RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Plcxd2B2RXA1 340 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Ccl17F6R5P4 103 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Ear14F6YUX7 155 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Rnase2O35291 155 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Rnase2bO35292 155 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Tcf21O35437 179 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Il11P47873 199 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Ear1P97426 155 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Slc25a35Q5SWT3 300 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr43Q7TRX1 313 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr403Q7TRX2 313 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 YbeyQ8CAV0 164 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Q8CDS7 251 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Pth2Q91W27 100 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Chrdl1Q920C1 447 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Q9CQM1 111 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Smim8Q9CQQ0 97 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Xrcc3Q9CXE6 349 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Ndufb8Q9D6J5 186 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 GrinaQ9ESF4 345 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm29049A0A087WSM5 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Igkv12-89A0A0G2JGW8 112 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 4930435E12RikA6X8Z9 381 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr1220F7BL62 311 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm20815J3KMI0 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm20914J3QME2 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm21118J3QPK8 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Hist1h1aP43275 213 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Isoc2aP85094 206 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Clec12bQ149M0 275 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm9Q3UKW5 162 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 BB287469Q3UT53 144 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm813Q3UWK9 176 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm20909Q5FWB5 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm20852Q5M8R5 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm20917Q62457 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm20809Q62458 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm20865Q62460 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm21292Q78EE2 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr1204Q7TR10 309 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm20738Q810R8 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Thyn1Q91YJ3 226 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm20806Q9D9T3 227 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Smdt1Q9DB10 107 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Nova1Q9JKN6 507 aaKnown RBP9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Kcnip3Q9QXT8 256 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Slc35d1A2AKQ0 355 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm12887B1AVM1 119 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr102B2RT33 308 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm15440D3Z3P4 90 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm9376G3UW68 176 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Fpr2O88536 351 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 P01798 113 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Hbb-yP02104 147 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Rbp2Q08652 134 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Fbxo7Q3U7U3 523 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Cd200r1lQ6XJV6 249 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr1396Q7TQS8 315 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Prrg4Q8BGN6 226 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Pgam5Q8BX10 288 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr1384Q8VFA8 318 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr56Q8VGD6 315 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Slurp1Q9Z0K7 110 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Zfhx4Q9JJN2 3550 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm3285A0A1W2P7U0 201 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm4175D3YTW8 314 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm20918J3QN17 227 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Vmn1r114L7N226 321 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Vmn1r126L7N2C8 321 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 P01746 140 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 GzmaP11032 260 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Rps16P14131 146 aaKnown RBP9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 RbpjP31266 526 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Mbd6Q3TY92 1003 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Fam222bQ6P539 562 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Abhd12Q99LR1 398 aaKnown RBP9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Reg4Q9D8G5 157 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Wnt16Q9QYS1 364 aa9.17□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Ighv5-12A0A075B5Q4 117 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Ighv1-42A0A0A6YY38 117 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Trav7-5A0A0G2JFX6 112 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Csn1s2bP02664 143 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Npy1rQ04573 382 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Prrx2Q06348 247 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Rps19bp1Q8C6B9 143 aaKnown RBP9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Nup35Q8R4R6 325 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 TctaQ8VEA7 122 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Cysltr2Q920A1 309 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Mrpl27Q99N92 148 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Cst10Q9JM84 148 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Cnot1Q6ZQ08 2375 aaKnown RBP9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr418A0A140T8J6 310 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 H2-M10.1O19443 331 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 P2rx6O54803 389 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Acrv1P50289 261 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm12253Q5NC48 229 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Znrf2Q71FD5 238 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Ifna12Q80SS5 189 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr186Q8VEX5 309 aa9.16□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Nkg7Q99PA5 165 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms