RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 NEDD8Q15843 81 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 TAF12Q16514 161 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 CDNFQ49AH0 187 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 HACD4Q5VWC8 232 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 TNFAIP8L2Q6P589 184 aaPredicted RBP-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 RNASEKQ6P5S7 137 aaKnown RBP-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 VTCN1Q7Z7D3 282 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 BPIFA4PQ86YQ2 179 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 OR8H3Q8N146 312 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 OR8H2Q8N162 312 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 C4orf33Q8N1A6 199 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 EIF1ADQ8N9N8 165 aaKnown RBP-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 TTC29Q8NA56 475 aaPredicted RBP-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 SPC24Q8NBT2 197 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 OR10X1Q8NGY0 326 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 FAM3CQ92520 227 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 NCLNQ969V3 563 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 DYNLL2Q96FJ2 89 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 KCTD7Q96MP8 289 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 JAKMIP1Q96N16 626 aaKnown RBP-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 RILPQ96NA2 401 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 GPX7Q96SL4 187 aaPredicted RBP-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 SEC62Q99442 399 aaKnown RBP-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 FAM213AQ9BRX8 229 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 FTHL17Q9BXU8 183 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 MED28Q9H204 178 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 NT5MQ9NPB1 228 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 EIF2B3Q9NR50 452 aaKnown RBP-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 EURLQ9NYK6 297 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 TVP23BQ9NYZ1 205 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 NDUFA12Q9UI09 145 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 ERGIC3Q9Y282 383 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 PIGLQ9Y2B2 252 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 V9GYV3 84 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 ZMYM4Q5VZL5 1548 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 POLA1P09884 1462 aaPredicted RBP-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 ARAP1Q96P48 1450 aa-1.88□□□□□ -2.71
CDKL5-210ENST00000636046 ABCC4O15439 1325 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 NCOA3Q9Y6Q9 1424 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 ARHGEF11O15085 1522 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 TRBV7-4A0A0J9YYF1 115 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 A0A1B0GXF2 115 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 AZIN1O14977 448 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 TTC4O95801 387 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 SCGB1D2O95969 90 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 HSMCR30P0CW71 290 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 IDO1P14902 403 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 OR10J1P30954 320 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 S100A7P31151 101 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 IFNA8P32881 189 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 CA8P35219 290 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 PHBP35232 272 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 ARL2P36404 184 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 PSMB3P49720 205 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 SETQ01105 290 aaPredicted RBP-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 SPAG1Q07617 926 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 OR2F1Q13607 317 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 CUL4AQ13619 759 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 ZNHIT3Q15649 155 aaPredicted RBP-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 TRMT5Q32P41 509 aaKnown RBP-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 C9orf152Q5JTZ5 239 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 CFAP58Q5T655 872 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 THOC7Q6I9Y2 204 aaKnown RBP-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 RASSF6Q6ZTQ3 369 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 SSX8Q7RTT4 187 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 ARPINQ7Z6K5 226 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 GPHB5Q86YW7 130 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 CCDC89Q8N998 374 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 OR5D18Q8NGL1 313 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 OR5AR1Q8NGP9 310 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 OR4K15Q8NH41 348 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 SLC37A2Q8TED4 501 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 TMEM234Q8WY98 164 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 RPEQ96AT9 228 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 RCN3Q96D15 328 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 ARL5BQ96KC2 179 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 OR4C12Q96R67 309 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 BPIFA3Q9BQP9 254 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 SPXQ9BT56 116 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 WDR61Q9GZS3 305 aaKnown RBP-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 NMRAL1Q9HBL8 299 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 BCL2L10Q9HD36 194 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 HIGD1BQ9P298 99 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 PSME2Q9UL46 239 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 UBE2D4Q9Y2X8 147 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 NDUFAF1Q9Y375 327 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 SCN8AQ9UQD0 1980 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 WNK3Q9BYP7 1800 aa-1.89□□□□□ -2.71
CDKL5-210ENST00000636046 DOCK5Q9H7D0 1870 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 TRAV9-1A0A075B6T8 112 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 TRAV27A0A087WT01 109 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 A0A1B0GX12 115 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 ANKRD20A5PA0PJZ0 165 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 TMEM238C9JI98 176 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 I3L521 148 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 TPST1O60507 370 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 SCGB1D1O95968 90 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 AK1P00568 194 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 IVLP07476 585 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 SETSIPP0DME0 302 aa-1.9□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms