RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 THYN1Q9P016 225 aa12.33□□□□□ -0.44
PMS1-221ENST00000624204 AKAP6Q13023 2319 aa12.33□□□□□ -0.44
PMS1-221ENST00000624204 SSBP2P81877 361 aaPredicted RBP12.33□□□□□ -0.44
PMS1-221ENST00000624204 KLF14Q8TD94 323 aaPredicted RBP12.33□□□□□ -0.44
PMS1-221ENST00000624204 GTSF1Q8WW33 167 aa12.33□□□□□ -0.44
PMS1-221ENST00000624204 CSMD1Q96PZ7 3565 aa12.33□□□□□ -0.44
PMS1-221ENST00000624204 NCR2O95944 276 aa12.33□□□□□ -0.44
PMS1-221ENST00000624204 C11orf53Q8IXP5 236 aa12.33□□□□□ -0.44
PMS1-221ENST00000624204 CD177Q8N6Q3 437 aa12.33□□□□□ -0.44
PMS1-221ENST00000624204 FOXA2Q9Y261 457 aaPredicted RBP12.33□□□□□ -0.44
PMS1-221ENST00000624204 PGPA6NDG6 321 aa12.32□□□□□ -0.44
PMS1-221ENST00000624204 TNFSF15O95150 251 aa12.32□□□□□ -0.44
PMS1-221ENST00000624204 PRDX2P32119 198 aa12.32□□□□□ -0.44
PMS1-221ENST00000624204 RAB30Q15771 203 aa12.32□□□□□ -0.44
PMS1-221ENST00000624204 FAM173AQ9BQD7 235 aa12.32□□□□□ -0.44
PMS1-221ENST00000624204 PRSS47A8MTI9 375 aa12.32□□□□□ -0.44
PMS1-221ENST00000624204 APOHP02749 345 aaPredicted RBP12.32□□□□□ -0.44
PMS1-221ENST00000624204 IL11RAQ14626 422 aa12.32□□□□□ -0.44
PMS1-221ENST00000624204 C10orf113Q5VZT2 155 aa12.32□□□□□ -0.44
PMS1-221ENST00000624204 AP5S1Q9NUS5 200 aa12.32□□□□□ -0.44
PMS1-221ENST00000624204 B4GALT7Q9UBV7 327 aa12.32□□□□□ -0.44
PMS1-221ENST00000624204 H3BRM9 83 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 PRB3Q04118 309 aaPredicted RBP12.31□□□□□ -0.44
PMS1-221ENST00000624204 C19orf24Q9BVV8 132 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 JPT1Q9UK76 154 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.31□□□□□ -0.44
PMS1-221ENST00000624204 MOSP00540 346 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 AZU1P20160 251 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 ADTRPQ96IZ2 230 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 DUSP23Q9BVJ7 150 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 LY6G6EA0A0G2JKS1 128 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 SAA2P0DJI9 122 aaPredicted RBP12.31□□□□□ -0.44
PMS1-221ENST00000624204 RNFT1Q5M7Z0 435 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 LINC01545Q5VT33 79 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 OR2Z1Q8NG97 314 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 PRSS3P2Q8NHM4 247 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 U3KQA8 63 aa12.31□□□□□ -0.44
PMS1-221ENST00000624204 Q71RC1 249 aaPredicted RBP12.3□□□□□ -0.44
PMS1-221ENST00000624204 FA2HQ7L5A8 372 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 PDPNQ86YL7 162 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 RBMXL3Q8N7X1 1067 aaKnown RBP12.3□□□□□ -0.44
PMS1-221ENST00000624204 VSTM2AQ8TAG5 236 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 MRPL32Q9BYC8 188 aaKnown RBP12.3□□□□□ -0.44
PMS1-221ENST00000624204 NPFFR1Q9GZQ6 430 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 PPIAL4CA0A0B4J2A2 164 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 IQCF6A8MYZ5 107 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 PATE3B3GLJ2 98 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 PPIAL4GP0DN37 164 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 KIR2DS2P43631 304 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 C10orf55Q5SWW7 151 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 PEAR1Q5VY43 1037 aaPredicted RBP12.3□□□□□ -0.44
PMS1-221ENST00000624204 SMRP1Q8NCR6 262 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 ZGRF1Q86YA3 2104 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 SPTBN1Q01082 2364 aaKnown RBP12.3□□□□□ -0.44
PMS1-221ENST00000624204 TEX48A0A1B0GUV7 120 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 PPP1R32Q7Z5V6 425 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 GPR82Q96P67 336 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 CXXC4Q9H2H0 198 aa12.3□□□□□ -0.44
PMS1-221ENST00000624204 LAMA5O15230 3695 aa12.29□□□□□ -0.44
PMS1-221ENST00000624204 DSCAML1Q8TD84 2053 aa12.29□□□□□ -0.44
PMS1-221ENST00000624204 RBPMS2Q6ZRY4 209 aaKnown RBP12.29□□□□□ -0.44
PMS1-221ENST00000624204 NEGR1Q7Z3B1 354 aa12.29□□□□□ -0.44
PMS1-221ENST00000624204 TTTY13Q9BZ97 58 aa12.29□□□□□ -0.44
PMS1-221ENST00000624204 PRNDQ9UKY0 176 aa12.29□□□□□ -0.44
PMS1-221ENST00000624204 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
PMS1-221ENST00000624204 J3QW42 95 aa12.29□□□□□ -0.44
PMS1-221ENST00000624204 COL8A1P27658 744 aa12.29□□□□□ -0.44
PMS1-221ENST00000624204 PILRBQ9UKJ0 227 aa12.29□□□□□ -0.44
PMS1-221ENST00000624204 PTPRBP23467 1997 aa12.29□□□□□ -0.44
PMS1-221ENST00000624204 A1L4Q6 167 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 FABP2P12104 132 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 ACP1P24666 158 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 CSN1S1P47710 185 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 CD69Q07108 199 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 IGKV1-16P04430 117 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 PRCDQ00LT1 54 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 LCNL1Q6ZST4 164 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 PRR7Q8TB68 274 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 NEU4Q8WWR8 484 aaPredicted RBP12.28□□□□□ -0.44
PMS1-221ENST00000624204 NPIPB3Q92617 1050 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 C18orf15Q96N68 181 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 ZNF747Q9BV97 191 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 GCSHP23434 173 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 BMI1P35226 326 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 CT45A1Q5HYN5 189 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 DUX4L9Q6RFH8 374 aaPredicted RBP12.28□□□□□ -0.44
PMS1-221ENST00000624204 LINC00305Q7Z4B0 112 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 FAM90A1Q86YD7 464 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 CT45A3Q8NHU0 189 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 DDB2Q92466 427 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 C7orf69Q9H7B7 122 aa12.28□□□□□ -0.44
PMS1-221ENST00000624204 A0A1W2PPM0 123 aa12.27□□□□□ -0.44
PMS1-221ENST00000624204 FCER1GP30273 86 aa12.27□□□□□ -0.44
PMS1-221ENST00000624204 LOXL3P58215 753 aa12.27□□□□□ -0.44
PMS1-221ENST00000624204 SFTA2Q6UW10 78 aa12.27□□□□□ -0.44
PMS1-221ENST00000624204 GUCD1Q96NT3 240 aa12.27□□□□□ -0.44
PMS1-221ENST00000624204 CALYQ9NYX4 217 aa12.27□□□□□ -0.44
PMS1-221ENST00000624204 FNDC10F2Z333 226 aa12.27□□□□□ -0.45
PMS1-221ENST00000624204 FAM87AP0C7U9 286 aa12.27□□□□□ -0.45
PMS1-221ENST00000624204 TTTY12Q9BZ98 90 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms