RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Sh2d2aQ9QXK9 374 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Slc25a10Q9QZD8 287 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rspo1Q9Z132 265 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Pcnx2Q5DU28 2122 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1274-psA0A1L1SQ02 309 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Zfp456B2RUK9 458 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ube2nP61089 152 aaKnown RBP9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Vstm2lQ6PDS0 220 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Phf13Q8K2W6 296 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr262Q8VFV8 312 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Evx1P23683 416 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 MyocosQ3UWS6 143 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 AI987944Q7TPX5 406 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Aph1aQ8BVF7 265 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr338Q8VGK6 306 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Susd2Q9DBX3 820 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Zfp109A0A0U1RPC5 652 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Pwwp2bE9Q9M8 600 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm17654F7AXR3 209 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Fgf2P15655 154 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gng3P63216 75 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Otx1P80205 355 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Abhd17bQ7M759 288 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Pld4Q8BG07 503 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1009Q8VFK1 314 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 GmppaQ922H4 420 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Fam241aQ9CZL2 131 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 MNCb-2875Q9DCB3 74 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm12728V9GX31 77 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ctxnd1A0A1B0GST9 59 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Tnfrsf1aP25118 454 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Sumo1P63166 101 aaKnown RBP9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Xaf1Q5NBU8 273 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Il12rb1Q60837 738 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Znf474Q6V5K9 347 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1474Q7TQQ8 314 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 NracQ8BNX7 165 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Klf7Q99JB0 301 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 AmtnQ9D3J8 213 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Tmem54Q9D7S1 219 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Dusp3Q9D7X3 185 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Pmaip1Q9JM54 103 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1264Q9R0K2 308 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Nav2E9Q842 2432 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1293-psA0A1L1SVB5 326 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm21746J3QMM6 180 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ankrd33bQ3U0L2 486 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 NmsQ5H8A1 153 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ankrd33Q8BXP5 385 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Tmem70Q921N7 253 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Eid2bE9Q2Y0 151 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ifna4P07351 186 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 GferP56213 198 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Txn2P97493 166 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Fam160a2Q3U2I3 975 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Smim9Q3V0X1 137 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Vps25Q9CQ80 176 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 FetubQ9QXC1 388 aa9.66□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr896-ps1A0A1L1SRZ8 308 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 A0A286YD13 301 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Pglyrp3A1A547 347 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Zdhhc25Q810M4 279 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rab30Q923S9 203 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Sfxn4Q925N1 313 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Dazap2Q9DCP9 168 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Tcf23Q9JLR5 209 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Zfp648D3Z0W3 525 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm6904E9PVF1 202 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm9972E9Q053 102 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 SncaO55042 140 aaKnown RBP9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 PkibQ04758 92 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Cnep1r1Q3UJ81 125 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Lrrc52Q5M8M9 314 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Poc1bQ8BHD1 476 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 AdtrpQ8C138 230 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Egln1Q91YE3 400 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Scp2d1Q9DAH1 156 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Brca2P97929 3329 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm21778A0A087WNP8 232 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm39566A0A1B0GT45 1251 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr906K7N5P3 311 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Iglc2P01844 104 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 P18528 98 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Fgf12P61329 243 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rtp3Q5QGU6 474 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Tnfsf15Q5UBV8 252 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Coq2Q66JT7 374 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Hide1Q75VT8 222 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Utp23Q9CX11 249 aaKnown RBP9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Q9DAA3 117 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Myoz1Q9JK37 296 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Sumo3Q9Z172 110 aa9.65□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Arhgap21Q6DFV3 1944 aa9.65□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Nat8f7E0CYR6 227 aa9.65□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Nudt10P0C027 164 aa9.65□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Nudt11P0C028 164 aa9.65□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Dynlt3P56387 116 aa9.65□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Nutf2P61971 127 aa9.65□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Siah2Q06986 325 aa9.65□□□□□ -0.87
Topbp1-201ENSMUST00000035164 Taar3Q5QD16 343 aa9.65□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms