RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 IGKV3-11P04433 115 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 TCTEX1D4Q5JR98 221 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 MOB3BQ86TA1 216 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 TMEM167BQ9NRX6 74 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 AMMECR1Q9Y4X0 333 aaPredicted RBP10.07□□□□□ -0.8
MATR3-227ENST00000618441 ARFGEF3Q5TH69 2177 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 TNCP24821 2201 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 OPRK1P41145 380 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 ERVK-16P61578 105 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 IGLV3-21P80748 117 aaPredicted RBP10.07□□□□□ -0.8
MATR3-227ENST00000618441 TEX29Q8N6K0 151 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 TMEM178AQ8NBL3 297 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 GALMQ96C23 342 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 FLYWCH2Q96CP2 140 aaKnown RBP10.07□□□□□ -0.8
MATR3-227ENST00000618441 URB1-AS1Q96HZ7 61 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 ZGRF1Q86YA3 2104 aa10.07□□□□□ -0.8
MATR3-227ENST00000618441 PPP1R32Q7Z5V6 425 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 CXorf67Q86X51 503 aaPredicted RBP10.06□□□□□ -0.8
MATR3-227ENST00000618441 NABP2Q9BQ15 211 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 ROS1P08922 2347 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 SPTY2D1-AS1A0A0U1RR47 76 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 SMIM27A0A1W2PRY6 76 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 PATE3B3GLJ2 98 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 GGTLC3B5MD39 225 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 SLC25A5P05141 298 aaKnown RBP10.06□□□□□ -0.8
MATR3-227ENST00000618441 ACP1P24666 158 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 EDDM3AQ14507 147 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 RNPS1Q15287 305 aaKnown RBP10.06□□□□□ -0.8
MATR3-227ENST00000618441 NDFIP1Q9BT67 221 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 IGHV1OR15-9A0A0B4J2B8 117 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 PYYP10082 97 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 HIST2H2BCQ6DN03 193 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 HIST2H2BDQ6DRA6 164 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 C10orf35Q96D05 121 aa10.06□□□□□ -0.8
MATR3-227ENST00000618441 FCN3O75636 299 aa10.05□□□□□ -0.8
MATR3-227ENST00000618441 P01737 135 aa10.05□□□□□ -0.8
MATR3-227ENST00000618441 GRPP07492 148 aa10.05□□□□□ -0.8
MATR3-227ENST00000618441 OR9G9P0C7N8 305 aa10.05□□□□□ -0.8
MATR3-227ENST00000618441 AAED1Q7RTV5 226 aa10.05□□□□□ -0.8
MATR3-227ENST00000618441 GRAMD2BQ96HH9 432 aa10.05□□□□□ -0.8
MATR3-227ENST00000618441 PMS2P5A8MQ11 134 aa10.05□□□□□ -0.8
MATR3-227ENST00000618441 PRSS1P07477 247 aa10.05□□□□□ -0.8
MATR3-227ENST00000618441 HOXA4Q00056 320 aaPredicted RBP10.05□□□□□ -0.8
MATR3-227ENST00000618441 KIAA1549LQ6ZVL6 1849 aa10.05□□□□□ -0.8
MATR3-227ENST00000618441 NGFP01138 241 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 TRAV24A0A0B4J272 114 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 A0A1W2PRD5 423 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 A0A1W2PRF3 423 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 A0A1W2PRM7 423 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 SP9P0CG40 484 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 TTC32Q5I0X7 151 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 PRR33A8MZF0 331 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 SLC25A53Q5H9E4 307 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 ZFAND6Q6FIF0 208 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 INO80CQ6PI98 192 aaPredicted RBP10.04□□□□□ -0.8
MATR3-227ENST00000618441 GNG12Q9UBI6 72 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 PEMTQ9UBM1 199 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 MYOD1P15172 320 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 ZNF414Q96IQ9 312 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 PRELID3AQ96N28 172 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 IDI2-AS1Q9NZ38 188 aa10.04□□□□□ -0.8
MATR3-227ENST00000618441 KLF13Q9Y2Y9 288 aaPredicted RBP10.04□□□□□ -0.8
MATR3-227ENST00000618441 TRAV3A0A0B4J244 114 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 SSBP2P81877 361 aaPredicted RBP10.03□□□□□ -0.8
MATR3-227ENST00000618441 MLANAQ16655 118 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 OR4X2Q8NGF9 303 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 PLXNB1O43157 2135 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 PSMB2P49721 201 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 FAM120AOSQ5T036 256 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 FREM1Q5H8C1 2179 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 MUC6Q6W4X9 2439 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 COL8A1P27658 744 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 CHCHD1Q96BP2 118 aaKnown RBP10.03□□□□□ -0.8
MATR3-227ENST00000618441 HIST1H4GQ99525 98 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 JPT1Q9UK76 154 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 VPREB3Q9UKI3 123 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 COL6A6A6NMZ7 2263 aa10.03□□□□□ -0.8
MATR3-227ENST00000618441 LTAP01374 205 aa10.02□□□□□ -0.8
MATR3-227ENST00000618441 PRTN3P24158 256 aa10.02□□□□□ -0.8
MATR3-227ENST00000618441 SRYQ05066 204 aa10.02□□□□□ -0.8
MATR3-227ENST00000618441 ZNF474Q6S9Z5 364 aaPredicted RBP10.02□□□□□ -0.8
MATR3-227ENST00000618441 OR5AN1Q8NGI8 311 aa10.02□□□□□ -0.8
MATR3-227ENST00000618441 FOXB1Q99853 325 aa10.02□□□□□ -0.8
MATR3-227ENST00000618441 INSIG2Q9Y5U4 225 aa10.02□□□□□ -0.8
MATR3-227ENST00000618441 MPDU1O75352 247 aa10.02□□□□□ -0.81
MATR3-227ENST00000618441 REG1BP48304 166 aa10.02□□□□□ -0.81
MATR3-227ENST00000618441 DDB2Q92466 427 aa10.02□□□□□ -0.81
MATR3-227ENST00000618441 F8W1H4 67 aa10.02□□□□□ -0.81
MATR3-227ENST00000618441 FAM106CPP0CH98 169 aa10.02□□□□□ -0.81
MATR3-227ENST00000618441 XGP55808 180 aa10.02□□□□□ -0.81
MATR3-227ENST00000618441 FAM106AQ4KMX7 169 aa10.02□□□□□ -0.81
MATR3-227ENST00000618441 GTSCR1Q86UQ5 136 aa10.02□□□□□ -0.81
MATR3-227ENST00000618441 DEFB126Q9BYW3 111 aa10.02□□□□□ -0.81
MATR3-227ENST00000618441 CSDC2Q9Y534 153 aaKnown RBP10.02□□□□□ -0.81
MATR3-227ENST00000618441 TRIP6Q15654 476 aaKnown RBP10.01□□□□□ -0.81
MATR3-227ENST00000618441 NABP1Q96AH0 204 aa10.01□□□□□ -0.81
MATR3-227ENST00000618441 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
MATR3-227ENST00000618441 ASPMQ8IZT6 3477 aa10.01□□□□□ -0.81
MATR3-227ENST00000618441 KIR2DS5A0A0G2JLQ3 304 aa10.01□□□□□ -0.81
MATR3-227ENST00000618441 A0A0G2JNG1 304 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms