RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 C9orf152Q5JTZ5 239 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 MIC13Q5XKP0 118 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 ETFRF1Q6IPR1 90 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 C19orf35Q6ZS72 473 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 TMEM144Q7Z5S9 345 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 LINC01551Q86U37 167 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 HIST3H2BBQ8N257 126 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 Q8N9W7 124 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 OR2T6Q8NHC8 308 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 MRPL32Q9BYC8 188 aaKnown RBP7.02□□□□□ -1.29
PHGDH-219ENST00000641513 MEGF9Q9H1U4 602 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 TMEM167BQ9NRX6 74 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 MOB4Q9Y3A3 225 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 DMRT1Q9Y5R6 373 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 PRRC2AP48634 2157 aaKnown RBP7.02□□□□□ -1.29
PHGDH-219ENST00000641513 MDFIC2A0A1B0GVS7 189 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 SH2D7A6NKC9 451 aaPredicted RBP7.01□□□□□ -1.29
PHGDH-219ENST00000641513 IFITM10A6NMD0 228 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 PPP5D1E7EU14 171 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 CORTO00230 105 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 FABP1P07148 127 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 TRGC1P0CF51 173 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 GCHFRP30047 84 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 OR10J1P30954 320 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 ACTL10Q5JWF8 245 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 ZNF562Q6V9R5 426 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 PQLC2Q6ZP29 291 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 KRTAP1-3Q8IUG1 177 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 TMEM183AQ8IXX5 376 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 ZNF114Q8NC26 417 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 WFDC11Q8NEX6 87 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 OR1P1Q8NH06 330 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 RPUSD4Q96CM3 377 aaKnown RBP7.01□□□□□ -1.29
PHGDH-219ENST00000641513 UHRF2Q96PU4 802 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 SRSF8Q9BRL6 282 aaKnown RBP7.01□□□□□ -1.29
PHGDH-219ENST00000641513 WNT10AQ9GZT5 417 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 GSN-AS1Q9NRJ2 163 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 SLC45A2Q9UMX9 530 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 F11RQ9Y624 299 aaKnown RBP7.01□□□□□ -1.29
PHGDH-219ENST00000641513 URGCP-MRPS24S4R325 110 aa7.01□□□□□ -1.29
PHGDH-219ENST00000641513 HMGB3O15347 200 aaKnown RBP7□□□□□ -1.29
PHGDH-219ENST00000641513 HLA-DRB1P01911 266 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 OR5G3P0C626 314 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 ARL14EPLP0DKL9 152 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 MFAP2P55001 183 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 NDUFA6P56556 154 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 TAS2R45P59539 299 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 ECSCRQ19T08 205 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 UNQ5815/PRO19632Q6UWF5 114 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 BCL6BQ8N143 479 aaPredicted RBP7□□□□□ -1.29
PHGDH-219ENST00000641513 STPG3Q8N7X2 389 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 OR5T1Q8NG75 326 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 OR4X1Q8NH49 305 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 NPIPB3Q92617 1050 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 FRZBQ92765 325 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 RBM14Q96PK6 669 aaKnown RBP7□□□□□ -1.29
PHGDH-219ENST00000641513 FNDC4Q9H6D8 234 aaPredicted RBP7□□□□□ -1.29
PHGDH-219ENST00000641513 NIT2Q9NQR4 276 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 TNFRSF19Q9NS68 423 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 FUT9Q9Y231 359 aa7□□□□□ -1.29
PHGDH-219ENST00000641513 IGHV7-81A0A0B4J1V7 117 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 PCP4L1A6NKN8 68 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 OR10J4P0C629 311 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 LINC00869P0C866 280 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 NPPCP23582 126 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 BPIFB3P59826 476 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 NDPQ00604 133 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 DEFB112Q30KQ8 113 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 COX19Q49B96 90 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 GCSAMLQ5JQS6 135 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 PVRIGQ6DKI7 326 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 CIARTQ8N365 385 aaPredicted RBP6.99□□□□□ -1.29
PHGDH-219ENST00000641513 C5orf56Q8N8D9 126 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 OR1L6Q8NGR2 347 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 OR5R1Q8NH85 324 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 GATAD1Q8WUU5 269 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 HSPB9Q9BQS6 159 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 TMUB1Q9BVT8 246 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 ZNF355PQ9NSJ1 428 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 TECRQ9NZ01 308 aaKnown RBP6.99□□□□□ -1.29
PHGDH-219ENST00000641513 ABCA1O95477 2261 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 POLQO75417 2590 aa6.99□□□□□ -1.29
PHGDH-219ENST00000641513 TRBV9A0A0B4J1U6 114 aa6.98□□□□□ -1.29
PHGDH-219ENST00000641513 A0A1W2PRE2 83 aa6.98□□□□□ -1.29
PHGDH-219ENST00000641513 A6NDX4 124 aa6.98□□□□□ -1.29
PHGDH-219ENST00000641513 NPIPB5A8MRT5 1133 aa6.98□□□□□ -1.29
PHGDH-219ENST00000641513 ATP6V0E1O15342 81 aa6.98□□□□□ -1.29
PHGDH-219ENST00000641513 HIST1H1BP16401 226 aaKnown RBP6.98□□□□□ -1.29
PHGDH-219ENST00000641513 GATA2P23769 480 aaPredicted RBP6.98□□□□□ -1.29
PHGDH-219ENST00000641513 YPEL3P61236 119 aaPredicted RBP6.98□□□□□ -1.29
PHGDH-219ENST00000641513 SELENOTP62341 195 aa6.98□□□□□ -1.29
PHGDH-219ENST00000641513 RPL19P84098 196 aaKnown RBP6.98□□□□□ -1.29
PHGDH-219ENST00000641513 PIFOQ8TCI5 191 aa6.98□□□□□ -1.29
PHGDH-219ENST00000641513 SFRP2Q96HF1 295 aa6.98□□□□□ -1.29
PHGDH-219ENST00000641513 FOXC2Q99958 501 aa6.98□□□□□ -1.29
PHGDH-219ENST00000641513 MRPL36Q9P0J6 103 aaKnown RBP6.98□□□□□ -1.29
PHGDH-219ENST00000641513 ABCA12Q86UK0 2595 aa6.97□□□□□ -1.29
PHGDH-219ENST00000641513 CENPEQ02224 2701 aa6.97□□□□□ -1.29
PHGDH-219ENST00000641513 IGKV1OR2-108A0A075B7D4 117 aa6.97□□□□□ -1.29
PHGDH-219ENST00000641513 TCRBV4S1A1TA0A5B7 111 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms