RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 DLX6P56179 175 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 EDDM3AQ14507 147 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 GUSBP1Q15486 140 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 AMTNQ6UX39 209 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 RNF44Q7L0R7 432 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 FAM234AQ9H0X4 552 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 IGLL5B9A064 214 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 SPINK4O60575 86 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 ZG16O60844 167 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 CSN1S1P47710 185 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 TSPO2Q5TGU0 170 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 RBPMS2Q6ZRY4 209 aaKnown RBP12.51□□□□□ -0.41
NOP56-220ENST00000616692 Q6ZS49 121 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 ZNF645Q8N7E2 425 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 OCC1Q8TAD7 63 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.51□□□□□ -0.41
NOP56-220ENST00000616692 RASL11BQ9BPW5 248 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 UTP20O75691 2785 aaKnown RBP12.5□□□□□ -0.41
NOP56-220ENST00000616692 FER1L5A0AVI2 2057 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 K7ERJ3 54 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 CRYAAP02489 173 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 Q0VFX4 171 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 SSX8Q7RTT4 187 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 IL1F10Q8WWZ1 152 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 RDH5Q92781 318 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 KCNIP2Q9NS61 270 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 PRO0628Q9UI54 55 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 NOTCH2Q04721 2471 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 B3GALT2O43825 422 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 NXPH3O95157 252 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 NDUFA7O95182 113 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 COX6B1P14854 86 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 LINC01545Q5VT33 79 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 OR4C13Q8NGP0 309 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 SIRPDQ9H106 197 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 IFI27L2Q9H2X8 130 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 IDI2-AS1Q9NZ38 188 aa12.5□□□□□ -0.41
NOP56-220ENST00000616692 PLPP1O14494 284 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 MALP21145 153 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 SLC48A1Q6P1K1 146 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 ANKRD37Q7Z713 158 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 C1orf43Q9BWL3 253 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 TMEM14AQ9Y6G1 99 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 NPIPB13A6NJU9 1138 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 NPIPB4C9JG80 1138 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 COX6A1P12074 109 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 VWC2Q2TAL6 325 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 GFRALQ6UXV0 394 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 CARD19Q96LW7 228 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 EMC9Q9Y3B6 208 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 V9GYV3 84 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 POLEQ07864 2286 aa12.49□□□□□ -0.41
NOP56-220ENST00000616692 GLI4P10075 376 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 GRNP28799 593 aaKnown RBP12.48□□□□□ -0.41
NOP56-220ENST00000616692 FXYD2P54710 66 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 RPS16P62249 146 aaKnown RBP12.48□□□□□ -0.41
NOP56-220ENST00000616692 CFAP126Q5VTH2 177 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 KCTD18Q6PI47 426 aaPredicted RBP12.48□□□□□ -0.41
NOP56-220ENST00000616692 HRCT1Q6UXD1 115 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 SLC22A24Q8N4F4 322 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 ARHGAP5-AS1Q96IT6 56 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 NBPF19A0A087WUL8 3843 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 ITPR2Q14571 2701 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 GGTLC3B5MD39 225 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 NMUP48645 174 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 TMEM50BP56557 158 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 HES1Q14469 280 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 SPRNQ5BIV9 151 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 ZNF525Q8N782 197 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 KLF12Q9Y4X4 402 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 ABCA12Q86UK0 2595 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 CREBBPQ92793 2442 aa12.48□□□□□ -0.41
NOP56-220ENST00000616692 IGHV1-45A0A0A0MS14 117 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 IGHV1-24A0A0C4DH33 117 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 SH2D7A6NKC9 451 aaPredicted RBP12.47□□□□□ -0.41
NOP56-220ENST00000616692 GCSHP23434 173 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 BAALCQ8WXS3 180 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 FBXL15Q9H469 300 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 CACNA1DQ01668 2161 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 ATP5G3P48201 142 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 HERVK_113P63121 156 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 ID3Q02535 119 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 MALLQ13021 153 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 TBC1D28Q2M2D7 210 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 OR1L4Q8NGR5 311 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 CYYR1Q96J86 154 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 SPANXCQ9NY87 97 aa12.47□□□□□ -0.41
NOP56-220ENST00000616692 CRLF1O75462 422 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 SMCPP49901 116 aaPredicted RBP12.46□□□□□ -0.41
NOP56-220ENST00000616692 PHLDA2Q53GA4 152 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 OR10A2Q9H208 303 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 PHF3Q92576 2039 aaKnown RBP12.46□□□□□ -0.41
NOP56-220ENST00000616692 FAM90A18PA6NE21 464 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 FAM90A16PA6NEW6 464 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 FAM90A8PA6NJQ4 464 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 FAM90A9PA6NNJ1 464 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 MPIG6BO95866 241 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 HLA-DOBP13765 273 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 ZNF415Q09FC8 603 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms