RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 ZNF883P0CG24 379 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 ZNF138P52744 262 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 CFHR1Q03591 330 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 CHCHD1Q96BP2 118 aaKnown RBP12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 IGLV3-32A0A0A0MS00 114 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 TRAV3A0A0B4J244 114 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 TMEM8BA6NDV4 472 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 LINC00205P59089 165 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 MCRIP2Q9BUT9 160 aaKnown RBP12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 STRCP1A6NGW2 1772 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 TRAV1-1A0A0B4J248 108 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 MLNRO43193 412 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 IGHV1-46P01743 117 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 GUSBP1Q15486 140 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 C1orf194Q5T5A4 169 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 SLC25A48Q6ZT89 311 aaKnown RBP12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 DOCK4Q8N1I0 1966 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 A0A087X0K7 114 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 C3orf79P0CE67 100 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 DLEU1O43261 78 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 MALP21145 153 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 SPOCK3Q9BQ16 436 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 CHCHD5Q9BSY4 110 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 ERG28Q9UKR5 140 aa12.34□□□□□ -0.43
NDFIP2-201ENST00000218652 F2Z2F3 143 aa12.33□□□□□ -0.44
NDFIP2-201ENST00000218652 SLC25A20O43772 301 aa12.33□□□□□ -0.44
NDFIP2-201ENST00000218652 STHQ8IWL8 128 aa12.33□□□□□ -0.44
NDFIP2-201ENST00000218652 TRGV4A0A0C4DH28 118 aa12.33□□□□□ -0.44
NDFIP2-201ENST00000218652 TCRAP04437 139 aa12.33□□□□□ -0.44
NDFIP2-201ENST00000218652 PAX8Q06710 450 aa12.33□□□□□ -0.44
NDFIP2-201ENST00000218652 C3orf36Q3SXR2 165 aa12.33□□□□□ -0.44
NDFIP2-201ENST00000218652 PRTN3P24158 256 aa12.33□□□□□ -0.44
NDFIP2-201ENST00000218652 NPC2P61916 151 aa12.33□□□□□ -0.44
NDFIP2-201ENST00000218652 TMEM14EPQ6UXP3 125 aa12.33□□□□□ -0.44
NDFIP2-201ENST00000218652 GGTLC3B5MD39 225 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 ERVK11-1P61568 191 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 NABP1Q96AH0 204 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 C15orf32Q32M92 178 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 LYZL1Q6UWQ5 148 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 Q8TAT8 98 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 SPRR3Q9UBC9 169 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 CUL9Q8IWT3 2517 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 SRSF4Q08170 494 aaKnown RBP12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 GAGE2BQ13066 116 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 ZNF876PQ49A33 203 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 GAGE2EQ4V326 116 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 ZNF581Q9P0T4 197 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 GAGE2DQ9UEU5 116 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 ANKRD36A6QL64 1941 aa12.32□□□□□ -0.44
NDFIP2-201ENST00000218652 MGST2Q99735 147 aa12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 MS4A6AQ9H2W1 248 aa12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 DUSP14O95147 198 aaKnown RBP12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 OR9G4Q8NGQ1 327 aa12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 YLPM1P49750 1951 aaKnown RBP12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 TRAV40A0A0B4J280 105 aa12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 NTF4P34130 210 aa12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 LINC00158P58513 81 aa12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 ZC2HC1BQ5TFG8 222 aa12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 FAM166AQ6J272 317 aa12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 PEMTQ9UBM1 199 aa12.31□□□□□ -0.44
NDFIP2-201ENST00000218652 MLANAQ16655 118 aa12.3□□□□□ -0.44
NDFIP2-201ENST00000218652 TMEM219Q86XT9 240 aa12.3□□□□□ -0.44
NDFIP2-201ENST00000218652 SLC25A39Q9BZJ4 359 aaPredicted RBP12.3□□□□□ -0.44
NDFIP2-201ENST00000218652 ZNF688P0C7X2 276 aa12.3□□□□□ -0.44
NDFIP2-201ENST00000218652 CRPP02741 224 aa12.3□□□□□ -0.44
NDFIP2-201ENST00000218652 PRSS22Q9GZN4 317 aa12.3□□□□□ -0.44
NDFIP2-201ENST00000218652 SRRM4A7MD48 611 aaKnown RBP12.3□□□□□ -0.44
NDFIP2-201ENST00000218652 NDUFS8O00217 210 aa12.3□□□□□ -0.44
NDFIP2-201ENST00000218652 TPTE2P1Q5T6R2 138 aa12.3□□□□□ -0.44
NDFIP2-201ENST00000218652 ZNF664Q8N3J9 261 aa12.3□□□□□ -0.44
NDFIP2-201ENST00000218652 IGHV3-73A0A0B4J1V6 119 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 FAM90A9PA6NNJ1 464 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 LINC00473A8K010 186 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 M0R2P5 195 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 OCIAD2Q56VL3 154 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 IGFL4Q6B9Z1 124 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 Q6ZRM9 215 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 GGNQ86UU5 652 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 NUP35Q8NFH5 326 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 LINC00479Q96M42 142 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 A0A1B0GWJ7 208 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 LAGE3Q14657 143 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 TMEM249Q2WGJ8 235 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 PSME4Q14997 1843 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 LILRA1O75019 489 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 TMEM86BQ8N661 226 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 PLXNB2O15031 1838 aa12.29□□□□□ -0.44
NDFIP2-201ENST00000218652 A0A0G2JRQ6 117 aa12.28□□□□□ -0.44
NDFIP2-201ENST00000218652 ZFP36L1Q07352 338 aaKnown RBP12.28□□□□□ -0.44
NDFIP2-201ENST00000218652 GTSF1LQ9H1H1 148 aa12.28□□□□□ -0.44
NDFIP2-201ENST00000218652 YAE1D1Q9NRH1 226 aa12.28□□□□□ -0.44
NDFIP2-201ENST00000218652 ZNF672Q499Z4 452 aaPredicted RBP12.28□□□□□ -0.44
NDFIP2-201ENST00000218652 TRAV8-4A0A0B4J246 113 aa12.28□□□□□ -0.44
NDFIP2-201ENST00000218652 ATXN8Q156A1 80 aa12.28□□□□□ -0.44
NDFIP2-201ENST00000218652 IGHV2-26A0A0B4J1V2 119 aa12.28□□□□□ -0.44
NDFIP2-201ENST00000218652 THBDP07204 575 aa12.28□□□□□ -0.44
NDFIP2-201ENST00000218652 SIGLEC15Q6ZMC9 328 aa12.28□□□□□ -0.44
NDFIP2-201ENST00000218652 SLC25A2Q9BXI2 301 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms