RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 LRRC75A-AS1Q8N1F1 130 aa12.45□□□□□ -0.42
CACNA1A-231ENST00000636816 RNF2Q99496 336 aa12.45□□□□□ -0.42
CACNA1A-231ENST00000636816 SCO2A0A1W2PP80 73 aa12.44□□□□□ -0.42
CACNA1A-231ENST00000636816 COLCA2A8K830 154 aa12.44□□□□□ -0.42
CACNA1A-231ENST00000636816 PDE6DO43924 150 aa12.44□□□□□ -0.42
CACNA1A-231ENST00000636816 IGHV4-31P0DP07 118 aa12.44□□□□□ -0.42
CACNA1A-231ENST00000636816 TMEM241Q24JQ0 296 aa12.44□□□□□ -0.42
CACNA1A-231ENST00000636816 Q96MF0 132 aa12.44□□□□□ -0.42
CACNA1A-231ENST00000636816 TMEM167BQ9NRX6 74 aa12.44□□□□□ -0.42
CACNA1A-231ENST00000636816 MOB4Q9Y3A3 225 aa12.44□□□□□ -0.42
CACNA1A-231ENST00000636816 HELZ2Q9BYK8 2649 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-231ENST00000636816 PRRC2AP48634 2157 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-231ENST00000636816 ELOA3CA0A087WX78 387 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-231ENST00000636816 HYPMO75409 117 aa12.43□□□□□ -0.42
CACNA1A-231ENST00000636816 LYZP61626 148 aa12.43□□□□□ -0.42
CACNA1A-231ENST00000636816 LEMD1Q68G75 181 aa12.43□□□□□ -0.42
CACNA1A-231ENST00000636816 NAT8Q9UHE5 227 aa12.43□□□□□ -0.42
CACNA1A-231ENST00000636816 LINC00527Q9UJ94 153 aa12.43□□□□□ -0.42
CACNA1A-231ENST00000636816 FBXL7Q9UJT9 491 aa12.43□□□□□ -0.42
CACNA1A-231ENST00000636816 NDUFS6O75380 124 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-231ENST00000636816 RD3LP0DJH9 198 aa12.43□□□□□ -0.42
CACNA1A-231ENST00000636816 FAM110DQ8TAY7 271 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-231ENST00000636816 A6NDX4 124 aa12.42□□□□□ -0.42
CACNA1A-231ENST00000636816 F6UZH7 168 aa12.42□□□□□ -0.42
CACNA1A-231ENST00000636816 MFAP4P55083 255 aa12.42□□□□□ -0.42
CACNA1A-231ENST00000636816 PLP1P60201 277 aa12.42□□□□□ -0.42
CACNA1A-231ENST00000636816 RPL23P62829 140 aaKnown RBP12.42□□□□□ -0.42
CACNA1A-231ENST00000636816 ADIRFQ15847 76 aa12.42□□□□□ -0.42
CACNA1A-231ENST00000636816 PAXXQ9BUH6 204 aa12.42□□□□□ -0.42
CACNA1A-231ENST00000636816 OR51M1Q9H341 326 aa12.42□□□□□ -0.42
CACNA1A-231ENST00000636816 AURKAIP1Q9NWT8 199 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-231ENST00000636816 PGPEP1LA6NFU8 196 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 GGTLC3B5MD39 225 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 GNG7O60262 68 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 OR2C1O95371 312 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 UBE2L3P68036 154 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 FLI1Q01543 452 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 Q56UQ5 140 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 C9orf152Q5JTZ5 239 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 C16orf82Q7Z2V1 217 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 FXYD5Q96DB9 178 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 C21orf62Q9NYP8 219 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 TSPAN9O75954 239 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 SUMO1P63165 101 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 PNRC1Q12796 327 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 FAM24BQ8N5W8 94 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 TXNDC17Q9BRA2 123 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 TUBA4BQ9H853 241 aa12.41□□□□□ -0.42
CACNA1A-231ENST00000636816 TRBV20OR9-2A0A075B6H5 130 aa12.4□□□□□ -0.42
CACNA1A-231ENST00000636816 OR2T8A6NH00 312 aa12.4□□□□□ -0.42
CACNA1A-231ENST00000636816 DEFB112Q30KQ8 113 aa12.4□□□□□ -0.42
CACNA1A-231ENST00000636816 ZNF343Q6P1L6 599 aa12.4□□□□□ -0.42
CACNA1A-231ENST00000636816 Q6ZS46 218 aa12.4□□□□□ -0.42
CACNA1A-231ENST00000636816 MS4A10Q96PG2 267 aa12.4□□□□□ -0.42
CACNA1A-231ENST00000636816 THYN1Q9P016 225 aa12.4□□□□□ -0.42
CACNA1A-231ENST00000636816 HIGD1AQ9Y241 93 aa12.4□□□□□ -0.42
CACNA1A-231ENST00000636816 A0A087WWC5 75 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 J3QLI3 93 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 TOMM40O96008 361 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 CRYBB3P26998 211 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 BLCAPP62952 87 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 RNF212Q495C1 297 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 ZNF491Q8N8L2 437 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 HIST1H2BAQ96A08 127 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 MBD6Q96DN6 1003 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 MRPL27Q9P0M9 148 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 B4DEV8 164 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 RHOGP84095 191 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 C15orf32Q32M92 178 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 C15orf54Q8N8G6 183 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 YPEL4Q96NS1 127 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 SLC25A39Q9BZJ4 359 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 TEX15Q9BXT5 2789 aa12.39□□□□□ -0.43
CACNA1A-231ENST00000636816 TRBV9A0A0B4J1U6 114 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 H3BTX0 84 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 CTSGP08311 255 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 C19orf54Q5BKX5 351 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 ZNF48Q96MX3 618 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 CHRDL1Q9BU40 450 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 URGCP-MRPS24S4R325 110 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 TRAV30A0A087WSZ9 112 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 TRAV41A0A0B4J266 112 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 A0A1W2PRE2 83 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 WI2-2373I1.2A0A1W2PRP0 233 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 IGHV4-59P01825 116 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 IL4P05112 153 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 YPEL3P61236 119 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 KLK9Q2XQG4 91 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 CIARTQ8N365 385 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 BLNKQ8WV28 456 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 C11orf52Q96A22 123 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 ELOVL1Q9BW60 279 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 KLK9Q9UKQ9 250 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 ARL2-SNX15V9GYD0 113 aa12.38□□□□□ -0.43
CACNA1A-231ENST00000636816 CRYBA1P05813 215 aa12.37□□□□□ -0.43
CACNA1A-231ENST00000636816 GP9P14770 177 aa12.37□□□□□ -0.43
CACNA1A-231ENST00000636816 HIST1H1BP16401 226 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-231ENST00000636816 HNF1AP20823 631 aa12.37□□□□□ -0.43
CACNA1A-231ENST00000636816 ADMP35318 185 aa12.37□□□□□ -0.43
CACNA1A-231ENST00000636816 USF2Q15853 346 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms