RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SPSB3Q6PJ21 355 aa9.3□□□□□ -0.92
CCDC144B-208ENST00000618081 IMMP2LQ96T52 175 aa9.3□□□□□ -0.92
CCDC144B-208ENST00000618081 LINC00614P0C842 121 aa9.3□□□□□ -0.92
CCDC144B-208ENST00000618081 RCHY1Q96PM5 261 aa9.3□□□□□ -0.92
CCDC144B-208ENST00000618081 OVOL2Q9BRP0 275 aa9.3□□□□□ -0.92
CCDC144B-208ENST00000618081 TMEM238C9JI98 176 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 MINOS1Q5TGZ0 78 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 VMO1Q7Z5L0 202 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 C11orf44Q8N8P7 122 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 MINOS1-NBL1R4GNA1 71 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 EVI2AP22794 236 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 FAM19A2Q8N3H0 131 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 C5orf30Q96GV9 206 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 TRBV6-7A0A0A0MS04 114 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 SNAI2O43623 268 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 IL18BPO95998 194 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 C15orf32Q32M92 178 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 CHCHD1Q96BP2 118 aaKnown RBP9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 LDLRAD4O15165 306 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 HOXD3P31249 432 aaPredicted RBP9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 TANC1Q9C0D5 1861 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 PLXNA4Q9HCM2 1894 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 IGKCP01834 107 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 ATP5G3P48201 142 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 RTBDNQ9BSG5 229 aaPredicted RBP9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 MBNL3Q9NUK0 354 aaKnown RBP9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 TIMM23O14925 209 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 LGALS1P09382 135 aaKnown RBP9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 GNG5P63218 68 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 HAPLN4Q86UW8 402 aa9.29□□□□□ -0.92
CCDC144B-208ENST00000618081 MPTX1A8MV57 137 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 CD24P25063 80 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 ATXN8Q156A1 80 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 C18orf12Q96KH6 178 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 GNB1LQ9BYB4 327 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 PRCDQ00LT1 54 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 GTF3AQ92664 365 aaKnown RBP9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 SPRR3Q9UBC9 169 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 MED13LQ71F56 2210 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 TRAV8-4A0A0B4J246 113 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 B4DSR2 109 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 SEC11AP67812 179 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 TEX38Q6PEX7 206 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 TOMM40O96008 361 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 TIMP3P35625 211 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 ATP5L2Q7Z4Y8 100 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 EFNA4P52798 201 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 FBLN7Q53RD9 439 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 C3orf56Q8N813 242 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 USMG5Q96IX5 58 aa9.28□□□□□ -0.92
CCDC144B-208ENST00000618081 KIAA1549LQ6ZVL6 1849 aa9.27□□□□□ -0.92
CCDC144B-208ENST00000618081 IGHV1-18A0A0C4DH31 117 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 GATA2P23769 480 aaPredicted RBP9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 RPL36AP83881 106 aaKnown RBP9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 ZXDCQ2QGD7 858 aaPredicted RBP9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 RPL36ALQ969Q0 106 aaKnown RBP9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 IGHV2-26A0A0B4J1V2 119 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 PRB3Q04118 309 aaPredicted RBP9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 ERCC8Q13216 396 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 PSG8Q9UQ74 426 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 COL4A5P29400 1685 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 A0A1W2PRE2 83 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 INSP01308 110 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 ST6GALNAC6Q969X2 333 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 WBP1Q96G27 269 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 NCOA6Q14686 2063 aaPredicted RBP9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 GATD1Q8NB37 220 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 CEACAM8P31997 349 aaPredicted RBP9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 ZNF525Q8N782 197 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 DERL1Q9BUN8 251 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 DSCAMO60469 2012 aa9.27□□□□□ -0.93
CCDC144B-208ENST00000618081 IGLV3-12A0A075B6K2 115 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 TRGV1A0A0A0MS02 117 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 CFHR1Q03591 330 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 PRDM13Q9H4Q3 707 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 OSTCQ9NRP0 149 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 SRP19P09132 144 aaKnown RBP9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 TMEM8BA6NDV4 472 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 OOSP1A8MZH6 123 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 PAX4O43316 350 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 IFITM3Q01628 133 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 GFI1BQ5VTD9 330 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 MRPL14Q6P1L8 145 aaKnown RBP9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 KLHL30-AS1Q8NEE0 82 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 FAM223BA6NKX1 122 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 RPL35AP18077 110 aaKnown RBP9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 FAM223AQ8IWN6 122 aa9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 RNF166Q96A37 237 aaPredicted RBP9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 NHP2Q9NX24 153 aaKnown RBP9.26□□□□□ -0.93
CCDC144B-208ENST00000618081 M0R1W7 72 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 DUTP33316 252 aaKnown RBP9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 EFNB3Q15768 340 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 SRSF7Q16629 238 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 TMEM105Q8N8V8 129 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 LEPROTO15243 131 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 TMEM219Q86XT9 240 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 CLDN16Q9Y5I7 305 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 TEX43Q6ZNM6 134 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 SMPXQ9UHP9 88 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms