RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 COQ8AQ8NI60 647 aa13.54□□□□□ -0.24
CLN6-214ENST00000636314 FLVCR2Q9UPI3 526 aa13.54□□□□□ -0.24
CLN6-214ENST00000636314 U3KQE9 123 aa13.54□□□□□ -0.24
CLN6-214ENST00000636314 MPTX1A8MV57 137 aa13.53□□□□□ -0.24
CLN6-214ENST00000636314 K7EQG2 157 aa13.53□□□□□ -0.24
CLN6-214ENST00000636314 PSG1P11464 419 aa13.53□□□□□ -0.24
CLN6-214ENST00000636314 OR51G1Q8NGK1 321 aa13.53□□□□□ -0.24
CLN6-214ENST00000636314 RNF183Q96D59 192 aa13.53□□□□□ -0.24
CLN6-214ENST00000636314 MAGT1Q9H0U3 335 aa13.53□□□□□ -0.24
CLN6-214ENST00000636314 CSTL1Q9H114 145 aa13.53□□□□□ -0.24
CLN6-214ENST00000636314 WRBO00258 174 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 SYNGR2O43760 224 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 ADAP1O75689 374 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 OR4E1P0C645 316 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 BTCP35070 178 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 RPP30P78346 268 aaKnown RBP13.52□□□□□ -0.25
CLN6-214ENST00000636314 DHRS2Q13268 280 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 GAMTQ14353 236 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 C4orf46Q504U0 113 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 C16orf54Q6UWD8 224 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 LYG2Q86SG7 212 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 GLMPQ8WWB7 406 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 RNF125Q96EQ8 232 aa13.52□□□□□ -0.25
CLN6-214ENST00000636314 A0A0J9YWU9 116 aa13.51□□□□□ -0.25
CLN6-214ENST00000636314 FABP1P07148 127 aa13.51□□□□□ -0.25
CLN6-214ENST00000636314 ZNF688P0C7X2 276 aa13.51□□□□□ -0.25
CLN6-214ENST00000636314 ANXA7P20073 488 aaKnown RBP13.51□□□□□ -0.25
CLN6-214ENST00000636314 NUP62P37198 522 aaPredicted RBP13.51□□□□□ -0.25
CLN6-214ENST00000636314 AP2S1P53680 142 aaPredicted RBP13.51□□□□□ -0.25
CLN6-214ENST00000636314 STHQ8IWL8 128 aa13.51□□□□□ -0.25
CLN6-214ENST00000636314 DCANP1Q8TF63 244 aa13.51□□□□□ -0.25
CLN6-214ENST00000636314 PBDC1Q9BVG4 233 aa13.51□□□□□ -0.25
CLN6-214ENST00000636314 CA1P00915 261 aaPredicted RBP13.5□□□□□ -0.25
CLN6-214ENST00000636314 IFNA21P01568 189 aa13.5□□□□□ -0.25
CLN6-214ENST00000636314 PMS2P11Q13670 270 aa13.5□□□□□ -0.25
CLN6-214ENST00000636314 PFDN2Q9UHV9 154 aa13.5□□□□□ -0.25
CLN6-214ENST00000636314 IGKV1D-37A0A075B6S9 117 aa13.49□□□□□ -0.25
CLN6-214ENST00000636314 CXorf65A6NEN9 183 aa13.49□□□□□ -0.25
CLN6-214ENST00000636314 H3BP45 60 aa13.49□□□□□ -0.25
CLN6-214ENST00000636314 BUB3O43684 328 aa13.49□□□□□ -0.25
CLN6-214ENST00000636314 ZNF90Q03938 601 aa13.49□□□□□ -0.25
CLN6-214ENST00000636314 SPANXN5Q5MJ07 72 aa13.49□□□□□ -0.25
CLN6-214ENST00000636314 OR8G2PQ6IF36 304 aa13.49□□□□□ -0.25
CLN6-214ENST00000636314 SIGLEC15Q6ZMC9 328 aa13.49□□□□□ -0.25
CLN6-214ENST00000636314 GATAD1Q8WUU5 269 aa13.49□□□□□ -0.25
CLN6-214ENST00000636314 LYZP61626 148 aa13.48□□□□□ -0.25
CLN6-214ENST00000636314 CNPY1Q3B7I2 92 aa13.48□□□□□ -0.25
CLN6-214ENST00000636314 TRGV9Q99603 122 aa13.48□□□□□ -0.25
CLN6-214ENST00000636314 C20orf85Q9H1P6 137 aa13.48□□□□□ -0.25
CLN6-214ENST00000636314 STRAPQ9Y3F4 350 aaKnown RBP13.48□□□□□ -0.25
CLN6-214ENST00000636314 LYRM1O43325 122 aa13.47□□□□□ -0.25
CLN6-214ENST00000636314 NKX2-1P43699 371 aaPredicted RBP13.47□□□□□ -0.25
CLN6-214ENST00000636314 POLR2GP62487 172 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLN6-214ENST00000636314 OR2F1Q13607 317 aa13.47□□□□□ -0.25
CLN6-214ENST00000636314 PSMG4Q5JS54 123 aa13.47□□□□□ -0.25
CLN6-214ENST00000636314 TMEM217Q8N7C4 229 aa13.47□□□□□ -0.25
CLN6-214ENST00000636314 NRN1Q9NPD7 142 aa13.47□□□□□ -0.25
CLN6-214ENST00000636314 KMT2AQ03164 3969 aa13.47□□□□□ -0.25
CLN6-214ENST00000636314 KNCNA6PVL3 124 aa13.46□□□□□ -0.25
CLN6-214ENST00000636314 SNRPGP15A8MWD9 76 aa13.46□□□□□ -0.25
CLN6-214ENST00000636314 PRSS46E5RG02 174 aa13.46□□□□□ -0.25
CLN6-214ENST00000636314 PLA2G10O15496 165 aa13.46□□□□□ -0.25
CLN6-214ENST00000636314 SNRPD3P62318 126 aaKnown RBP13.46□□□□□ -0.25
CLN6-214ENST00000636314 ID3Q02535 119 aa13.46□□□□□ -0.25
CLN6-214ENST00000636314 AKR1C1Q04828 323 aa13.46□□□□□ -0.25
CLN6-214ENST00000636314 TRPT1Q86TN4 253 aaKnown RBP13.46□□□□□ -0.25
CLN6-214ENST00000636314 THAP8Q8NA92 274 aa13.46□□□□□ -0.25
CLN6-214ENST00000636314 OR4D5Q8NGN0 318 aa13.46□□□□□ -0.25
CLN6-214ENST00000636314 PPP1R14BQ96C90 147 aa13.46□□□□□ -0.25
CLN6-214ENST00000636314 RARRES2Q99969 163 aa13.46□□□□□ -0.25
CLN6-214ENST00000636314 AGRNO00468 2067 aa13.45□□□□□ -0.26
CLN6-214ENST00000636314 IGKV1OR2-108A0A075B7D4 117 aa13.45□□□□□ -0.26
CLN6-214ENST00000636314 SSSCA1O60232 199 aa13.45□□□□□ -0.26
CLN6-214ENST00000636314 EWSR1Q01844 656 aaKnown RBP eCLIP13.45□□□□□ -0.267e-6■■□□□ 12.2
CLN6-214ENST00000636314 ACTL10Q5JWF8 245 aa13.45□□□□□ -0.26
CLN6-214ENST00000636314 ACOT7LQ6ZUV0 252 aa13.45□□□□□ -0.26
CLN6-214ENST00000636314 CCDC32Q9BV29 185 aa13.45□□□□□ -0.26
CLN6-214ENST00000636314 PSENENQ9NZ42 101 aa13.45□□□□□ -0.26
CLN6-214ENST00000636314 NUPR2A6NF83 97 aa13.44□□□□□ -0.26
CLN6-214ENST00000636314 SCGB1D2O95969 90 aa13.44□□□□□ -0.26
CLN6-214ENST00000636314 SPP1P10451 314 aa13.44□□□□□ -0.26
CLN6-214ENST00000636314 ATF4P18848 351 aaPredicted RBP13.44□□□□□ -0.26
CLN6-214ENST00000636314 IAH1Q2TAA2 248 aaPredicted RBP13.44□□□□□ -0.26
CLN6-214ENST00000636314 OR11H2Q8NH07 326 aa13.44□□□□□ -0.26
CLN6-214ENST00000636314 MITD1Q8WV92 249 aa13.44□□□□□ -0.26
CLN6-214ENST00000636314 FBXL17Q9UF56 701 aa13.44□□□□□ -0.26
CLN6-214ENST00000636314 CFDP00746 253 aaPredicted RBP13.43□□□□□ -0.26
CLN6-214ENST00000636314 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
CLN6-214ENST00000636314 MORN3Q6PF18 240 aaPredicted RBP13.43□□□□□ -0.26
CLN6-214ENST00000636314 SEPSECSQ9HD40 501 aaKnown RBP13.43□□□□□ -0.26
CLN6-214ENST00000636314 SMCO3A2RU48 225 aa13.42□□□□□ -0.26
CLN6-214ENST00000636314 TCRBP04435 133 aa13.42□□□□□ -0.26
CLN6-214ENST00000636314 C1orf194Q5T5A4 169 aa13.42□□□□□ -0.26
CLN6-214ENST00000636314 BPIFCQ8NFQ6 507 aa13.42□□□□□ -0.26
CLN6-214ENST00000636314 RAB40CQ96S21 281 aa13.42□□□□□ -0.26
CLN6-214ENST00000636314 NUDT15Q9NV35 164 aa13.42□□□□□ -0.26
CLN6-214ENST00000636314 GSKIPQ9P0R6 139 aa13.42□□□□□ -0.26
CLN6-214ENST00000636314 DNAH10Q8IVF4 4471 aa13.42□□□□□ -0.26
CLN6-214ENST00000636314 TRAV6A0A075B6T7 132 aa13.41□□□□□ -0.26
CLN6-214ENST00000636314 C4BPBP20851 252 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms