RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SULT1B1O43704 296 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 ORC5O43913 435 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 MPZL2O60487 215 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 MPDU1O75352 247 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 DCTN3O75935 186 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 RPP14O95059 124 aaKnown RBP1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 IGHV3-7P01780 117 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 EIF4EP06730 217 aaKnown RBP1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 CD3GP09693 182 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 OR8U9P0C7N5 309 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 LIMS3P0CW19 117 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 LIMS4P0CW20 117 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 SAA2P0DJI9 122 aaPredicted RBP1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 CD37P11049 281 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 RAB3AP20336 220 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 RAB5AP20339 215 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 PRKACBP22694 351 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 NFYBP25208 207 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 CNTFRP26992 372 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 BLVRBP30043 206 aaPredicted RBP1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 PFN2P35080 140 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 POLR2IP36954 125 aaKnown RBP1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 RPS10P46783 165 aaKnown RBP1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 REG1BP48304 166 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 GNG10P50151 68 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 RPS11P62280 158 aaKnown RBP eCLIP1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 SNRPGP62308 76 aaKnown RBP1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 SLC35B1P78383 322 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 MPV17LQ2QL34 196 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 KLK9Q2XQG4 91 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF691Q5VV52 312 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 TMEM244Q5VVB8 128 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 ZFAND6Q6FIF0 208 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 XAF1Q6GPH4 301 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 TRAPPC6BQ86SZ2 158 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 LINC00596Q86U02 117 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 PCP2Q8IVA1 136 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 SYS1Q8N2H4 156 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 TCTEX1D1Q8N7M0 179 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 Q8N976 141 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 C11orf72Q8NBR9 251 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 DUSP18Q8NEJ0 188 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 OR5D18Q8NGL1 313 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 OR2T10Q8NGZ9 312 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 PGLYRP3Q96LB9 341 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 RDH12Q96NR8 316 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 AGMATQ9BSE5 352 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 CHAC1Q9BUX1 264 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 MRPL20Q9BYC9 149 aaKnown RBP1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 PRRG3Q9BZD7 231 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 NAA50Q9GZZ1 169 aaKnown RBP1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 ALX4Q9H161 411 aaPredicted RBP1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 TVP23BQ9NYZ1 205 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 GNG8Q9UK08 70 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 KLK9Q9UKQ9 250 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 FLVCR2Q9UPI3 526 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 POMPQ9Y244 141 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 ARL2BPQ9Y2Y0 163 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 NUBP2Q9Y5Y2 271 aa1.6□□□□□ -2.15
SMARCB1-208ENST00000634926 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 TRAV8-7A0A075B6U6 113 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 TRBV6-6A0A0A6YYG2 114 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 TRAV41A0A0B4J266 112 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 IGHV3-66A0A0C4DH42 116 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 TMEM30CPA0ZSE6 113 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 IZUMO1RA6ND01 250 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 A8MWP6 167 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 ANKRD65E5RJM6 399 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 INS-IGF2F8WCM5 200 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 LINC01619G3V211 115 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 H0Y9J4 135 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 H0YJW9 148 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 H3BSH0 61 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 H3BUA1 57 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 H7C1H1 209 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 TOR1AO14656 332 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 ITGB1BP1O14713 200 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 CA11O75493 328 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 GABARAPO95166 117 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 FAM107AO95990 144 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 NAPSAO96009 420 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 HBZP02008 142 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 MT-ND4P03905 459 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 IGKV1-16P04430 117 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 GLAP06280 429 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 GZMHP20718 246 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 UBE2AP49459 152 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 MNAT1P51948 309 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 RAB25P57735 213 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 ACTBP60709 375 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 HES1Q14469 280 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 HMGN3Q15651 99 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 MORN2Q502X0 79 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 AKIRIN2Q53H80 203 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 C2orf83Q53S99 150 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 FAM27D1Q5T7N8 215 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF660Q6AZW8 331 aaPredicted RBP1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF880Q6PDB4 577 aa1.59□□□□□ -2.15
SMARCB1-208ENST00000634926 PLET1Q6UQ28 207 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms