RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 ARTNQ5T4W7 220 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 LURAP1LQ8IV03 231 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 MTURNQ8N3F0 131 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 C9orf106Q8NAJ2 232 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 OTORQ9NRC9 128 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 PLCE1Q9P212 2302 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 A0A1B0GW15 77 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 TCRBV4S1A1TA0A5B7 111 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 TMEM50AO95807 157 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 PRCDQ00LT1 54 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 MEF2CQ06413 473 aaPredicted RBP4.66□□□□□ -1.66
ERCC6-213ENST00000624341 FAM71F2Q6NXP2 309 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 SLX1AQ9BQ83 275 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 MCRIP2Q9BUT9 160 aaKnown RBP4.66□□□□□ -1.66
ERCC6-213ENST00000624341 PSG8Q9UQ74 426 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 LINC00312Q9Y6C7 94 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 LOC102723996A0A087X1L8 192 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 CLPSP04118 112 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 FAM106AQ4KMX7 169 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 EEF1AKMT3Q96AZ1 226 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 MGST2Q99735 147 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 A8MWP6 167 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 TSPAN13O95857 204 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 EVI2AP22794 236 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 FXYD7P58549 80 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 ST20Q9HBF5 79 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 HTTP42858 3142 aa4.66□□□□□ -1.66
ERCC6-213ENST00000624341 A0A087X0K7 114 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 FABP5P3A8MUU1 101 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 LILRA1O75019 489 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 CEACAM4O75871 244 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 PPP1R17O96001 155 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 MYOD1P15172 320 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 ASIPP42127 132 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 TMPRSS3P57727 454 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 SUMO2P61956 95 aaKnown RBP4.65□□□□□ -1.66
ERCC6-213ENST00000624341 OR4X2Q8NGF9 303 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 IFI27L1Q96BM0 104 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 LSM4Q9Y4Z0 139 aaKnown RBP4.65□□□□□ -1.66
ERCC6-213ENST00000624341 E9PLN8 166 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 EFEMP2O95967 443 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 TRGV3P03979 118 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 NTF4P34130 210 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 ZNF138P52744 262 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 ZNF585BQ52M93 769 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 CLEC19AQ6UXS0 136 aa4.65□□□□□ -1.66
ERCC6-213ENST00000624341 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.65□□□□□ -1.66
ERCC6-213ENST00000624341 PTPRDP23468 1912 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 B9A039 149 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 E9PQ18 207 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 BSPH1Q075Z2 132 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 C1orf162Q8NEQ5 155 aaPredicted RBP4.65□□□□□ -1.67
ERCC6-213ENST00000624341 RNF125Q96EQ8 232 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 USF3Q68DE3 2245 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 DOCK8Q8NF50 2099 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 TDGF1P3P51864 188 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 PAPPA-AS1Q5QFB9 102 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 GGNQ86UU5 652 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 PPP1R27Q86WC6 154 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 FAM90A1Q86YD7 464 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 CHCHD1Q96BP2 118 aaKnown RBP4.65□□□□□ -1.67
ERCC6-213ENST00000624341 METRNQ9UJH8 293 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 MRPS18CQ9Y3D5 142 aaKnown RBP4.65□□□□□ -1.67
ERCC6-213ENST00000624341 ZNF407Q9C0G0 2248 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 TRAV8-2A0A0B4J237 113 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 LINC00473A8K010 186 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 NPIPB5A8MRT5 1133 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 C17orf100A8MU93 164 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 IGHV2-70P01814 119 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 C20orf204Q6ZNR8 217 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 EXOC3-AS1Q8N2X6 119 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 PRSS33Q8NF86 280 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 HS3ST6Q96QI5 342 aa4.65□□□□□ -1.67
ERCC6-213ENST00000624341 DPM2O94777 84 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 NCR2O95944 276 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 APOBEC3AP31941 199 aaPredicted RBP4.64□□□□□ -1.67
ERCC6-213ENST00000624341 SRSF7Q16629 238 aaKnown RBP eCLIP4.64□□□□□ -1.67
ERCC6-213ENST00000624341 OR5AN1Q8NGI8 311 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 OR13C6PQ8NH95 151 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 ARPC1AQ92747 370 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 LOXL4Q96JB6 756 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 SIGMAR1Q99720 223 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 SNHG12Q9BXW3 62 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 HEATR5AQ86XA9 2040 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 ABCA4P78363 2273 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 SEC11AP67812 179 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 GUSBP1Q15486 140 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 DEFB121Q5J5C9 76 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 TPTE2P1Q5T6R2 138 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 SAMD5Q5TGI4 173 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 C10orf126Q8N4M7 172 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 GLMPQ8WWB7 406 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 ZNF479Q96JC4 524 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 POLR3KQ9Y2Y1 108 aaPredicted RBP4.64□□□□□ -1.67
ERCC6-213ENST00000624341 DENND4AQ7Z401 1863 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 CDK2AP2O75956 126 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 DNAL4O96015 105 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 PFN1P07737 140 aaKnown RBP4.64□□□□□ -1.67
ERCC6-213ENST00000624341 UBE2V1Q13404 147 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 MLANAQ16655 118 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms