RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 PSG1P11464 419 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 RND2P52198 227 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 OR1B1Q8NGR6 318 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 FLYWCH2Q96CP2 140 aaKnown RBP7.49□□□□□ -1.21
GGA3-222ENST00000621217 NEU1Q99519 415 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 ST20Q9HBF5 79 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 AP5S1Q9NUS5 200 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 SOX21Q9Y651 276 aaPredicted RBP7.49□□□□□ -1.21
GGA3-222ENST00000621217 NBEAQ8NFP9 2946 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 IGHV3-35A0A0C4DH35 117 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 LOC389332A0A1B0GUA5 103 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 APOBEC3AP31941 199 aaPredicted RBP7.49□□□□□ -1.21
GGA3-222ENST00000621217 MORN2Q502X0 79 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 MBD3L1Q8WWY6 194 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 ANAPC13Q9BS18 74 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 LOC400499M0QZD8 3231 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 CHD3Q12873 2000 aaKnown RBP7.49□□□□□ -1.21
GGA3-222ENST00000621217 SAA2-SAA4A0A096LPE2 208 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 SAA2P0DJI9 122 aaPredicted RBP7.49□□□□□ -1.21
GGA3-222ENST00000621217 IGFBP2P18065 325 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 SPRNQ5BIV9 151 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 CENPWQ5EE01 88 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 RNASE6Q93091 150 aaKnown RBP7.49□□□□□ -1.21
GGA3-222ENST00000621217 S4R3C0 116 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 AKAP13Q12802 2813 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 TRAV1-1A0A0B4J248 108 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 FOXA3P55318 350 aaPredicted RBP7.48□□□□□ -1.21
GGA3-222ENST00000621217 RPL11P62913 178 aaKnown RBP7.48□□□□□ -1.21
GGA3-222ENST00000621217 KHDC1LQ5JSQ8 128 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 GTSF1LQ9H1H1 148 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 NCKAP5O14513 1909 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 IGKV1D-17A0A075B6S4 117 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 ESDP10768 282 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 DUTP33316 252 aaKnown RBP7.48□□□□□ -1.21
GGA3-222ENST00000621217 CA7P43166 264 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 CDKN1BP46527 198 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 VMA21Q3ZAQ7 101 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 PSMG4Q5JS54 123 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 DYSFO75923 2080 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 PPIAL4CA0A0B4J2A2 164 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 RBFOX2O43251 390 aaKnown RBP eCLIP7.48□□□□□ -1.21
GGA3-222ENST00000621217 IL4P05112 153 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 PPIAL4GP0DN37 164 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 CD33P20138 364 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 TSPOP30536 169 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 PAX2Q02962 417 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 ACTL10Q5JWF8 245 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 C10orf55Q5SWW7 151 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 C10orf113Q5VZT2 155 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 VKORC1Q9BQB6 163 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 PAXXQ9BUH6 204 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 THYN1Q9P016 225 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 DMXL1Q9Y485 3027 aa7.48□□□□□ -1.21
GGA3-222ENST00000621217 CGAP01215 116 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 STAG3L3P0CL85 134 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 MLANAQ16655 118 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 OR10J3Q5JRS4 329 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 STPG3Q8N7X2 389 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 SSBP3Q9BWW4 388 aaPredicted RBP7.47□□□□□ -1.21
GGA3-222ENST00000621217 JPT1Q9UK76 154 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 MRPS16Q9Y3D3 137 aaKnown RBP7.47□□□□□ -1.21
GGA3-222ENST00000621217 SCO2A0A1W2PP80 73 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 J3QW42 95 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 S100A4P26447 101 aaKnown RBP7.47□□□□□ -1.21
GGA3-222ENST00000621217 GCHFRP30047 84 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 EMP1P54849 157 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 HSPE1P61604 102 aaKnown RBP7.47□□□□□ -1.21
GGA3-222ENST00000621217 FOXL1Q12952 345 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 ADIPOQQ15848 244 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 SEM1Q6ZVN7 128 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 TEX29Q8N6K0 151 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 PERPQ96FX8 193 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 HIVEP2P31629 2446 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 TANC2Q9HCD6 1990 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 DMXL2Q8TDJ6 3036 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 LYZP61626 148 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 CLEC2AQ6UVW9 174 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 TTC9CQ8N5M4 171 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 IDI2-AS1Q9NZ38 188 aa7.47□□□□□ -1.21
GGA3-222ENST00000621217 SRRM5B3KS81 715 aa7.46□□□□□ -1.21
GGA3-222ENST00000621217 IFNL4K9M1U5 179 aa7.46□□□□□ -1.21
GGA3-222ENST00000621217 HBBP68871 147 aa7.46□□□□□ -1.21
GGA3-222ENST00000621217 SRSF7Q16629 238 aaKnown RBP eCLIP7.46□□□□□ -1.21
GGA3-222ENST00000621217 MPV17L2Q567V2 206 aa7.46□□□□□ -1.21
GGA3-222ENST00000621217 LYPD2Q6UXB3 125 aa7.46□□□□□ -1.21
GGA3-222ENST00000621217 HAPLN4Q86UW8 402 aa7.46□□□□□ -1.21
GGA3-222ENST00000621217 LYPD6BQ8NI32 183 aa7.46□□□□□ -1.21
GGA3-222ENST00000621217 TNFRSF14Q92956 283 aa7.46□□□□□ -1.21
GGA3-222ENST00000621217 PGLYRP4Q96LB8 373 aa7.46□□□□□ -1.21
GGA3-222ENST00000621217 IGKV3-7A0A075B6H7 116 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 MOSP00540 346 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 SPATA31B1PQ5VZV4 182 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 C22orf34Q6ZV56 151 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 TMUB1Q9BVT8 246 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 GNB1LQ9BYB4 327 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 MRPL20Q9BYC9 149 aaKnown RBP7.46□□□□□ -1.22
GGA3-222ENST00000621217 PRNDQ9UKY0 176 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 SORL1Q92673 2214 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 ACANP16112 2415 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 B9A039 149 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms