RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 GCSAMLQ5JQS6 135 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 C10orf91Q5T1B1 145 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 ZNF562Q6V9R5 426 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 NPIPB3Q92617 1050 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 CITED2Q99967 270 aaPredicted RBP8.42□□□□□ -1.06
COL4A1-205ENST00000615732 NKX6-2Q9C056 277 aaPredicted RBP8.42□□□□□ -1.06
COL4A1-205ENST00000615732 FNDC4Q9H6D8 234 aaPredicted RBP8.42□□□□□ -1.06
COL4A1-205ENST00000615732 SERTAD4Q9NUC0 356 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 AURKAIP1Q9NWT8 199 aaPredicted RBP8.42□□□□□ -1.06
COL4A1-205ENST00000615732 VAX2Q9UIW0 290 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 COL7A1Q02388 2944 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 TCRBV4S1A1TA0A5B7 111 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 ADARB2-AS1A8MUL3 147 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 CXorf1O96002 111 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 SRP19P09132 144 aaKnown RBP8.41□□□□□ -1.06
COL4A1-205ENST00000615732 SELENOTP62341 195 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 CX3CL1P78423 397 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 SSBP2P81877 361 aaPredicted RBP8.41□□□□□ -1.06
COL4A1-205ENST00000615732 PRR20EP86478 221 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 PRR20CP86479 221 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 PRR20DP86480 221 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 PRR20BP86481 221 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 PRR20AP86496 221 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 GUCA2BQ16661 112 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 SOHLH1Q5JUK2 328 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 PVRIGQ6DKI7 326 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 Q6ZS46 218 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 C19orf35Q6ZS72 473 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.41□□□□□ -1.06
COL4A1-205ENST00000615732 Q8N9W7 124 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 THAP8Q8NA92 274 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 OR1L4Q8NGR5 311 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 RNF2Q99496 336 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 SLC25A33Q9BSK2 321 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 FAM103A1Q9BTL3 118 aaKnown RBP8.41□□□□□ -1.06
COL4A1-205ENST00000615732 SCRT1Q9BWW7 348 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 WNT10AQ9GZT5 417 aa8.41□□□□□ -1.06
COL4A1-205ENST00000615732 IGHV3-21A0A0B4J1V1 117 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 A6NDX4 124 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 NPIPB5A8MRT5 1133 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 COX7A2P2O60397 106 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 IGHV3-48P01763 117 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 HLA-DRB1P01911 266 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 LINC00869P0C866 280 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 CTRB1P17538 263 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 MFAP2P55001 183 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 TAS2R45P59539 299 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 AKIRIN2Q53H80 203 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 CTRB2Q6GPI1 263 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 SLC35E3Q7Z769 313 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 TRGV9Q99603 122 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 MOB4Q9Y3A3 225 aa8.4□□□□□ -1.06
COL4A1-205ENST00000615732 IGKV1OR2-108A0A075B7D4 117 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 M0R036 132 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 FABP1P07148 127 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 CRYGCP07315 174 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 STAG3L2P0CL84 134 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 STAG3L3P0CL85 134 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 ARL14EPLP0DKL9 152 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 BLCAPP62952 87 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 NDPQ00604 133 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 PMS2P11Q13670 270 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 FAM78BQ5VT40 261 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 NDUFA11Q86Y39 141 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 Q8N2B8 174 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 CYB561D1Q8N8Q1 229 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 WIPF2Q8TF74 440 aaPredicted RBP8.39□□□□□ -1.07
COL4A1-205ENST00000615732 RBM14Q96PK6 669 aaKnown RBP8.39□□□□□ -1.07
COL4A1-205ENST00000615732 PFDN5Q99471 154 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 MRPL32Q9BYC8 188 aaKnown RBP8.39□□□□□ -1.07
COL4A1-205ENST00000615732 TMPRSS5Q9H3S3 457 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 TECRQ9NZ01 308 aaKnown RBP8.39□□□□□ -1.07
COL4A1-205ENST00000615732 FUT9Q9Y231 359 aa8.39□□□□□ -1.07
COL4A1-205ENST00000615732 IGHV7-81A0A0B4J1V7 117 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 PAGE4O60829 102 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 SCGB2A1O75556 95 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 OR5G3P0C626 314 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 IGLL1P15814 213 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 GATA2P23769 480 aaPredicted RBP8.38□□□□□ -1.07
COL4A1-205ENST00000615732 GCHFRP30047 84 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 MEF2BQ02080 365 aaPredicted RBP8.38□□□□□ -1.07
COL4A1-205ENST00000615732 BTN1A1Q13410 526 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 ECSCRQ19T08 205 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 SPATA31B1PQ5VZV4 182 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 ATRAIDQ6UW56 229 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 MIR17HGQ75NE6 70 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 TTC9CQ8N5M4 171 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 TMEM116Q8NCL8 245 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 CLRN3Q8NCR9 226 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 OR4F17Q8NGA8 305 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 OR4X1Q8NH49 305 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 GATAD1Q8WUU5 269 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 OR4F4Q96R69 305 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 PRSS22Q9GZN4 317 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 THYN1Q9P016 225 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 MRPL36Q9P0J6 103 aaKnown RBP8.38□□□□□ -1.07
COL4A1-205ENST00000615732 DOK5Q9P104 306 aa8.38□□□□□ -1.07
COL4A1-205ENST00000615732 RYR2Q92736 4967 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 IGKV1D-37A0A075B6S9 117 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 SH2D7A6NKC9 451 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms