RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 OR51G1Q8NGK1 321 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 DCANP1Q8TF63 244 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 TMEM170AQ8WVE7 144 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 GLMPQ8WWB7 406 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 SOSTQ9BQB4 213 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 PBDC1Q9BVG4 233 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 U3KQE9 123 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 DEFB4AO15263 64 aa13.1□□□□□ -0.31
PNKP-225ENST00000636214 RAB11AP62491 216 aa13.1□□□□□ -0.31
PNKP-225ENST00000636214 USF2Q15853 346 aaPredicted RBP13.1□□□□□ -0.31
PNKP-225ENST00000636214 TMEM128Q5BJH2 165 aa13.1□□□□□ -0.31
PNKP-225ENST00000636214 NRN1Q9NPD7 142 aa13.1□□□□□ -0.31
PNKP-225ENST00000636214 MED6O75586 246 aa13.09□□□□□ -0.31
PNKP-225ENST00000636214 PSG1P11464 419 aa13.09□□□□□ -0.31
PNKP-225ENST00000636214 INPP1P49441 399 aa13.09□□□□□ -0.31
PNKP-225ENST00000636214 NUTF2P61970 127 aaKnown RBP13.09□□□□□ -0.31
PNKP-225ENST00000636214 RPP30P78346 268 aaKnown RBP13.09□□□□□ -0.31
PNKP-225ENST00000636214 DEDD2Q8WXF8 326 aa13.09□□□□□ -0.31
PNKP-225ENST00000636214 RNF125Q96EQ8 232 aa13.09□□□□□ -0.31
PNKP-225ENST00000636214 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
PNKP-225ENST00000636214 GPX4P36969 197 aaPredicted RBP13.08□□□□□ -0.32
PNKP-225ENST00000636214 OR8G2PQ6IF36 304 aa13.08□□□□□ -0.32
PNKP-225ENST00000636214 TRIM63Q969Q1 353 aa13.08□□□□□ -0.32
PNKP-225ENST00000636214 PPP1R14BQ96C90 147 aa13.08□□□□□ -0.32
PNKP-225ENST00000636214 CIB3Q96Q77 187 aaPredicted RBP13.08□□□□□ -0.32
PNKP-225ENST00000636214 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.32
PNKP-225ENST00000636214 FAM90A26D6RGX4 464 aa13.07□□□□□ -0.32
PNKP-225ENST00000636214 BUB3O43684 328 aa13.07□□□□□ -0.32
PNKP-225ENST00000636214 IAPPP10997 89 aa13.07□□□□□ -0.32
PNKP-225ENST00000636214 MIFP14174 115 aa13.07□□□□□ -0.32
PNKP-225ENST00000636214 SPANXN2Q5MJ10 180 aa13.07□□□□□ -0.32
PNKP-225ENST00000636214 C2CD4CQ8TF44 421 aa13.07□□□□□ -0.32
PNKP-225ENST00000636214 RAB40CQ96S21 281 aa13.07□□□□□ -0.32
PNKP-225ENST00000636214 C1QTNF4Q9BXJ3 329 aa13.07□□□□□ -0.32
PNKP-225ENST00000636214 SLC25A6P12236 298 aa13.06□□□□□ -0.32
PNKP-225ENST00000636214 LYZP61626 148 aa13.06□□□□□ -0.32
PNKP-225ENST00000636214 GAMTQ14353 236 aa13.06□□□□□ -0.32
PNKP-225ENST00000636214 TBC1D24Q9ULP9 559 aa13.06□□□□□ -0.32
PNKP-225ENST00000636214 TMED3Q9Y3Q3 217 aa13.06□□□□□ -0.32
PNKP-225ENST00000636214 V9GYH0 126 aa13.06□□□□□ -0.32
PNKP-225ENST00000636214 IGHV4-28A0A0C4DH34 117 aa13.05□□□□□ -0.32
PNKP-225ENST00000636214 C11orf94C9JXX5 98 aa13.05□□□□□ -0.32
PNKP-225ENST00000636214 SFT2D2O95562 160 aa13.05□□□□□ -0.32
PNKP-225ENST00000636214 C4BPBP20851 252 aa13.05□□□□□ -0.32
PNKP-225ENST00000636214 ID1P41134 155 aa13.05□□□□□ -0.32
PNKP-225ENST00000636214 LRTM2Q8N967 370 aa13.05□□□□□ -0.32
PNKP-225ENST00000636214 CLEC5AQ9NY25 188 aa13.05□□□□□ -0.32
PNKP-225ENST00000636214 SNRPGP15A8MWD9 76 aa13.04□□□□□ -0.32
PNKP-225ENST00000636214 LGALS9CQ6DKI2 356 aa13.04□□□□□ -0.32
PNKP-225ENST00000636214 Q8NAQ8 132 aa13.04□□□□□ -0.32
PNKP-225ENST00000636214 PITX3O75364 302 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 HOXB5P09067 269 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 GIG44P09565 113 aaPredicted RBP13.03□□□□□ -0.32
PNKP-225ENST00000636214 S100A7P31151 101 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 TCTAP57738 103 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 ZNF90Q03938 601 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 PPP1R1AQ13522 171 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 OR2F1Q13607 317 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 ZNF79Q15937 498 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 TRIQKQ629K1 86 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 COQ8AQ8NI60 647 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 TRGV9Q99603 122 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 HRH4Q9H3N8 390 aa13.03□□□□□ -0.32
PNKP-225ENST00000636214 ZNF705EA8MWA4 302 aaPredicted RBP13.02□□□□□ -0.33
PNKP-225ENST00000636214 WRBO00258 174 aa13.02□□□□□ -0.33
PNKP-225ENST00000636214 SYNGR2O43760 224 aa13.02□□□□□ -0.33
PNKP-225ENST00000636214 CFDP00746 253 aaPredicted RBP13.02□□□□□ -0.33
PNKP-225ENST00000636214 NKX2-1P43699 371 aaPredicted RBP13.02□□□□□ -0.33
PNKP-225ENST00000636214 UBE2MP61081 183 aaKnown RBP13.02□□□□□ -0.33
PNKP-225ENST00000636214 C1orf194Q5T5A4 169 aa13.02□□□□□ -0.33
PNKP-225ENST00000636214 CCDC190Q86UF4 302 aa13.02□□□□□ -0.33
PNKP-225ENST00000636214 OR8I2Q8N0Y5 310 aa13.02□□□□□ -0.33
PNKP-225ENST00000636214 LINC00052Q96N35 136 aa13.02□□□□□ -0.33
PNKP-225ENST00000636214 NAP1L6A6NFF2 107 aa13.01□□□□□ -0.33
PNKP-225ENST00000636214 IGLL5B9A064 214 aa13.01□□□□□ -0.33
PNKP-225ENST00000636214 HLA-DRB4P13762 266 aa13.01□□□□□ -0.33
PNKP-225ENST00000636214 AKR1C1Q04828 323 aa13.01□□□□□ -0.33
PNKP-225ENST00000636214 SAMD13Q5VXD3 122 aa13.01□□□□□ -0.33
PNKP-225ENST00000636214 GGNBP1Q5YKI7 109 aa13.01□□□□□ -0.33
PNKP-225ENST00000636214 MAGT1Q9H0U3 335 aa13.01□□□□□ -0.33
PNKP-225ENST00000636214 XCL2Q9UBD3 114 aa13.01□□□□□ -0.33
PNKP-225ENST00000636214 HLA-DRB4X5D2U9 266 aa13.01□□□□□ -0.33
PNKP-225ENST00000636214 IGKV1D-37A0A075B6S9 117 aa13□□□□□ -0.33
PNKP-225ENST00000636214 TRAV10A0A0B4J240 114 aa13□□□□□ -0.33
PNKP-225ENST00000636214 H3BMM0 161 aa13□□□□□ -0.33
PNKP-225ENST00000636214 RBMY1A1P0DJD3 496 aaKnown RBP13□□□□□ -0.33
PNKP-225ENST00000636214 RBMY1CP0DJD4 496 aa13□□□□□ -0.33
PNKP-225ENST00000636214 HLA-DMBP28068 263 aa13□□□□□ -0.33
PNKP-225ENST00000636214 PSMB3P49720 205 aa13□□□□□ -0.33
PNKP-225ENST00000636214 RBMY1FQ15415 496 aaKnown RBP13□□□□□ -0.33
PNKP-225ENST00000636214 SPANXN5Q5MJ07 72 aa13□□□□□ -0.33
PNKP-225ENST00000636214 STRAPQ9Y3F4 350 aaKnown RBP13□□□□□ -0.33
PNKP-225ENST00000636214 X6R8D5 127 aa13□□□□□ -0.33
PNKP-225ENST00000636214 CENPXA8MT69 81 aa12.99□□□□□ -0.33
PNKP-225ENST00000636214 ZNF701M0R085 212 aaPredicted RBP12.99□□□□□ -0.33
PNKP-225ENST00000636214 IFNA21P01568 189 aa12.99□□□□□ -0.33
PNKP-225ENST00000636214 GALR1P47211 349 aa12.99□□□□□ -0.33
PNKP-225ENST00000636214 FOXI2Q6ZQN5 318 aa12.99□□□□□ -0.33
PNKP-225ENST00000636214 BPIFCQ8NFQ6 507 aa12.99□□□□□ -0.33
PNKP-225ENST00000636214 SMCO3A2RU48 225 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms