RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Olfr470Q8VF65 314 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr484Q8VFD3 321 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr206Q8VGP9 306 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr961Q9EQ84 314 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Sp5Q9JHX2 398 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 TracA0A075B662 137 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 P01630 113 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Nkpd1Q0VF94 599 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Slc39a7Q31125 476 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Sdr39u1Q5M8N4 308 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr25Q7TRD6 313 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Arhgef17Q80U35 2057 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Abca7Q91V24 2159 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr789A0A1L1SV77 312 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gm14408E9Q6B9 136 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Sult2a4L7N245 285 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Zfp663Q6NXM6 656 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Cep41Q99NF3 373 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 4933407L21RikQ9D476 131 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Dnajb12Q9QYI4 376 aaKnown RBP13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr467L7N455 308 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Eif5a2Q8BGY2 153 aaKnown RBP13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Tmem100Q9CQG9 134 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Hdhd3Q9CYW4 251 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Alkbh7Q9D6Z0 221 aa13.16□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gm5890A0A140LI04 305 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Nudt10P0C027 164 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Nudt11P0C028 164 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 C5ar1P30993 351 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Cdk2P97377 346 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Zfp72Q0VFY0 435 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Tbrg1Q3UB74 406 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr875Q7TRE5 310 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Rab40cQ8VHQ4 281 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Zfp958Q99LG7 467 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Immp1lQ9CQU8 166 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Rnase6Q9D244 153 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 4931428L18RikQ9D4S9 127 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Trav5-4A0A075B652 114 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr753-ps1A0A140LHN3 164 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Arl16B1ATY8 173 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gm12887B1AVM1 119 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Sult2a5K7N6K9 285 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gm10192Q3V0S1 108 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr1204Q7TR10 309 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Ly96Q9JHF9 160 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Fbp1Q9QXD6 338 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Fhl3Q9R059 289 aa13.15□□□□□ -0.3
Trim39-203ENSMUST00000113706 Trav18A0A075B656 109 aa13.15□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr920E9Q413 310 aa13.15□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ccl11P48298 97 aa13.15□□□□□ -0.31
Trim39-203ENSMUST00000113706 Xaf1Q5NBU8 273 aa13.15□□□□□ -0.31
Trim39-203ENSMUST00000113706 Npy4rQ61041 375 aa13.15□□□□□ -0.31
Trim39-203ENSMUST00000113706 Fam212bQ80VY2 300 aa13.15□□□□□ -0.31
Trim39-203ENSMUST00000113706 Fhl4Q8CDC8 279 aa13.15□□□□□ -0.31
Trim39-203ENSMUST00000113706 Tmem126bQ9D1R1 230 aa13.15□□□□□ -0.31
Trim39-203ENSMUST00000113706 Tsc22d4Q9EQN3 387 aa13.15□□□□□ -0.31
Trim39-203ENSMUST00000113706 Hist1h2baP70696 127 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm9Q3UKW5 162 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm14851Q5ERJ0 116 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 SspnQ62147 216 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 MaoaQ64133 526 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 TprkbQ8QZZ7 175 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Slc17a9Q8VCL5 447 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 NbeaQ9EPN1 2936 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm20877J3QPZ4 227 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ppt1O88531 306 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Tnfsf8P32972 239 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Igfbp1P47876 272 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ssxb2Q8C5Z3 165 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Mpped1Q91ZG2 326 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ing5Q9D8Y8 240 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ttc32Q9DAC7 148 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 St6galnac3Q9WUV2 305 aa13.14□□□□□ -0.31
Trim39-203ENSMUST00000113706 Rpl23a-ps3A0A140T8M7 156 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm17333C6EQI3 125 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm15130F6PYN5 206 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Rpl23aP62751 156 aaKnown RBP13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Tff1Q08423 87 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Zfp429Q7M6Y0 485 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr1408Q8VG32 310 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Q9CQT9 129 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Armc10Q9D0L7 306 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr710Q9EP55 310 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 TaglnP37804 201 aaKnown RBP13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gimap1P70224 277 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Nkx3-1P97436 237 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Tpsab1Q02844 273 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr275Q7TS18 319 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr480Q8VEZ0 312 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr508Q8VG42 310 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 StrapQ9Z1Z2 350 aaKnown RBP13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ubr5Q80TP3 2792 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm15217A2CG07 155 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 G530012D18RikJ3QK25 139 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm21972J3QN38 98 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm3486L7N2D0 199 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 NotoQ5TIS6 240 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Coq2Q66JT7 374 aa13.13□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gng12Q9DAS9 72 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms