RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PRRC2CQ9Y520 2896 aaKnown RBP11.37□□□□□ -0.59
LDB3-209ENST00000623056 PGPA6NDG6 321 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 E7EUB6 86 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 CHEK1O14757 476 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 DSCAMO60469 2012 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 COX8AP10176 69 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 ARF6P62330 175 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 ERHP84090 104 aaKnown RBP11.37□□□□□ -0.59
LDB3-209ENST00000623056 MSMPQ1L6U9 139 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 LINC01545Q5VT33 79 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 ITLN1Q8WWA0 313 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 RND1Q92730 232 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 NCOR1P1Q9H4R4 102 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 SAP30O75446 220 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 VHLLQ6RSH7 139 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 TMUB1Q9BVT8 246 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 HEATR1Q9H583 2144 aaKnown RBP11.37□□□□□ -0.59
LDB3-209ENST00000623056 ZNF492Q9P255 531 aa11.37□□□□□ -0.59
LDB3-209ENST00000623056 TIMM8BQ9Y5J9 83 aaPredicted RBP11.37□□□□□ -0.59
LDB3-209ENST00000623056 IGHV1-18A0A0C4DH31 117 aa11.36□□□□□ -0.59
LDB3-209ENST00000623056 A0A1W2PNU3 283 aaPredicted RBP11.36□□□□□ -0.59
LDB3-209ENST00000623056 SNAI2O43623 268 aa11.36□□□□□ -0.59
LDB3-209ENST00000623056 LTAP01374 205 aa11.36□□□□□ -0.59
LDB3-209ENST00000623056 RBMXL3Q8N7X1 1067 aaKnown RBP11.36□□□□□ -0.59
LDB3-209ENST00000623056 GFRA4Q9GZZ7 299 aa11.36□□□□□ -0.59
LDB3-209ENST00000623056 MRPL36Q9P0J6 103 aaKnown RBP11.36□□□□□ -0.59
LDB3-209ENST00000623056 LHBP01229 141 aa11.36□□□□□ -0.59
LDB3-209ENST00000623056 IGLV1-44P01699 117 aa11.36□□□□□ -0.59
LDB3-209ENST00000623056 SLC25A48Q6ZT89 311 aaKnown RBP11.36□□□□□ -0.59
LDB3-209ENST00000623056 LHFPL4Q7Z7J7 247 aa11.36□□□□□ -0.59
LDB3-209ENST00000623056 BPIFA4PQ86YQ2 179 aa11.36□□□□□ -0.59
LDB3-209ENST00000623056 TANC2Q9HCD6 1990 aa11.36□□□□□ -0.59
LDB3-209ENST00000623056 KNTC1P50748 2209 aa11.36□□□□□ -0.59
LDB3-209ENST00000623056 NAV3Q8IVL0 2385 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 FAM231BA6NCW3 169 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 GAGE10A6NGK3 116 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 PPIAL4DF5H284 164 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 CSN3P07498 182 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 HTR1DP28221 377 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 SEC11AP67812 179 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 GUSBP1Q15486 140 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 THAP8Q8NA92 274 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 C1orf162Q8NEQ5 155 aaPredicted RBP11.35□□□□□ -0.59
LDB3-209ENST00000623056 FMC1Q96HJ9 113 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 HARBI1Q96MB7 349 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 CACNA1HO95180 2353 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 APOA2P02652 100 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 RIPPLY3P57055 190 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 WT1-ASQ06250 92 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 TMEM97Q5BJF2 176 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 UFSP1Q6NVU6 142 aa11.35□□□□□ -0.59
LDB3-209ENST00000623056 NEU4Q8WWR8 484 aaPredicted RBP11.35□□□□□ -0.59
LDB3-209ENST00000623056 DAZAP1Q96EP5 407 aaKnown RBP11.35□□□□□ -0.59
LDB3-209ENST00000623056 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.34□□□□□ -0.59
LDB3-209ENST00000623056 TMEM238C9JI98 176 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 ORM2P19652 201 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 KIR2DL2P43627 348 aaPredicted RBP11.34□□□□□ -0.59
LDB3-209ENST00000623056 HES3Q5TGS1 186 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 DHRS13Q6UX07 377 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 STXBP6Q8NFX7 210 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 OSR1Q8TAX0 266 aaPredicted RBP11.34□□□□□ -0.59
LDB3-209ENST00000623056 PERPQ96FX8 193 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 RPUSD1Q9UJJ7 312 aaKnown RBP11.34□□□□□ -0.59
LDB3-209ENST00000623056 ASPMQ8IZT6 3477 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 DSPP15924 2871 aaKnown RBP11.34□□□□□ -0.59
LDB3-209ENST00000623056 CGB1A6NKQ9 187 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 INS-IGF2F8WCM5 200 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 NBEAP1P0C6P0 100 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 UQCRFS1P47985 274 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 C10orf55Q5SWW7 151 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 TEX45Q8NA69 505 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 FER1L6-AS1Q8NA97 138 aa11.34□□□□□ -0.59
LDB3-209ENST00000623056 MRPL20Q9BYC9 149 aaKnown RBP11.34□□□□□ -0.59
LDB3-209ENST00000623056 H3BTX0 84 aa11.33□□□□□ -0.6
LDB3-209ENST00000623056 HAX1O00165 279 aa11.33□□□□□ -0.6
LDB3-209ENST00000623056 SPRY3O43610 288 aa11.33□□□□□ -0.6
LDB3-209ENST00000623056 NCR2O95944 276 aa11.33□□□□□ -0.6
LDB3-209ENST00000623056 APOHP02749 345 aaPredicted RBP11.33□□□□□ -0.6
LDB3-209ENST00000623056 C5orf17Q8NAS9 161 aa11.33□□□□□ -0.6
LDB3-209ENST00000623056 OR1B1Q8NGR6 318 aa11.33□□□□□ -0.6
LDB3-209ENST00000623056 ZNF747Q9BV97 191 aa11.33□□□□□ -0.6
LDB3-209ENST00000623056 ARFGEF3Q5TH69 2177 aa11.33□□□□□ -0.6
LDB3-209ENST00000623056 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
LDB3-209ENST00000623056 TCRAP04437 139 aa11.32□□□□□ -0.6
LDB3-209ENST00000623056 JMJD8Q96S16 334 aa11.32□□□□□ -0.6
LDB3-209ENST00000623056 ZNF833PQ6ZTB9 187 aa11.32□□□□□ -0.6
LDB3-209ENST00000623056 GTF2H5Q6ZYL4 71 aa11.32□□□□□ -0.6
LDB3-209ENST00000623056 C9orf106Q8NAJ2 232 aa11.32□□□□□ -0.6
LDB3-209ENST00000623056 DEFB108BQ8NET1 73 aa11.32□□□□□ -0.6
LDB3-209ENST00000623056 FAM222BQ8WU58 562 aa11.32□□□□□ -0.6
LDB3-209ENST00000623056 GAFA1Q96PS6 74 aa11.32□□□□□ -0.6
LDB3-209ENST00000623056 LINC00574Q9H8X3 128 aa11.32□□□□□ -0.6
LDB3-209ENST00000623056 DYSFO75923 2080 aa11.32□□□□□ -0.6
LDB3-209ENST00000623056 C9orf118A6NHY6 69 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 C22orf46C9J442 243 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 FAM87AP0C7U9 286 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 FGF6P10767 208 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 COL8A1P27658 744 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 RUSC1-AS1Q66K80 236 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 ZCCHC24Q8N2G6 241 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms