RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Hspb7P35385 169 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Rps4xP62702 263 aaKnown RBP7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 PilraQ2YFS3 302 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Ifi27Q8C6G0 260 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Olfr816Q8VFU2 312 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Pf4Q9Z126 105 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Cep290Q6A078 2472 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm3045A0A1D5RMA1 209 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Dcaf10A2AKB9 566 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm21732J3QM79 361 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm21921J3QNB5 361 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 RaxO35602 342 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Ca11O70354 328 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 P18529 117 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Olfr275Q7TS18 319 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Ubald2Q8BQH4 164 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Rtn4rl1Q8K0S5 445 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Nabp2Q8R2Y9 212 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Masp2Q91WP0 685 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Cacna1sQ02789 1880 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Trav6n-7A0A075B6A6 116 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Trav13d-3J3QMG8 112 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm5225J3QPL3 108 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Hoxb3P09026 433 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 SelenopP70274 380 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Mpzl1Q3TEW6 270 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Fam222bQ6P539 562 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Cd200r4Q6XJV4 270 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 BmfQ91ZE9 185 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Lims1Q99JW4 325 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Dnase2bQ9QY48 354 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 H3BKT1 185 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm10097J3KMK7 105 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Prss12O08762 761 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Fam219bQ14DQ1 197 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Vdac1Q60932 296 aaKnown RBP7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Utf1Q6J1H4 339 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Fam214bQ8BR27 538 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Cela1Q91X79 266 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Arrdc2Q9D668 407 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm28845A0A087WR76 214 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Cypt3B1AY64 174 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm21310J3QQ23 232 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Ascl2O35885 263 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Ly6fP35460 134 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Smim9Q3V0X1 137 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Slc17a2Q5SZA1 478 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Rcc1Q8VE37 421 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Ethe1Q9DCM0 254 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 TracA0A075B662 137 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Igkv12-44A0A140T8M2 115 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Tex38A2A8T7 201 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Slc25a17O70579 307 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 P01654 111 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 P01656 111 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 P03977 111 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Khdc1bP0C7A0 126 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Trappc1Q5NCF2 145 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 RflnbQ5SVD0 216 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Klk1b21Q61759 261 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Olfr354Q8VGJ8 317 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Rpp25Q91WE3 199 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Leprotl1Q9CQ74 131 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 C1ql3Q9ESN4 255 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Ccr6O54689 367 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Rpl27aP14115 148 aaKnown RBP7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Acsm5Q8BGA8 578 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Olfr877Q8VF62 311 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Olfr1441Q8VFV3 318 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Fmc1Q9CR13 113 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 9330161L09RikQ9D253 136 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 1700034E13RikQ9D2T6 108 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Eaf1Q9D4C5 268 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Egr4Q9WUF2 478 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm20773A0A0A6YXW2 232 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm20807A0A0A6YXX7 232 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Pusl1A2ADA5 291 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm20873J3QMQ9 232 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm20795J3QP49 232 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Cxcl10P17515 98 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 CortP56469 109 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Mdga2P60755 949 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Q3TEI4 1023 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 CiartQ3TQ03 375 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm21440Q3TTD8 232 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Ptrh2Q8R2Y8 181 aaKnown RBP7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Insig2Q91WG1 225 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 HpxQ91X72 460 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 MrgprgQ91ZB5 289 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gatad1Q920S3 266 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Derl1Q99J56 251 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Tmed6Q9CQG0 239 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Cnn3Q9DAW9 330 aaKnown RBP7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 SelenofQ9ERR7 162 aa7.94□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Olfr175-ps1A0A140T8K4 308 aa7.93□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm10799F7C7U2 104 aa7.93□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm6594J3QM43 95 aa7.93□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Ccl4P14097 92 aa7.93□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Pnliprp2P17892 482 aa7.93□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Vsig8Q6P3A4 417 aa7.93□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms