RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 PFDN2Q9UHV9 154 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 U3KQE9 123 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 RYR3Q15413 4870 aa10.18□□□□□ -0.78
PNKP-228ENST00000637325 K7EQG2 157 aa10.18□□□□□ -0.78
PNKP-228ENST00000637325 OR4E1P0C645 316 aa10.18□□□□□ -0.78
PNKP-228ENST00000637325 DHRS2Q13268 280 aa10.18□□□□□ -0.78
PNKP-228ENST00000637325 USF2Q15853 346 aaPredicted RBP10.18□□□□□ -0.78
PNKP-228ENST00000637325 CNPY1Q3B7I2 92 aa10.18□□□□□ -0.78
PNKP-228ENST00000637325 C16orf54Q6UWD8 224 aa10.18□□□□□ -0.78
PNKP-228ENST00000637325 LYG2Q86SG7 212 aa10.18□□□□□ -0.78
PNKP-228ENST00000637325 STHQ8IWL8 128 aa10.18□□□□□ -0.78
PNKP-228ENST00000637325 FAM24BQ8N5W8 94 aa10.18□□□□□ -0.78
PNKP-228ENST00000637325 PBDC1Q9BVG4 233 aa10.18□□□□□ -0.78
PNKP-228ENST00000637325 A0A0J9YWU9 116 aa10.17□□□□□ -0.78
PNKP-228ENST00000637325 ADAP1O75689 374 aa10.17□□□□□ -0.78
PNKP-228ENST00000637325 ZNF688P0C7X2 276 aa10.17□□□□□ -0.78
PNKP-228ENST00000637325 ANXA7P20073 488 aaKnown RBP10.17□□□□□ -0.78
PNKP-228ENST00000637325 NUP62P37198 522 aaPredicted RBP10.17□□□□□ -0.78
PNKP-228ENST00000637325 SPANXN5Q5MJ07 72 aa10.17□□□□□ -0.78
PNKP-228ENST00000637325 RNF125Q96EQ8 232 aa10.17□□□□□ -0.78
PNKP-228ENST00000637325 SACSQ9NZJ4 4579 aa10.16□□□□□ -0.78
PNKP-228ENST00000637325 BTCP35070 178 aa10.16□□□□□ -0.78
PNKP-228ENST00000637325 ZNF90Q03938 601 aa10.16□□□□□ -0.78
PNKP-228ENST00000637325 OR2F1Q13607 317 aa10.16□□□□□ -0.78
PNKP-228ENST00000637325 SIGLEC15Q6ZMC9 328 aa10.16□□□□□ -0.78
PNKP-228ENST00000637325 GLMPQ8WWB7 406 aa10.16□□□□□ -0.78
PNKP-228ENST00000637325 PPP1R14BQ96C90 147 aa10.16□□□□□ -0.78
PNKP-228ENST00000637325 STRAPQ9Y3F4 350 aaKnown RBP10.16□□□□□ -0.78
PNKP-228ENST00000637325 LYSTQ99698 3801 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 IGKV1D-37A0A075B6S9 117 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 SNRPGP15A8MWD9 76 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 H3BP45 60 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 LYRM1O43325 122 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 BUB3O43684 328 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 CA1P00915 261 aaPredicted RBP10.15□□□□□ -0.78
PNKP-228ENST00000637325 NKX2-1P43699 371 aaPredicted RBP10.15□□□□□ -0.78
PNKP-228ENST00000637325 LYZP61626 148 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 OR8G2PQ6IF36 304 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 TMEM217Q8N7C4 229 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 DCANP1Q8TF63 244 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 GATAD1Q8WUU5 269 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 TRGV9Q99603 122 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 PSENENQ9NZ42 101 aa10.15□□□□□ -0.78
PNKP-228ENST00000637325 LCE6AA0A183 80 aa10.14□□□□□ -0.79
PNKP-228ENST00000637325 CXorf65A6NEN9 183 aa10.14□□□□□ -0.79
PNKP-228ENST00000637325 SCGB1D2O95969 90 aa10.14□□□□□ -0.79
PNKP-228ENST00000637325 SNRPD3P62318 126 aaKnown RBP10.14□□□□□ -0.79
PNKP-228ENST00000637325 POLR2GP62487 172 aaKnown RBP eCLIP10.14□□□□□ -0.79
PNKP-228ENST00000637325 ID3Q02535 119 aa10.14□□□□□ -0.79
PNKP-228ENST00000637325 AKR1C1Q04828 323 aa10.14□□□□□ -0.79
PNKP-228ENST00000637325 PSMG4Q5JS54 123 aa10.14□□□□□ -0.79
PNKP-228ENST00000637325 ACTL10Q5JWF8 245 aa10.14□□□□□ -0.79
PNKP-228ENST00000637325 RARRES2Q99969 163 aa10.14□□□□□ -0.79
PNKP-228ENST00000637325 C20orf85Q9H1P6 137 aa10.14□□□□□ -0.79
PNKP-228ENST00000637325 NRN1Q9NPD7 142 aa10.14□□□□□ -0.79
PNKP-228ENST00000637325 KNCNA6PVL3 124 aa10.13□□□□□ -0.79
PNKP-228ENST00000637325 PLA2G10O15496 165 aa10.13□□□□□ -0.79
PNKP-228ENST00000637325 SSSCA1O60232 199 aa10.13□□□□□ -0.79
PNKP-228ENST00000637325 JTBO76095 146 aa10.13□□□□□ -0.79
PNKP-228ENST00000637325 CFDP00746 253 aaPredicted RBP10.13□□□□□ -0.79
PNKP-228ENST00000637325 PMS2P11Q13670 270 aa10.13□□□□□ -0.79
PNKP-228ENST00000637325 IAH1Q2TAA2 248 aaPredicted RBP10.13□□□□□ -0.79
PNKP-228ENST00000637325 THAP8Q8NA92 274 aa10.13□□□□□ -0.79
PNKP-228ENST00000637325 OR4D5Q8NGN0 318 aa10.13□□□□□ -0.79
PNKP-228ENST00000637325 OR11H2Q8NH07 326 aa10.13□□□□□ -0.79
PNKP-228ENST00000637325 GSKIPQ9P0R6 139 aa10.13□□□□□ -0.79
PNKP-228ENST00000637325 FBXL17Q9UF56 701 aa10.13□□□□□ -0.79
PNKP-228ENST00000637325 SMCO3A2RU48 225 aa10.12□□□□□ -0.79
PNKP-228ENST00000637325 TCRBP04435 133 aa10.12□□□□□ -0.79
PNKP-228ENST00000637325 MORN3Q6PF18 240 aaPredicted RBP10.12□□□□□ -0.79
PNKP-228ENST00000637325 MITD1Q8WV92 249 aa10.12□□□□□ -0.79
PNKP-228ENST00000637325 SMIM8Q96KF7 97 aa10.12□□□□□ -0.79
PNKP-228ENST00000637325 CCDC32Q9BV29 185 aa10.12□□□□□ -0.79
PNKP-228ENST00000637325 SEPSECSQ9HD40 501 aaKnown RBP10.12□□□□□ -0.79
PNKP-228ENST00000637325 TRAV6A0A075B6T7 132 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 IGKV1OR2-108A0A075B7D4 117 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 PRSS46E5RG02 174 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 SPP1P10451 314 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 S100A7P31151 101 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 ID1P41134 155 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 ZNF846Q147U1 533 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 TMEM41BQ5BJD5 291 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 C1orf194Q5T5A4 169 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 ACOT7LQ6ZUV0 252 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 TRPT1Q86TN4 253 aaKnown RBP10.11□□□□□ -0.79
PNKP-228ENST00000637325 OR8I2Q8N0Y5 310 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 ZBTB8BQ8NAP8 495 aaPredicted RBP10.11□□□□□ -0.79
PNKP-228ENST00000637325 BPIFCQ8NFQ6 507 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 S100ZQ8WXG8 99 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 RAB40CQ96S21 281 aa10.11□□□□□ -0.79
PNKP-228ENST00000637325 RYR2Q92736 4967 aa10.1□□□□□ -0.79
PNKP-228ENST00000637325 FAM25EA8MYX2 175 aa10.1□□□□□ -0.79
PNKP-228ENST00000637325 ATF4P18848 351 aaPredicted RBP10.1□□□□□ -0.79
PNKP-228ENST00000637325 EWSR1Q01844 656 aaKnown RBP eCLIP10.1□□□□□ -0.79
PNKP-228ENST00000637325 TMEM144Q7Z5S9 345 aa10.1□□□□□ -0.79
PNKP-228ENST00000637325 LINC00052Q96N35 136 aa10.1□□□□□ -0.79
PNKP-228ENST00000637325 FAM240BA0A1B0GVZ2 78 aa10.09□□□□□ -0.79
PNKP-228ENST00000637325 NUPR2A6NF83 97 aa10.09□□□□□ -0.79
PNKP-228ENST00000637325 H2AFB2P0C5Z0 115 aa10.09□□□□□ -0.79
PNKP-228ENST00000637325 METTL15P1P0C7V9 234 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms