RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 H2BFSP57053 126 aa13.71□□□□□ -0.21
LITAF-220ENST00000620789 DLK1P80370 383 aa13.71□□□□□ -0.21
LITAF-220ENST00000620789 CYCSP99999 105 aaKnown RBP13.71□□□□□ -0.21
LITAF-220ENST00000620789 USF2Q15853 346 aaPredicted RBP13.71□□□□□ -0.21
LITAF-220ENST00000620789 TMEM231Q9H6L2 316 aa13.71□□□□□ -0.21
LITAF-220ENST00000620789 ALG5Q9Y673 324 aa13.71□□□□□ -0.21
LITAF-220ENST00000620789 IGHV3-66A0A0C4DH42 116 aa13.7□□□□□ -0.22
LITAF-220ENST00000620789 SMCO3A2RU48 225 aa13.7□□□□□ -0.22
LITAF-220ENST00000620789 FNDC10F2Z333 226 aa13.7□□□□□ -0.22
LITAF-220ENST00000620789 CD5P06127 495 aa13.7□□□□□ -0.22
LITAF-220ENST00000620789 HNRNPCP07910 306 aaKnown RBP eCLIP13.7□□□□□ -0.22
LITAF-220ENST00000620789 IGHV4-30-4P0DP06 118 aa13.7□□□□□ -0.22
LITAF-220ENST00000620789 RRAS2P62070 204 aaPredicted RBP13.7□□□□□ -0.22
LITAF-220ENST00000620789 RGS21Q2M5E4 152 aa13.7□□□□□ -0.22
LITAF-220ENST00000620789 FAM90A2PQ658T7 463 aa13.7□□□□□ -0.22
LITAF-220ENST00000620789 TMEM144Q7Z5S9 345 aa13.7□□□□□ -0.22
LITAF-220ENST00000620789 LILRB2Q8N423 598 aa13.7□□□□□ -0.22
LITAF-220ENST00000620789 RNF125Q96EQ8 232 aa13.7□□□□□ -0.22
LITAF-220ENST00000620789 NARS2Q96I59 477 aaKnown RBP13.7□□□□□ -0.22
LITAF-220ENST00000620789 LYRM2Q9NU23 88 aaPredicted RBP13.7□□□□□ -0.22
LITAF-220ENST00000620789 MGAT4CQ9UBM8 478 aa13.7□□□□□ -0.22
LITAF-220ENST00000620789 A8MZ25 164 aa13.69□□□□□ -0.22
LITAF-220ENST00000620789 DEDDO75618 318 aa13.69□□□□□ -0.22
LITAF-220ENST00000620789 ARL16Q0P5N6 197 aa13.69□□□□□ -0.22
LITAF-220ENST00000620789 TCF24Q7RTU0 167 aa13.69□□□□□ -0.22
LITAF-220ENST00000620789 U3KQE9 123 aa13.69□□□□□ -0.22
LITAF-220ENST00000620789 FAM24AA6NFZ4 105 aa13.68□□□□□ -0.22
LITAF-220ENST00000620789 OR4C46A6NHA9 309 aa13.68□□□□□ -0.22
LITAF-220ENST00000620789 DFFBO76075 338 aa13.68□□□□□ -0.22
LITAF-220ENST00000620789 FRMD6-AS1P0C7T7 363 aa13.68□□□□□ -0.22
LITAF-220ENST00000620789 OR2F1Q13607 317 aa13.68□□□□□ -0.22
LITAF-220ENST00000620789 GRAMD2BQ96HH9 432 aa13.68□□□□□ -0.22
LITAF-220ENST00000620789 PBDC1Q9BVG4 233 aa13.68□□□□□ -0.22
LITAF-220ENST00000620789 GGACTQ9BVM4 153 aa13.68□□□□□ -0.22
LITAF-220ENST00000620789 NPVFQ9HCQ7 196 aa13.68□□□□□ -0.22
LITAF-220ENST00000620789 RABAC1Q9UI14 185 aa13.68□□□□□ -0.22
LITAF-220ENST00000620789 DNAH9Q9NYC9 4486 aa13.67□□□□□ -0.22
LITAF-220ENST00000620789 CFDP00746 253 aaPredicted RBP13.67□□□□□ -0.22
LITAF-220ENST00000620789 RLN2P04090 185 aa13.67□□□□□ -0.22
LITAF-220ENST00000620789 P2RY1P47900 373 aa13.67□□□□□ -0.22
LITAF-220ENST00000620789 SLC38A11Q08AI6 406 aa13.67□□□□□ -0.22
LITAF-220ENST00000620789 LRRC37A5PQ49AS3 106 aa13.67□□□□□ -0.22
LITAF-220ENST00000620789 C19orf73Q9NVV2 129 aa13.67□□□□□ -0.22
LITAF-220ENST00000620789 COL7A1Q02388 2944 aa13.67□□□□□ -0.22
LITAF-220ENST00000620789 IGKV3-7A0A075B6H7 116 aa13.66□□□□□ -0.22
LITAF-220ENST00000620789 OR11H12B2RN74 326 aa13.66□□□□□ -0.22
LITAF-220ENST00000620789 CST7O76096 145 aa13.66□□□□□ -0.22
LITAF-220ENST00000620789 EIF2B2P49770 351 aaKnown RBP13.66□□□□□ -0.22
LITAF-220ENST00000620789 SULT1A1P50225 295 aa13.66□□□□□ -0.22
LITAF-220ENST00000620789 LYZP61626 148 aa13.66□□□□□ -0.22
LITAF-220ENST00000620789 DEFB125Q8N687 156 aa13.66□□□□□ -0.22
LITAF-220ENST00000620789 TMEM252Q8N6L7 170 aa13.66□□□□□ -0.22
LITAF-220ENST00000620789 BPIFCQ8NFQ6 507 aa13.66□□□□□ -0.22
LITAF-220ENST00000620789 PPP1R1CQ8WVI7 109 aa13.66□□□□□ -0.22
LITAF-220ENST00000620789 WFDC10AQ9H1F0 79 aa13.66□□□□□ -0.22
LITAF-220ENST00000620789 IGSF23A1L1A6 192 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 E5RGE8 158 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 H0YIZ8 118 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 RPL11P62913 178 aaKnown RBP13.65□□□□□ -0.22
LITAF-220ENST00000620789 PAFAH1B2P68402 229 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 OXA1LQ15070 435 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 TEPPQ6URK8 271 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 C16orf54Q6UWD8 224 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 TMEM182Q6ZP80 229 aaPredicted RBP13.65□□□□□ -0.22
LITAF-220ENST00000620789 CYP2G1PQ6ZSU1 146 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 STX12Q86Y82 276 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 TMEM217Q8N7C4 229 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 TUBA4BQ9H853 241 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 OR5AC2Q9NZP5 309 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 PFDN2Q9UHV9 154 aa13.65□□□□□ -0.22
LITAF-220ENST00000620789 BUB3O43684 328 aa13.64□□□□□ -0.23
LITAF-220ENST00000620789 GATA2P23769 480 aaPredicted RBP13.64□□□□□ -0.23
LITAF-220ENST00000620789 NUP62P37198 522 aaPredicted RBP13.64□□□□□ -0.23
LITAF-220ENST00000620789 TFPI2P48307 235 aa13.64□□□□□ -0.23
LITAF-220ENST00000620789 GBGT1Q8N5D6 347 aa13.64□□□□□ -0.23
LITAF-220ENST00000620789 GLMPQ8WWB7 406 aa13.64□□□□□ -0.23
LITAF-220ENST00000620789 MED28Q9H204 178 aa13.64□□□□□ -0.23
LITAF-220ENST00000620789 MS4A6AQ9H2W1 248 aa13.64□□□□□ -0.23
LITAF-220ENST00000620789 TRAV2A0A0B4J234 112 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 HELTA6NFD8 242 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 PET100P0DJ07 73 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 CXCL3P19876 107 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 S100A11P31949 105 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 SELENOTP62341 195 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 HBG1P69891 147 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 HBG2P69892 147 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 ODF3L2Q3SX64 289 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 SBSPONQ8IVN8 264 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 ASCL2Q99929 193 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 FAM110AQ9BQ89 295 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 SRD5A3Q9H8P0 318 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 UBQLN2Q9UHD9 624 aa13.63□□□□□ -0.23
LITAF-220ENST00000620789 DNASE2O00115 360 aaPredicted RBP13.62□□□□□ -0.23
LITAF-220ENST00000620789 MPC2O95563 127 aa13.62□□□□□ -0.23
LITAF-220ENST00000620789 NHLRC4P0CG21 123 aaPredicted RBP13.62□□□□□ -0.23
LITAF-220ENST00000620789 FCN2Q15485 313 aa13.62□□□□□ -0.23
LITAF-220ENST00000620789 VWC2Q2TAL6 325 aa13.62□□□□□ -0.23
LITAF-220ENST00000620789 SLC25A31Q9H0C2 315 aa13.62□□□□□ -0.23
LITAF-220ENST00000620789 UQCC1Q9NVA1 299 aa13.62□□□□□ -0.23
LITAF-220ENST00000620789 SLC45A2Q9UMX9 530 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms