.42
CCDC9-201ENST00000221922 PLGLAQ15195 96 aa17.65■□□□□ 0.42
CCDC9-201ENST00000221922 RELNP78509 3460 aa17.65■□□□□ 0.42
CCDC9-201ENST00000221922 CEACAM3P40198 252 aa17.65■□□□□ 0.42
CCDC9-201ENST00000221922 GNG5P63218 68 aa17.65■□□□□ 0.42
CCDC9-201ENST00000221922 OR1B1Q8NGR6 318 aa17.65■□□□□ 0.42
CCDC9-201ENST00000221922 ITLN2Q8WWU7 325 aaPredicted RBP17.65■□□□□ 0.42
CCDC9-201ENST00000221922 DPM3Q9P2X0 92 aa17.65■□□□□ 0.42
CCDC9-201ENST00000221922 ORM2P19652 201 aa17.64■□□□□ 0.41
CCDC9-201ENST00000221922 C19orf35Q6ZS72 473 aa17.64■□□□□ 0.41
CCDC9-201ENST00000221922 HIVEP3Q5T1R4 2406 aa17.64■□□□□ 0.41
CCDC9-201ENST00000221922 A0A1W2PPR1 153 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 TIMM23O14925 209 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 HYPMO75409 117 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 OR2J3O76001 311 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 APELAP0DMC3 54 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 UBE2G1P62253 170 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 KLF5Q13887 457 aaPredicted RBP17.63■□□□□ 0.41
CCDC9-201ENST00000221922 LRBAP50851 2863 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 LOC105371242A0A075B767 164 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 SLC25A5P05141 298 aaKnown RBP17.63■□□□□ 0.41
CCDC9-201ENST00000221922 C3orf79P0CE67 100 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 PLP1P60201 277 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 ARF6P62330 175 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 ATP5L2Q7Z4Y8 100 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 MLST8Q9BVC4 326 aa17.63■□□□□ 0.41
CCDC9-201ENST00000221922 ZNF124Q15973 351 aa17.62■□□□□ 0.41
CCDC9-201ENST00000221922 GPR82Q96P67 336 aa17.62■□□□□ 0.41
CCDC9-201ENST00000221922 PGPA6NDG6 321 aa17.62■□□□□ 0.41
CCDC9-201ENST00000221922 RPLP1P05386 114 aaKnown RBP17.62■□□□□ 0.41
CCDC9-201ENST00000221922 NBEAP1P0C6P0 100 aa17.62■□□□□ 0.41
CCDC9-201ENST00000221922 PRR27Q6MZM9 219 aa17.62■□□□□ 0.41
CCDC9-201ENST00000221922 FAM19A2Q8N3H0 131 aa17.62■□□□□ 0.41
CCDC9-201ENST00000221922 BLNKQ8WV28 456 aa17.62■□□□□ 0.41
CCDC9-201ENST00000221922 A0A1B0GXF2 115 aa17.61■□□□□ 0.41
CCDC9-201ENST00000221922 HIGD1CA8MV81 97 aa17.61■□□□□ 0.41
CCDC9-201ENST00000221922 MMDQ15546 238 aa17.61■□□□□ 0.41
CCDC9-201ENST00000221922 VWC2LB2RUY7 222 aa17.6■□□□□ 0.41
CCDC9-201ENST00000221922 CNIH1O95406 144 aa17.6■□□□□ 0.41
CCDC9-201ENST00000221922 GP9P14770 177 aa17.6■□□□□ 0.41
CCDC9-201ENST00000221922 PRTN3P24158 256 aa17.6■□□□□ 0.41
CCDC9-201ENST00000221922 UQCRFS1P47985 274 aa17.6■□□□□ 0.41
CCDC9-201ENST00000221922 ALKBH7Q9BT30 221 aaPredicted RBP17.6■□□□□ 0.41
CCDC9-201ENST00000221922 NBR2O15453 112 aa17.6■□□□□ 0.41
CCDC9-201ENST00000221922 TOMM40O96008 361 aa17.6■□□□□ 0.41
CCDC9-201ENST00000221922 LDLRAD2Q5SZI1 272 aa17.6■□□□□ 0.41
CCDC9-201ENST00000221922 C5orf17Q8NAS9 161 aa17.6■□□□□ 0.41
CCDC9-201ENST00000221922 PRSS22Q9GZN4 317 aa17.6■□□□□ 0.41
CCDC9-201ENST00000221922 IGHV3-21A0A0B4J1V1 117 aa17.59■□□□□ 0.41
CCDC9-201ENST00000221922 A6NNC1 897 aa17.59■□□□□ 0.41
CCDC9-201ENST00000221922 ODF3BA8MYP8 253 aa17.59■□□□□ 0.41
CCDC9-201ENST00000221922 GNLYP22749 145 aa17.59■□□□□ 0.41
CCDC9-201ENST00000221922 SPATA45Q537H7 98 aa17.59■□□□□ 0.41
CCDC9-201ENST00000221922 CFHR4Q92496 578 aa17.59■□□□□ 0.41
CCDC9-201ENST00000221922 FMC1Q96HJ9 113 aa17.59■□□□□ 0.41
CCDC9-201ENST00000221922 DCHS2Q6V1P9 2916 aa17.59■□□□□ 0.41
CCDC9-201ENST00000221922 I3L2K1 104 aa17.59■□□□□ 0.41
CCDC9-201ENST00000221922 CT83Q5H943 113 aa17.59■□□□□ 0.41
CCDC9-201ENST00000221922 BORCS7Q96B45 105 aa17.59■□□□□ 0.41
CCDC9-201ENST00000221922 TMEM8BA6NDV4 472 aa17.58■□□□□ 0.4
CCDC9-201ENST00000221922 LTAP01374 205 aa17.58■□□□□ 0.4
CCDC9-201ENST00000221922 GPR6P46095 362 aaPredicted RBP17.58■□□□□ 0.4
CCDC9-201ENST00000221922 C1orf122Q6ZSJ8 110 aa17.58■□□□□ 0.4
CCDC9-201ENST00000221922 NPBQ8NG41 125 aa17.58■□□□□ 0.4
CCDC9-201ENST00000221922 WNT10AQ9GZT5 417 aa17.58■□□□□ 0.4
CCDC9-201ENST00000221922 ZNF492Q9P255 531 aa17.58■□□□□ 0.4
CCDC9-201ENST00000221922 HIGD1AQ9Y241 93 aa17.58■□□□□ 0.4
CCDC9-201ENST00000221922 HILPDAQ9Y5L2 63 aa17.58■□□□□ 0.4
CCDC9-201ENST00000221922 IGLC1P0CG04 106 aa17.57■□□□□ 0.4
CCDC9-201ENST00000221922 NTF3P20783 257 aa17.57■□□□□ 0.4
CCDC9-201ENST00000221922 LHFPL4Q7Z7J7 247 aa17.57■□□□□ 0.4
CCDC9-201ENST00000221922 KIR3DL3Q8N743 410 aa17.57■□□□□ 0.4
CCDC9-201ENST00000221922 RPP21Q9H633 154 aaKnown RBP17.57■□□□□ 0.4
CCDC9-201ENST00000221922 NDUFA3O95167 84 aa17.57■□□□□ 0.4
CCDC9-201ENST00000221922 ZNF25P17030 456 aaPredicted RBP17.57■□□□□ 0.4
CCDC9-201ENST00000221922 G0S2P27469 103 aa17.57■□□□□ 0.4
CCDC9-201ENST00000221922 LINC00322Q6ZN03 302 aaPredicted RBP17.57■□□□□ 0.4
CCDC9-201ENST00000221922 SGK494Q96LW2 274 aa17.57■□□□□ 0.4
CCDC9-201ENST00000221922 UBTD1Q9HAC8 227 aa17.57■□□□□ 0.4
CCDC9-201ENST00000221922 C19orf71A6NCJ1 209 aa17.56■□□□□ 0.4
CCDC9-201ENST00000221922 TCRAP04437 139 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms