RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 NKX2-1P43699 371 aaPredicted RBP16.52■□□□□ 0.24
SF1-220ENST00000626028 USF2Q15853 346 aaPredicted RBP16.52■□□□□ 0.24
SF1-220ENST00000626028 APRG1Q8IVJ8 170 aa16.52■□□□□ 0.24
SF1-220ENST00000626028 OR4D5Q8NGN0 318 aa16.52■□□□□ 0.24
SF1-220ENST00000626028 GLMPQ8WWB7 406 aa16.52■□□□□ 0.24
SF1-220ENST00000626028 RNF125Q96EQ8 232 aa16.52■□□□□ 0.24
SF1-220ENST00000626028 TRGV9Q99603 122 aa16.52■□□□□ 0.24
SF1-220ENST00000626028 MAGT1Q9H0U3 335 aa16.52■□□□□ 0.24
SF1-220ENST00000626028 SEPSECSQ9HD40 501 aaKnown RBP16.52■□□□□ 0.24
SF1-220ENST00000626028 K7EQG2 157 aa16.51■□□□□ 0.23
SF1-220ENST00000626028 BUB3O43684 328 aa16.51■□□□□ 0.23
SF1-220ENST00000626028 TCRBP04435 133 aa16.51■□□□□ 0.23
SF1-220ENST00000626028 DCANP1Q8TF63 244 aa16.51■□□□□ 0.23
SF1-220ENST00000626028 STRAPQ9Y3F4 350 aaKnown RBP16.51■□□□□ 0.23
SF1-220ENST00000626028 KMT2CQ8NEZ4 4911 aaKnown RBP16.5■□□□□ 0.23
SF1-220ENST00000626028 IGKV1D-37A0A075B6S9 117 aa16.5■□□□□ 0.23
SF1-220ENST00000626028 A6NHS1 94 aa16.5■□□□□ 0.23
SF1-220ENST00000626028 SNRPGP15A8MWD9 76 aa16.5■□□□□ 0.23
SF1-220ENST00000626028 PRSS46E5RG02 174 aa16.5■□□□□ 0.23
SF1-220ENST00000626028 SPRY2O43597 315 aa16.5■□□□□ 0.23
SF1-220ENST00000626028 THAP8Q8NA92 274 aa16.5■□□□□ 0.23
SF1-220ENST00000626028 STXBP6Q8NFX7 210 aa16.5■□□□□ 0.23
SF1-220ENST00000626028 CSTL1Q9H114 145 aa16.5■□□□□ 0.23
SF1-220ENST00000626028 AGRNO00468 2067 aa16.49■□□□□ 0.23
SF1-220ENST00000626028 CSMD3Q7Z407 3707 aa16.49■□□□□ 0.23
SF1-220ENST00000626028 MPTX1A8MV57 137 aa16.49■□□□□ 0.23
SF1-220ENST00000626028 SPANXN5Q5MJ07 72 aa16.49■□□□□ 0.23
SF1-220ENST00000626028 C1orf194Q5T5A4 169 aa16.49■□□□□ 0.23
SF1-220ENST00000626028 RNF183Q96D59 192 aa16.49■□□□□ 0.23
SF1-220ENST00000626028 SMIM8Q96KF7 97 aa16.49■□□□□ 0.23
SF1-220ENST00000626028 PAIP2BQ9ULR5 123 aaKnown RBP16.49■□□□□ 0.23
SF1-220ENST00000626028 TENM2Q9NT68 2774 aa16.49■□□□□ 0.23
SF1-220ENST00000626028 RPL35AP18077 110 aaKnown RBP16.48■□□□□ 0.23
SF1-220ENST00000626028 TAS2R30P59541 319 aa16.48■□□□□ 0.23
SF1-220ENST00000626028 DEFB131AP59861 70 aa16.48■□□□□ 0.23
SF1-220ENST00000626028 RAB40CQ96S21 281 aa16.48■□□□□ 0.23
SF1-220ENST00000626028 NUDT15Q9NV35 164 aa16.48■□□□□ 0.23
SF1-220ENST00000626028 ATF4P18848 351 aaPredicted RBP16.47■□□□□ 0.23
SF1-220ENST00000626028 POLR2GP62487 172 aaKnown RBP eCLIP16.47■□□□□ 0.23
SF1-220ENST00000626028 ZNF90Q03938 601 aa16.47■□□□□ 0.23
SF1-220ENST00000626028 IAH1Q2TAA2 248 aaPredicted RBP16.47■□□□□ 0.23
SF1-220ENST00000626028 MZT2BQ6NZ67 158 aa16.47■□□□□ 0.23
SF1-220ENST00000626028 SIGLEC15Q6ZMC9 328 aa16.47■□□□□ 0.23
SF1-220ENST00000626028 GATAD1Q8WUU5 269 aa16.47■□□□□ 0.23
SF1-220ENST00000626028 WDR12Q9GZL7 423 aaKnown RBP16.47■□□□□ 0.23
SF1-220ENST00000626028 PTTG2Q9NZH5 202 aa16.47■□□□□ 0.23
SF1-220ENST00000626028 FBXL17Q9UF56 701 aa16.47■□□□□ 0.23
SF1-220ENST00000626028 S100A7P31151 101 aa16.46■□□□□ 0.23
SF1-220ENST00000626028 DEFB135Q30KP9 77 aa16.46■□□□□ 0.23
SF1-220ENST00000626028 TMEM41BQ5BJD5 291 aa16.46■□□□□ 0.23
SF1-220ENST00000626028 NRN1Q9NPD7 142 aa16.46■□□□□ 0.23
SF1-220ENST00000626028 PSENENQ9NZ42 101 aa16.46■□□□□ 0.23
SF1-220ENST00000626028 SLC45A2Q9UMX9 530 aa16.46■□□□□ 0.23
SF1-220ENST00000626028 IGKV1OR2-108A0A075B7D4 117 aa16.45■□□□□ 0.22
SF1-220ENST00000626028 FNDC10F2Z333 226 aa16.45■□□□□ 0.22
SF1-220ENST00000626028 SNRPD3P62318 126 aaKnown RBP16.45■□□□□ 0.22
SF1-220ENST00000626028 ASAH1Q13510 395 aa16.45■□□□□ 0.22
SF1-220ENST00000626028 ZNF124Q15973 351 aa16.45■□□□□ 0.22
SF1-220ENST00000626028 TMEM144Q7Z5S9 345 aa16.45■□□□□ 0.22
SF1-220ENST00000626028 ZBTB8BQ8NAP8 495 aaPredicted RBP16.45■□□□□ 0.22
SF1-220ENST00000626028 FAM240BA0A1B0GVZ2 78 aa16.44■□□□□ 0.22
SF1-220ENST00000626028 SSSCA1O60232 199 aa16.44■□□□□ 0.22
SF1-220ENST00000626028 TSC22D2O75157 780 aa16.44■□□□□ 0.22
SF1-220ENST00000626028 STHQ8IWL8 128 aa16.44■□□□□ 0.22
SF1-220ENST00000626028 FAM24BQ8N5W8 94 aa16.44■□□□□ 0.22
SF1-220ENST00000626028 ZNF431Q8TF32 576 aaPredicted RBP16.44■□□□□ 0.22
SF1-220ENST00000626028 PBDC1Q9BVG4 233 aa16.44■□□□□ 0.22
SF1-220ENST00000626028 TRAV6A0A075B6T7 132 aa16.43■□□□□ 0.22
SF1-220ENST00000626028 H3BP45 60 aa16.43■□□□□ 0.22
SF1-220ENST00000626028 H2AFB2P0C5Z0 115 aa16.43■□□□□ 0.22
SF1-220ENST00000626028 ZNF688P0C7X2 276 aa16.43■□□□□ 0.22
SF1-220ENST00000626028 ZNF846Q147U1 533 aa16.43■□□□□ 0.22
SF1-220ENST00000626028 SAMD13Q5VXD3 122 aa16.43■□□□□ 0.22
SF1-220ENST00000626028 LEMD1Q68G75 181 aa16.43■□□□□ 0.22
SF1-220ENST00000626028 TMEM14EPQ6UXP3 125 aa16.43■□□□□ 0.22
SF1-220ENST00000626028 BATF3Q9NR55 127 aa16.43■□□□□ 0.22
SF1-220ENST00000626028 SPP1P10451 314 aa16.42■□□□□ 0.22
SF1-220ENST00000626028 LYZP61626 148 aa16.42■□□□□ 0.22
SF1-220ENST00000626028 DLK1P80370 383 aa16.42■□□□□ 0.22
SF1-220ENST00000626028 AKR1C1Q04828 323 aa16.42■□□□□ 0.22
SF1-220ENST00000626028 ACOT7LQ6ZUV0 252 aa16.42■□□□□ 0.22
SF1-220ENST00000626028 TMEM217Q8N7C4 229 aa16.42■□□□□ 0.22
SF1-220ENST00000626028 BPIFCQ8NFQ6 507 aa16.42■□□□□ 0.22
SF1-220ENST00000626028 TBC1D24Q9ULP9 559 aa16.42■□□□□ 0.22
SF1-220ENST00000626028 PMS2P5A8MQ11 134 aa16.41■□□□□ 0.22
SF1-220ENST00000626028 PAX9P55771 341 aa16.41■□□□□ 0.22
SF1-220ENST00000626028 ZFAND6Q6FIF0 208 aa16.41■□□□□ 0.22
SF1-220ENST00000626028 MORN3Q6PF18 240 aaPredicted RBP16.41■□□□□ 0.22
SF1-220ENST00000626028 TRPT1Q86TN4 253 aaKnown RBP16.41■□□□□ 0.22
SF1-220ENST00000626028 GSKIPQ9P0R6 139 aa16.41■□□□□ 0.22
SF1-220ENST00000626028 UPK1BO75841 260 aa16.4■□□□□ 0.22
SF1-220ENST00000626028 SELENOTP62341 195 aa16.4■□□□□ 0.22
SF1-220ENST00000626028 C12orf45Q8N5I9 185 aaPredicted RBP16.4■□□□□ 0.22
SF1-220ENST00000626028 OR10P1Q8NGE3 313 aa16.4■□□□□ 0.22
SF1-220ENST00000626028 GGACTQ9BVM4 153 aa16.4■□□□□ 0.22
SF1-220ENST00000626028 RCL1Q9Y2P8 373 aaKnown RBP16.4■□□□□ 0.22
SF1-220ENST00000626028 SCGB1D2O95969 90 aa16.39■□□□□ 0.21
SF1-220ENST00000626028 MBPP02686 304 aaPredicted RBP16.39■□□□□ 0.21
SF1-220ENST00000626028 IL5P05113 134 aa16.39■□□□□ 0.21
SF1-220ENST00000626028 OR2F1Q13607 317 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms