RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 TTC9CQ8N5M4 171 aa20.52■□□□□ 0.88
RTN4R-201ENST00000043402 Q9H3A6 140 aa20.52■□□□□ 0.88
RTN4R-201ENST00000043402 SPINK4O60575 86 aa20.52■□□□□ 0.88
RTN4R-201ENST00000043402 IER3P46695 156 aa20.52■□□□□ 0.88
RTN4R-201ENST00000043402 TCL1AP56279 114 aa20.52■□□□□ 0.88
RTN4R-201ENST00000043402 SERTAD4Q9NUC0 356 aa20.52■□□□□ 0.88
RTN4R-201ENST00000043402 ZNF586Q9NXT0 402 aa20.52■□□□□ 0.88
RTN4R-201ENST00000043402 KLF12Q9Y4X4 402 aa20.52■□□□□ 0.88
RTN4R-201ENST00000043402 ZNF491Q8N8L2 437 aa20.51■□□□□ 0.87
RTN4R-201ENST00000043402 TMEM18Q96B42 140 aa20.51■□□□□ 0.87
RTN4R-201ENST00000043402 TMEM14CQ9P0S9 112 aa20.51■□□□□ 0.87
RTN4R-201ENST00000043402 RPH3ALQ9UNE2 315 aa20.51■□□□□ 0.87
RTN4R-201ENST00000043402 ZFHX3Q15911 3703 aa20.51■□□□□ 0.87
RTN4R-201ENST00000043402 SMIM27A0A1W2PRY6 76 aa20.51■□□□□ 0.87
RTN4R-201ENST00000043402 ZNF705GA8MUZ8 300 aaPredicted RBP20.51■□□□□ 0.87
RTN4R-201ENST00000043402 TSTD3H0UI37 97 aa20.51■□□□□ 0.87
RTN4R-201ENST00000043402 EGR2P11161 476 aaPredicted RBP20.51■□□□□ 0.87
RTN4R-201ENST00000043402 SLC35B1P78383 322 aa20.51■□□□□ 0.87
RTN4R-201ENST00000043402 Q8N9W7 124 aa20.51■□□□□ 0.87
RTN4R-201ENST00000043402 MRPL18Q9H0U6 180 aaKnown RBP20.51■□□□□ 0.87
RTN4R-201ENST00000043402 C7orf69Q9H7B7 122 aa20.51■□□□□ 0.87
RTN4R-201ENST00000043402 IGHV7-81A0A0B4J1V7 117 aa20.5■□□□□ 0.87
RTN4R-201ENST00000043402 F8W735 103 aaPredicted RBP20.5■□□□□ 0.87
RTN4R-201ENST00000043402 TOMM40O96008 361 aa20.5■□□□□ 0.87
RTN4R-201ENST00000043402 SAA4P35542 130 aa20.5■□□□□ 0.87
RTN4R-201ENST00000043402 UBE2G1P62253 170 aa20.49■□□□□ 0.87
RTN4R-201ENST00000043402 C5orf17Q8NAS9 161 aa20.49■□□□□ 0.87
RTN4R-201ENST00000043402 ATG101Q9BSB4 218 aa20.49■□□□□ 0.87
RTN4R-201ENST00000043402 LPAR2Q9HBW0 351 aa20.49■□□□□ 0.87
RTN4R-201ENST00000043402 FAM231DQ6ZW35 169 aa20.49■□□□□ 0.87
RTN4R-201ENST00000043402 TMEM256Q8N2U0 113 aa20.49■□□□□ 0.87
RTN4R-201ENST00000043402 SHANK2-AS3Q9BTD1 123 aa20.49■□□□□ 0.87
RTN4R-201ENST00000043402 PRO1933Q9H354 126 aa20.49■□□□□ 0.87
RTN4R-201ENST00000043402 SNURFLB1AK76 121 aa20.48■□□□□ 0.87
RTN4R-201ENST00000043402 FAM106CPP0CH98 169 aa20.48■□□□□ 0.87
RTN4R-201ENST00000043402 NUDT10Q8NFP7 164 aa20.48■□□□□ 0.87
RTN4R-201ENST00000043402 MBD6Q96DN6 1003 aa20.48■□□□□ 0.87
RTN4R-201ENST00000043402 RNF125Q96EQ8 232 aa20.48■□□□□ 0.87
RTN4R-201ENST00000043402 NUDT11Q96G61 164 aa20.48■□□□□ 0.87
RTN4R-201ENST00000043402 GRIFINA4D1Z8 144 aa20.48■□□□□ 0.87
RTN4R-201ENST00000043402 IL4P05112 153 aa20.48■□□□□ 0.87
RTN4R-201ENST00000043402 HIST1H1EP10412 219 aaKnown RBP20.48■□□□□ 0.87
RTN4R-201ENST00000043402 BCL6BQ8N143 479 aaPredicted RBP20.48■□□□□ 0.87
RTN4R-201ENST00000043402 ABCA2Q9BZC7 2435 aa20.47■□□□□ 0.87
RTN4R-201ENST00000043402 H3BRN7 92 aa20.47■□□□□ 0.87
RTN4R-201ENST00000043402 GNG7O60262 68 aa20.47■□□□□ 0.87
RTN4R-201ENST00000043402 NUPR1O60356 82 aa20.47■□□□□ 0.87
RTN4R-201ENST00000043402 TCRAP04437 139 aa20.47■□□□□ 0.87
RTN4R-201ENST00000043402 PRR27Q6MZM9 219 aa20.47■□□□□ 0.87
RTN4R-201ENST00000043402 PIP4P2Q8N4L2 257 aa20.47■□□□□ 0.87
RTN4R-201ENST00000043402 ZMAT5Q9UDW3 170 aaKnown RBP20.47■□□□□ 0.87
RTN4R-201ENST00000043402 WI2-2373I1.2A0A1W2PRP0 233 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 GBGT1Q8N5D6 347 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 TMEM68Q96MH6 324 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 MLST8Q9BVC4 326 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 GNB1LQ9BYB4 327 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 FLNCQ14315 2725 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 NDUFB8O95169 186 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 DDTP30046 118 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 MFAP4P55083 255 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 EXOC3-AS1Q8N2X6 119 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 GPR82Q96P67 336 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 HSPB9Q9BQS6 159 aa20.46■□□□□ 0.87
RTN4R-201ENST00000043402 TMEM8BA6NDV4 472 aa20.45■□□□□ 0.86
RTN4R-201ENST00000043402 C14orf144Q96I85 54 aa20.45■□□□□ 0.86
RTN4R-201ENST00000043402 C17orf77Q96MU5 243 aa20.45■□□□□ 0.86
RTN4R-201ENST00000043402 ZNF48Q96MX3 618 aaPredicted RBP20.45■□□□□ 0.86
RTN4R-201ENST00000043402 TP53TG3Q9ULZ0 132 aa20.45■□□□□ 0.86
RTN4R-201ENST00000043402 ACACBO00763 2458 aa20.45■□□□□ 0.86
RTN4R-201ENST00000043402 USF2Q15853 346 aaPredicted RBP20.45■□□□□ 0.86
RTN4R-201ENST00000043402 OTORQ9NRC9 128 aa20.45■□□□□ 0.86
RTN4R-201ENST00000043402 TRAV30A0A087WSZ9 112 aa20.44■□□□□ 0.86
RTN4R-201ENST00000043402 TRBV9A0A0B4J1U6 114 aa20.44■□□□□ 0.86
RTN4R-201ENST00000043402 OR2J3O76001 311 aa20.44■□□□□ 0.86
RTN4R-201ENST00000043402 IGHV3-23P01764 117 aa20.44■□□□□ 0.86
RTN4R-201ENST00000043402 TMEM136Q6ZRR5 245 aa20.44■□□□□ 0.86
RTN4R-201ENST00000043402 C21orf62Q9NYP8 219 aa20.44■□□□□ 0.86
RTN4R-201ENST00000043402 CELSR1Q9NYQ6 3014 aa20.44■□□□□ 0.86
RTN4R-201ENST00000043402 HLA-DRB1P01911 266 aa20.44■□□□□ 0.86
RTN4R-201ENST00000043402 MRPL54Q6P161 138 aaKnown RBP20.44■□□□□ 0.86
RTN4R-201ENST00000043402 C1RLQ9NZP8 487 aa20.44■□□□□ 0.86
RTN4R-201ENST00000043402 LTAP01374 205 aa20.43■□□□□ 0.86
RTN4R-201ENST00000043402 IGLC2P0DOY2 106 aa20.43■□□□□ 0.86
RTN4R-201ENST00000043402 CACNA1BQ00975 2339 aa20.43■□□□□ 0.86
RTN4R-201ENST00000043402 LINC00322Q6ZN03 302 aaPredicted RBP20.43■□□□□ 0.86
RTN4R-201ENST00000043402 BPIFA4PQ86YQ2 179 aa20.43■□□□□ 0.86
RTN4R-201ENST00000043402 FMC1Q96HJ9 113 aa20.43■□□□□ 0.86
RTN4R-201ENST00000043402 CENPVL3A0A0U1RRI6 287 aa20.42■□□□□ 0.86
RTN4R-201ENST00000043402 IZUMO1RA6ND01 250 aa20.42■□□□□ 0.86
RTN4R-201ENST00000043402 NPFFO15130 113 aa20.42■□□□□ 0.86
RTN4R-201ENST00000043402 MRPS12O15235 138 aaKnown RBP20.42■□□□□ 0.86
RTN4R-201ENST00000043402 Q56UQ5 140 aa20.42■□□□□ 0.86
RTN4R-201ENST00000043402 SMIM12Q96EX1 92 aa20.42■□□□□ 0.86
RTN4R-201ENST00000043402 TRBV19A0A075B6N1 114 aa20.42■□□□□ 0.86
RTN4R-201ENST00000043402 PAX1P15863 534 aa20.42■□□□□ 0.86
RTN4R-201ENST00000043402 FCGR2BP31994 310 aaPredicted RBP20.42■□□□□ 0.86
RTN4R-201ENST00000043402 BRS3P32247 399 aa20.42■□□□□ 0.86
RTN4R-201ENST00000043402 NAT8BQ9UHF3 227 aa20.42■□□□□ 0.86
RTN4R-201ENST00000043402 POLR3KQ9Y2Y1 108 aaPredicted RBP20.42■□□□□ 0.86
RTN4R-201ENST00000043402 TRAV8-1A0A0A6YYK1 113 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms