RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 BMPR1BO00238 502 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 GATA2P23769 480 aaPredicted RBP5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 TNFAIP6P98066 277 aaPredicted RBP5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 C10orf113Q5VZT2 155 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 SSX8Q7RTT4 187 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 OR2T6Q8NHC8 308 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 ITLN1Q8WWA0 313 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 RCHY1Q96PM5 261 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 OR8B2Q96RD0 313 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 TMEM70Q9BUB7 260 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 MRPL32Q9BYC8 188 aaKnown RBP5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 MRPL27Q9P0M9 148 aaKnown RBP5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 TP53TG3Q9ULZ0 132 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 CGB1A6NKQ9 187 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 GNLYP22749 145 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 BMI1P35226 326 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 CCL8P80075 99 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 UBE2V1Q13404 147 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 PDPNQ86YL7 162 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 ZCCHC24Q8N2G6 241 aaKnown RBP5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 PNKDQ8N490 385 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 BEX4Q9NWD9 120 aaPredicted RBP5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 MRPS16Q9Y3D3 137 aaKnown RBP5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 TGFAP01135 160 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 PPOXP50336 477 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 ADORA2A-AS1P86434 159 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 FBLN7Q53RD9 439 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 GCSAMQ8N6F7 178 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 ZNRF1Q8ND25 227 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 GRAMD2BQ96HH9 432 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 CLEC7AQ9BXN2 247 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 GSX1Q9H4S2 264 aaPredicted RBP5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 HIVEP3Q5T1R4 2406 aa5.69□□□□□ -1.5
SRGAP3-213ENST00000618999 SAA2-SAA4A0A096LPE2 208 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 UQCRFS1P47985 274 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 ATP5IP56385 69 aaPredicted RBP5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 BRWD1-AS2P59051 145 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 BLNKQ8WV28 456 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 HES4Q9HCC6 221 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 FOXA2Q9Y261 457 aaPredicted RBP5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 LSM4Q9Y4Z0 139 aaKnown RBP5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 COX11Q9Y6N1 276 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 ADGRG4Q8IZF6 3080 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 FAM181BA6NEQ2 426 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 OR4C46A6NHA9 309 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 F5H697 171 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 LEPROTL1O95214 131 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 P01737 135 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 GPR6P46095 362 aaPredicted RBP5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 RPL8P62917 257 aaKnown RBP5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 TNXAQ16473 311 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 SLC25A34Q6PIV7 304 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 RASL11AQ6T310 242 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 C12orf54Q6X4T0 127 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 NEUROG1Q92886 237 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 MAP1LC3CQ9BXW4 147 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 IGHV1-69-2A0A0G2JMI3 117 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 REG1AP05451 166 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 FRMD6-AS1P0C7T7 363 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 C18orf32Q8TCD1 76 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 EPG5Q9HCE0 2579 aa5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 SPENQ96T58 3664 aaKnown RBP5.68□□□□□ -1.5
SRGAP3-213ENST00000618999 A8MWL6 223 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 PEX7O00628 323 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 SAA2P0DJI9 122 aaPredicted RBP5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 CD177Q8N6Q3 437 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 OR1L8Q8NGR8 309 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 HARBI1Q96MB7 349 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 SSBP4Q9BWG4 385 aaPredicted RBP5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 IFI27L2Q9H2X8 130 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 AKAP6Q13023 2319 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 A0A1W2PN81 502 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 HIGD1CA8MV81 97 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 FNDC10F2Z333 226 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 CT45A6P0DMU7 189 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 CT45A5P0DMU8 189 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 CT45A7P0DMV0 189 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 ORM2P19652 201 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 FOXA3P55318 350 aaPredicted RBP5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 HBBP68871 147 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 EIF4EBP1Q13541 118 aaPredicted RBP5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 CDSNQ15517 529 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 CT45A1Q5HYN5 189 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 FAM201AQ5SY85 155 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 NUP37Q8NFH4 326 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 STXBP6Q8NFX7 210 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 CT45A3Q8NHU0 189 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 IGLV3-9A0A075B6K5 115 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 NKX6-3A6NJ46 265 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 GGTLC3B5MD39 225 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 EIF4EBP3O60516 100 aaPredicted RBP5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 NUDT3O95989 172 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 IGHV1-46P01743 117 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 TNFRSF1AP19438 455 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 HTR1DP28221 377 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 ZNF137PP52743 207 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 LINC00310P59036 64 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 PRR20EP86478 221 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms