RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 PRR20EP86478 221 aa7.47□□□□□ -1.21
RBFOX1-223ENST00000620507 PRR20CP86479 221 aa7.47□□□□□ -1.21
RBFOX1-223ENST00000620507 PRR20DP86480 221 aa7.47□□□□□ -1.21
RBFOX1-223ENST00000620507 PRR20BP86481 221 aa7.47□□□□□ -1.21
RBFOX1-223ENST00000620507 PRR20AP86496 221 aa7.47□□□□□ -1.21
RBFOX1-223ENST00000620507 NDFIP1Q9BT67 221 aa7.47□□□□□ -1.21
RBFOX1-223ENST00000620507 M0R2Z0 102 aa7.46□□□□□ -1.21
RBFOX1-223ENST00000620507 NPPCP23582 126 aa7.46□□□□□ -1.21
RBFOX1-223ENST00000620507 FCGR2BP31994 310 aaPredicted RBP7.46□□□□□ -1.21
RBFOX1-223ENST00000620507 GNG5P63218 68 aa7.46□□□□□ -1.21
RBFOX1-223ENST00000620507 LY96Q9Y6Y9 160 aa7.46□□□□□ -1.21
RBFOX1-223ENST00000620507 KMT2EQ8IZD2 1858 aa7.46□□□□□ -1.21
RBFOX1-223ENST00000620507 DYSFO75923 2080 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 A0A1W2PPI3 338 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 TIMM23O14925 209 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 IL4P05112 153 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 THBDP07204 575 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 ZNF137PP52743 207 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 DLX1P56177 255 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 WT1-ASQ06250 92 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 LHFPL4Q7Z7J7 247 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 KLHDC1Q8N7A1 406 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 LPAR2Q9HBW0 351 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 ARL2-SNX15V9GYD0 113 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 HCFC1P51610 2035 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 ARFGEF3Q5TH69 2177 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 DIRC3C9JPN6 131 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 M0QZK8 103 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 SERF1AO75920 110 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 LY6HO94772 140 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 CA1P00915 261 aaPredicted RBP7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 GOLT1AQ6ZVE7 132 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 C2orf88Q9BSF0 95 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 SIGLEC9Q9Y336 463 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 S4R3C0 116 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 PCSK5Q92824 1860 aa7.46□□□□□ -1.22
RBFOX1-223ENST00000620507 A6NNC1 897 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 BUB1B-PAK6H3BSN5 160 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 MFAP4P55083 255 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 TMEM256Q8N2U0 113 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 OR5R1Q8NH85 324 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 NEU4Q8WWR8 484 aaPredicted RBP7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 GPR82Q96P67 336 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 CDC42EP3Q9UKI2 254 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 EPDR1Q9UM22 224 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 TYMSP04818 313 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 GBGT1Q8N5D6 347 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 LINC00311Q8N616 119 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 CTSZQ9UBR2 303 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 ECSCRQ19T08 205 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 NUDT10Q8NFP7 164 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 PGLYRP4Q96LB8 373 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 IGF2RP11717 2491 aa7.45□□□□□ -1.22
RBFOX1-223ENST00000620507 NBR2O15453 112 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 CSN3P07498 182 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 FAM106CPP0CH98 169 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 C1orf229Q6ZS94 237 aaPredicted RBP7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 GRAMD2BQ96HH9 432 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 LINC00479Q96M42 142 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 PYGO2Q9BRQ0 406 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 GNB1LQ9BYB4 327 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 Q9H3A6 140 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 TRAV30A0A087WSZ9 112 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 TMEM238LA0A1B0GVL6 79 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 TMEM208Q9BTX3 173 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 TPSG1Q9NRR2 321 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 KAAG1Q9UBP8 84 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 IZUMO1RA6ND01 250 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 HIGD1CA8MV81 97 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 SHISA9B4DS77 424 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 GGTLC3B5MD39 225 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 NPSP0C0P6 89 aa7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 RPL11P62913 178 aaKnown RBP7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 GSX1Q9H4S2 264 aaPredicted RBP7.44□□□□□ -1.22
RBFOX1-223ENST00000620507 SCGB2A2Q13296 93 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 C8orf46Q8TAG6 207 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 TRGV9Q99603 122 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 PSG1P11464 419 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 CNTFRP26992 372 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 TDGF1P3P51864 188 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 RIGQ13278 110 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 C11orf52Q96A22 123 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 F11RQ9Y624 299 aaKnown RBP7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 TMSB15BA0A087X1C1 80 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 K7ERU9 68 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 GZMBP10144 247 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 CDKN1AP38936 164 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 FA2HQ7L5A8 372 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 PRSS3P2Q8NHM4 247 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 MSRB2Q9Y3D2 182 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 PLXNB1O43157 2135 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 IGHV3-35A0A0C4DH35 117 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 HNRNPA3P51991 378 aaKnown RBP7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 CX3CL1P78423 397 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 FMC1Q96HJ9 113 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 NDUFAF3Q9BU61 184 aa7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 FNDC4Q9H6D8 234 aaPredicted RBP7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 TBL2Q9Y4P3 447 aaKnown RBP7.43□□□□□ -1.22
RBFOX1-223ENST00000620507 TRBV20OR9-2A0A075B6H5 130 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 Q8NA96 180 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms