RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 WDR31Q8NA23 367 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 ARPC1AQ92747 370 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 ROS1P08922 2347 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 WIPF2Q8TF74 440 aaPredicted RBP12.88□□□□□ -0.35
SEMA3B-214ENST00000619119 RNF183Q96D59 192 aa12.88□□□□□ -0.35
SEMA3B-214ENST00000619119 MRPL16Q9NX20 251 aaKnown RBP12.88□□□□□ -0.35
SEMA3B-214ENST00000619119 PSG8Q9UQ74 426 aa12.88□□□□□ -0.35
SEMA3B-214ENST00000619119 OR2J3O76001 311 aa12.88□□□□□ -0.35
SEMA3B-214ENST00000619119 LINC00479Q96M42 142 aa12.88□□□□□ -0.35
SEMA3B-214ENST00000619119 PLEKHA3Q9HB20 300 aa12.88□□□□□ -0.35
SEMA3B-214ENST00000619119 DUSP13Q9UII6 198 aa12.88□□□□□ -0.35
SEMA3B-214ENST00000619119 MPC1Q9Y5U8 109 aa12.88□□□□□ -0.35
SEMA3B-214ENST00000619119 NBASA2RRP1 2371 aa12.88□□□□□ -0.35
SEMA3B-214ENST00000619119 A1L4Q6 167 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A10PA6NDY2 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A18PA6NE21 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A16PA6NEW6 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A20PA6NIJ5 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A8PA6NJQ4 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A7PA6NKC0 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A22PA8MWA6 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A12PA8MX19 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A5PA8MXJ8 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A23PA8MXZ1 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 TSPAN13O95857 204 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 LIPFP07098 398 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A15PP0C7V4 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A13PP0C7W8 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A14PP0C7W9 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM90A24PP0C7X0 464 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 ZNF137PP52743 207 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 INO80CQ6PI98 192 aaPredicted RBP12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 WDR86Q86TI4 376 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 OBP2BQ9NPH6 170 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 RELNP78509 3460 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 HIGD1CA8MV81 97 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 NCR2O95944 276 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 CECR9P0C854 216 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FGF6P10767 208 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 INSL3P51460 131 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 KLF14Q8TD94 323 aaPredicted RBP12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM215AQ9Y5M1 114 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 C17orf98A8MV24 154 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 LINC00205P59089 165 aa12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM53AQ6NSI3 398 aaPredicted RBP12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 SNRNP40Q96DI7 357 aaKnown RBP12.87□□□□□ -0.35
SEMA3B-214ENST00000619119 K7ERJ3 54 aa12.86□□□□□ -0.35
SEMA3B-214ENST00000619119 CEBPDP49716 269 aaPredicted RBP12.86□□□□□ -0.35
SEMA3B-214ENST00000619119 FAM162BQ5T6X4 162 aa12.86□□□□□ -0.35
SEMA3B-214ENST00000619119 ADTRPQ96IZ2 230 aa12.86□□□□□ -0.35
SEMA3B-214ENST00000619119 GGTLC3B5MD39 225 aa12.86□□□□□ -0.35
SEMA3B-214ENST00000619119 CNIH1O95406 144 aa12.86□□□□□ -0.35
SEMA3B-214ENST00000619119 IGHV3-7P01780 117 aa12.86□□□□□ -0.35
SEMA3B-214ENST00000619119 TIMM23BQ5SRD1 257 aa12.86□□□□□ -0.35
SEMA3B-214ENST00000619119 FOXI2Q6ZQN5 318 aa12.86□□□□□ -0.35
SEMA3B-214ENST00000619119 ZZEF1O43149 2961 aa12.86□□□□□ -0.35
SEMA3B-214ENST00000619119 TRAV24A0A0B4J272 114 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 TRAPPC2LQ9UL33 140 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 VWC2LB2RUY7 222 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 MPDU1O75352 247 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 IGKV3-15P01624 115 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 AREGP15514 252 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 LINC01545Q5VT33 79 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 RASL11AQ6T310 242 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 ZNF826PQ6ZT77 177 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 MBD6Q96DN6 1003 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 C18orf15Q96N68 181 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 VGLL1Q99990 258 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 RTL8AQ9BWD3 113 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 GCSHP23434 173 aa12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 HEYLQ9NQ87 328 aaPredicted RBP12.85□□□□□ -0.35
SEMA3B-214ENST00000619119 MBD3L4A6NDZ8 208 aaPredicted RBP12.84□□□□□ -0.35
SEMA3B-214ENST00000619119 MBD3L3A6NE82 208 aaPredicted RBP12.84□□□□□ -0.35
SEMA3B-214ENST00000619119 MBD3L5A6NJ08 208 aaPredicted RBP12.84□□□□□ -0.35
SEMA3B-214ENST00000619119 ZNF474Q6S9Z5 364 aaPredicted RBP12.84□□□□□ -0.35
SEMA3B-214ENST00000619119 OR4A16Q8NH70 328 aa12.84□□□□□ -0.35
SEMA3B-214ENST00000619119 MBD3L2Q8NHZ7 208 aaPredicted RBP12.84□□□□□ -0.35
SEMA3B-214ENST00000619119 PLPPR2Q96GM1 343 aa12.84□□□□□ -0.35
SEMA3B-214ENST00000619119 IGF2BP2-AS1Q96M15 143 aa12.84□□□□□ -0.35
SEMA3B-214ENST00000619119 TIMM8AO60220 97 aaPredicted RBP12.83□□□□□ -0.35
SEMA3B-214ENST00000619119 OR5AL1P0C617 328 aa12.83□□□□□ -0.35
SEMA3B-214ENST00000619119 SPINK8P0C7L1 97 aa12.83□□□□□ -0.35
SEMA3B-214ENST00000619119 P0C879 139 aa12.83□□□□□ -0.35
SEMA3B-214ENST00000619119 SMIM13P0DJ93 91 aa12.83□□□□□ -0.35
SEMA3B-214ENST00000619119 C20orf78Q9BR46 151 aa12.83□□□□□ -0.35
SEMA3B-214ENST00000619119 TMUB1Q9BVT8 246 aa12.83□□□□□ -0.35
SEMA3B-214ENST00000619119 IGHV1-18A0A0C4DH31 117 aa12.83□□□□□ -0.36
SEMA3B-214ENST00000619119 SRSF8Q9BRL6 282 aaKnown RBP12.83□□□□□ -0.36
SEMA3B-214ENST00000619119 MBNL3Q9NUK0 354 aaKnown RBP12.83□□□□□ -0.36
SEMA3B-214ENST00000619119 IDI2-AS1Q9NZ38 188 aa12.83□□□□□ -0.36
SEMA3B-214ENST00000619119 PLCE1Q9P212 2302 aa12.83□□□□□ -0.36
SEMA3B-214ENST00000619119 J3QT63 122 aa12.83□□□□□ -0.36
SEMA3B-214ENST00000619119 TFF1P04155 84 aa12.83□□□□□ -0.36
SEMA3B-214ENST00000619119 ABHD12Q8N2K0 398 aa12.83□□□□□ -0.36
SEMA3B-214ENST00000619119 ZNF418Q8TF45 676 aaPredicted RBP12.83□□□□□ -0.36
SEMA3B-214ENST00000619119 JPT1Q9UK76 154 aa12.83□□□□□ -0.36
SEMA3B-214ENST00000619119 LSM4Q9Y4Z0 139 aaKnown RBP12.83□□□□□ -0.36
SEMA3B-214ENST00000619119 CHD8Q9HCK8 2581 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms