RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 LINC00614P0C842 121 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 CEACAM8P31997 349 aaPredicted RBP12.11□□□□□ -0.47
EFNB1-201ENST00000204961 TMPRSS3P57727 454 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 TSKUQ8WUA8 353 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 CLEC7AQ9BXN2 247 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 HRNRQ86YZ3 2850 aaPredicted RBP12.11□□□□□ -0.47
EFNB1-201ENST00000204961 VWC2LB2RUY7 222 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 NDUFB8O95169 186 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 WFDC3Q8IUB2 231 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 MYO18BQ8IUG5 2567 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 TMEM178BH3BS89 294 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 AMY1AP04745 511 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 PPOXP50336 477 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 VMA21Q3ZAQ7 101 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 PIP4P1Q86T03 277 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 PPP1R14DQ9NXH3 145 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 SERTM2A0A1B0GWG4 89 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 RPL27AP46776 148 aaKnown RBP12.1□□□□□ -0.47
EFNB1-201ENST00000204961 VAMP3Q15836 100 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 C2orf83Q53S99 150 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 OR1L4Q8NGR5 311 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 ZNF257Q9Y2Q1 563 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 WASHC3Q9Y3C0 194 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 IGHV3-49A0A0A0MS15 119 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 E7EQL1 145 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 Q6ZS92 163 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 SSX8Q7RTT4 187 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 ZNF329Q86UD4 541 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 C1orf174Q8IYL3 243 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 OR4B1Q8NGF8 309 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 RNASE6Q93091 150 aaKnown RBP12.1□□□□□ -0.47
EFNB1-201ENST00000204961 RNF2Q99496 336 aa12.1□□□□□ -0.47
EFNB1-201ENST00000204961 ZNF324O75467 553 aaPredicted RBP12.09□□□□□ -0.47
EFNB1-201ENST00000204961 TBR1Q16650 682 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 FAM57AQ8TBR7 257 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 RPEQ96AT9 228 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 UQCR10Q9UDW1 63 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 IGHV3-66A0A0C4DH42 116 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 NCBP2LA6PVI3 153 aaKnown RBP12.09□□□□□ -0.47
EFNB1-201ENST00000204961 COL8A1P27658 744 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 LOXP28300 417 aaPredicted RBP12.09□□□□□ -0.47
EFNB1-201ENST00000204961 BPIFB3P59826 476 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 GAGE1Q13065 139 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 IGFL2Q6UWQ7 119 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 SPACA3Q8IXA5 215 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 IGKV1D-37A0A075B6S9 117 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 SUB1P53999 127 aaKnown RBP eCLIP12.09□□□□□ -0.47
EFNB1-201ENST00000204961 ARL6IP6Q8N6S5 226 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 OSR1Q8TAX0 266 aaPredicted RBP12.09□□□□□ -0.47
EFNB1-201ENST00000204961 C18orf32Q8TCD1 76 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 SPOCK3Q9BQ16 436 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 RAB9BQ9NP90 201 aa12.09□□□□□ -0.47
EFNB1-201ENST00000204961 hDV102S1A0JD36 115 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 BET1LQ9NYM9 111 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 USP9XQ93008 2570 aaPredicted RBP12.08□□□□□ -0.48
EFNB1-201ENST00000204961 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.08□□□□□ -0.48
EFNB1-201ENST00000204961 C9JCJ5 164 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 CRYABP02511 175 aaKnown RBP12.08□□□□□ -0.48
EFNB1-201ENST00000204961 IGLC2P0DOY2 106 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 IGLC3P0DOY3 106 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 PSG1P11464 419 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 CFHR2P36980 270 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 TCRBV4S1A1TA0A5B7 111 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 P01737 135 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 FXYD5Q96DB9 178 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 KCNS1Q96KK3 526 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 Q9H3A6 140 aa12.08□□□□□ -0.48
EFNB1-201ENST00000204961 IGHV1-69-2A0A0G2JMI3 117 aa12.07□□□□□ -0.48
EFNB1-201ENST00000204961 CHEK1O14757 476 aa12.07□□□□□ -0.48
EFNB1-201ENST00000204961 SFXN3Q9BWM7 321 aa12.07□□□□□ -0.48
EFNB1-201ENST00000204961 FAM90A9PA6NNJ1 464 aa12.07□□□□□ -0.48
EFNB1-201ENST00000204961 IGHV1-8P0DP01 117 aa12.07□□□□□ -0.48
EFNB1-201ENST00000204961 FCGR2BP31994 310 aaPredicted RBP12.07□□□□□ -0.48
EFNB1-201ENST00000204961 SELENOTP62341 195 aa12.07□□□□□ -0.48
EFNB1-201ENST00000204961 NIT1Q86X76 327 aa12.07□□□□□ -0.48
EFNB1-201ENST00000204961 C22orf15Q8WYQ4 148 aa12.07□□□□□ -0.48
EFNB1-201ENST00000204961 GNB1LQ9BYB4 327 aa12.07□□□□□ -0.48
EFNB1-201ENST00000204961 OSTCQ9NRP0 149 aa12.07□□□□□ -0.48
EFNB1-201ENST00000204961 EPDR1Q9UM22 224 aa12.07□□□□□ -0.48
EFNB1-201ENST00000204961 A0A1W2PRE2 83 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 EBLN2Q6P2I7 272 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 MUC15Q8N387 334 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 OR5AN1Q8NGI8 311 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 C11orf52Q96A22 123 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 TXNDC17Q9BRA2 123 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 MYO9AB2RTY4 2548 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 ZNF833PQ6ZTB9 187 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 SRSF12Q8WXF0 261 aaKnown RBP12.06□□□□□ -0.48
EFNB1-201ENST00000204961 IZUMO1RA6ND01 250 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 CR1LQ2VPA4 569 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 Q8N976 141 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.06□□□□□ -0.48
EFNB1-201ENST00000204961 IGF2BP2-AS1Q96M15 143 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 VPS25Q9BRG1 176 aa12.06□□□□□ -0.48
EFNB1-201ENST00000204961 FBLN7Q53RD9 439 aa12.05□□□□□ -0.48
EFNB1-201ENST00000204961 WDR73Q6P4I2 378 aa12.05□□□□□ -0.48
EFNB1-201ENST00000204961 SPATA12Q7Z6I5 190 aa12.05□□□□□ -0.48
EFNB1-201ENST00000204961 ALKBH7Q9BT30 221 aaPredicted RBP12.05□□□□□ -0.48
EFNB1-201ENST00000204961 UTP20O75691 2785 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms