RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 C10orf113Q5VZT2 155 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 NECAP1Q8NC96 275 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 OR1B1Q8NGR6 318 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 VN1R17PQ8TDU5 208 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 CCDC140Q96MF4 163 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 CHRDL1Q9BU40 450 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 SLC25A2Q9BXI2 301 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 F8W036 122 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 AP4M1O00189 453 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 CXorf1O96002 111 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 APOC3P02656 99 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 GCHFRP30047 84 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 FCGR2BP31994 310 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-232ENST00000641947 ADMP35318 185 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 GUCA2BQ16661 112 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 PFDN5Q99471 154 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 C19orf24Q9BVV8 132 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 TOMM40O96008 361 aa13.67□□□□□ -0.22
PHGDH-232ENST00000641947 CTSGP08311 255 aa13.67□□□□□ -0.22
PHGDH-232ENST00000641947 SRP14P37108 136 aaKnown RBP13.67□□□□□ -0.22
PHGDH-232ENST00000641947 CD81P60033 236 aa13.67□□□□□ -0.22
PHGDH-232ENST00000641947 OR1L4Q8NGR5 311 aa13.67□□□□□ -0.22
PHGDH-232ENST00000641947 SEC11CQ9BY50 192 aa13.67□□□□□ -0.22
PHGDH-232ENST00000641947 MRPL32Q9BYC8 188 aaKnown RBP13.67□□□□□ -0.22
PHGDH-232ENST00000641947 SLC35B3Q9H1N7 401 aa13.67□□□□□ -0.22
PHGDH-232ENST00000641947 ZNF702PQ9H963 129 aa13.67□□□□□ -0.22
PHGDH-232ENST00000641947 CARHSP1Q9Y2V2 147 aaKnown RBP13.67□□□□□ -0.22
PHGDH-232ENST00000641947 PAGE4O60829 102 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 SCO1O75880 301 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 HSPB1P04792 205 aaKnown RBP13.66□□□□□ -0.22
PHGDH-232ENST00000641947 RD3LP0DJH9 198 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 PSMB3P49720 205 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 UBE2G2P60604 165 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 LYZP61626 148 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 ATRAIDQ6UW56 229 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 LCNL1Q6ZST4 164 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 LINC00305Q7Z4B0 112 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 ZNF491Q8N8L2 437 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 CYB561D1Q8N8Q1 229 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 KLK15Q9H2R5 256 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 TECRQ9NZ01 308 aaKnown RBP13.66□□□□□ -0.22
PHGDH-232ENST00000641947 VAX2Q9UIW0 290 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 IGLV1-40P01703 118 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 C8orf88P0DMB2 117 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 GPR183P32249 361 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 TEX29Q8N6K0 151 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 OR51G1Q8NGK1 321 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 SMDT1Q9H4I9 107 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 MANBALQ9NQG1 85 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 ZNF580Q9UK33 172 aa13.66□□□□□ -0.22
PHGDH-232ENST00000641947 FLNBO75369 2602 aaKnown RBP13.65□□□□□ -0.22
PHGDH-232ENST00000641947 HIVEP1P15822 2718 aa13.65□□□□□ -0.22
PHGDH-232ENST00000641947 TRAV30A0A087WSZ9 112 aa13.65□□□□□ -0.22
PHGDH-232ENST00000641947 ELOA3CA0A087WX78 387 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-232ENST00000641947 HYPMO75409 117 aa13.65□□□□□ -0.22
PHGDH-232ENST00000641947 IFNA1P01562 189 aa13.65□□□□□ -0.22
PHGDH-232ENST00000641947 TRGV3P03979 118 aa13.65□□□□□ -0.22
PHGDH-232ENST00000641947 YPEL3P61236 119 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-232ENST00000641947 MEF2BQ02080 365 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-232ENST00000641947 C10orf99Q6UWK7 81 aa13.65□□□□□ -0.22
PHGDH-232ENST00000641947 OR5AU1Q8NGC0 362 aa13.65□□□□□ -0.22
PHGDH-232ENST00000641947 TXN2Q99757 166 aa13.65□□□□□ -0.22
PHGDH-232ENST00000641947 YTHDF2Q9Y5A9 579 aaKnown RBP13.65□□□□□ -0.22
PHGDH-232ENST00000641947 WI2-2373I1.2A0A1W2PRP0 233 aa13.64□□□□□ -0.23
PHGDH-232ENST00000641947 OR7C2O60412 319 aa13.64□□□□□ -0.23
PHGDH-232ENST00000641947 OR10J4P0C629 311 aa13.64□□□□□ -0.23
PHGDH-232ENST00000641947 PYYP10082 97 aa13.64□□□□□ -0.23
PHGDH-232ENST00000641947 ATP5G3P48201 142 aa13.64□□□□□ -0.23
PHGDH-232ENST00000641947 KIAA0141Q14154 515 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-232ENST00000641947 LEMD1Q68G75 181 aa13.64□□□□□ -0.23
PHGDH-232ENST00000641947 RBMS3Q6XE24 437 aaKnown RBP13.64□□□□□ -0.23
PHGDH-232ENST00000641947 RNF2Q99496 336 aa13.64□□□□□ -0.23
PHGDH-232ENST00000641947 ESM1Q9NQ30 184 aa13.64□□□□□ -0.23
PHGDH-232ENST00000641947 MRPL27Q9P0M9 148 aaKnown RBP13.64□□□□□ -0.23
PHGDH-232ENST00000641947 FAM223BA6NKX1 122 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 BRI3O95415 125 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 IL4P05112 153 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 CLEC3BP05452 202 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 TPPP2P59282 170 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 USF2Q15853 346 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-232ENST00000641947 CLEC19AQ6UXS0 136 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 ZNF329Q86UD4 541 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 FAM223AQ8IWN6 122 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 RNF125Q96EQ8 232 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 IGHV3-35A0A0C4DH35 117 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 DNAJC9-AS1A6NH13 148 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 OR2C1O95371 312 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 CEBPGP53567 150 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 ATP5G2Q06055 141 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 FAM90A2PQ658T7 463 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 PQLC2Q6ZP29 291 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 SUN5Q8TC36 379 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 EEF1AKMT3Q96AZ1 226 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 HIGD1AQ9Y241 93 aa13.63□□□□□ -0.23
PHGDH-232ENST00000641947 H3BUA1 57 aa13.62□□□□□ -0.23
PHGDH-232ENST00000641947 LY6G6DO95868 133 aa13.62□□□□□ -0.23
PHGDH-232ENST00000641947 TAS2R45P59539 299 aa13.62□□□□□ -0.23
PHGDH-232ENST00000641947 CCDC28AQ8IWP9 274 aa13.62□□□□□ -0.23
PHGDH-232ENST00000641947 SLC25A39Q9BZJ4 359 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-232ENST00000641947 FAM74A7A6NL05 159 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms