RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 FABP5P3A8MUU1 101 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 H3BVH4 76 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 ADIPOQQ15848 244 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 NUDT10Q8NFP7 164 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 NUDT11Q96G61 164 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 IGHV3OR16-12A0A075B7B8 117 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 TMEM50AO95807 157 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 WNT2P09544 360 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 LHFPL4Q7Z7J7 247 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 ST6GALNAC6Q969X2 333 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
GGA3-220ENST00000613421 ITGB1BP1O14713 200 aa11.27□□□□□ -0.6
GGA3-220ENST00000613421 WDR86Q86TI4 376 aa11.27□□□□□ -0.6
GGA3-220ENST00000613421 TRGV9Q99603 122 aa11.27□□□□□ -0.6
GGA3-220ENST00000613421 PKDREJQ9NTG1 2253 aa11.27□□□□□ -0.6
GGA3-220ENST00000613421 IGHV3-11P01762 117 aa11.27□□□□□ -0.61
GGA3-220ENST00000613421 PSG1P11464 419 aa11.27□□□□□ -0.61
GGA3-220ENST00000613421 ERASQ7Z444 233 aa11.27□□□□□ -0.61
GGA3-220ENST00000613421 TMEM160Q9NX00 188 aa11.27□□□□□ -0.61
GGA3-220ENST00000613421 PAX9P55771 341 aa11.27□□□□□ -0.61
GGA3-220ENST00000613421 ATP5L2Q7Z4Y8 100 aa11.27□□□□□ -0.61
GGA3-220ENST00000613421 ASCL2Q99929 193 aa11.27□□□□□ -0.61
GGA3-220ENST00000613421 RNF5Q99942 180 aa11.27□□□□□ -0.61
GGA3-220ENST00000613421 LY96Q9Y6Y9 160 aa11.27□□□□□ -0.61
GGA3-220ENST00000613421 TPTE2P1Q5T6R2 138 aa11.27□□□□□ -0.61
GGA3-220ENST00000613421 KIF26AQ9ULI4 1882 aaPredicted RBP11.27□□□□□ -0.61
GGA3-220ENST00000613421 LURAP1LQ8IV03 231 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.26□□□□□ -0.61
GGA3-220ENST00000613421 ATP5LO75964 103 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 ERVK11-1P61568 191 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 ACTL10Q5JWF8 245 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 Q6ZR03 302 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 CRIM1Q9NZV1 1036 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 A0A1B0GWJ7 208 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 IGKV1-16P04430 117 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 LGALS3P17931 250 aaKnown RBP11.26□□□□□ -0.61
GGA3-220ENST00000613421 LOC107984156A0A0G2JMH3 177 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 OR11H12B2RN74 326 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 CEACAM4O75871 244 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 PPP1R17O96001 155 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 RNASE2P10153 161 aaKnown RBP11.26□□□□□ -0.61
GGA3-220ENST00000613421 ARL17AQ8IVW1 177 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 OR11H1Q8NG94 326 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 OR11H2Q8NH07 326 aa11.26□□□□□ -0.61
GGA3-220ENST00000613421 INTS1Q8N201 2190 aaKnown RBP11.26□□□□□ -0.61
GGA3-220ENST00000613421 FNDC10F2Z333 226 aa11.25□□□□□ -0.61
GGA3-220ENST00000613421 FAM71F2Q6NXP2 309 aa11.25□□□□□ -0.61
GGA3-220ENST00000613421 SCRT1Q9BWW7 348 aa11.25□□□□□ -0.61
GGA3-220ENST00000613421 SLC25A39Q9BZJ4 359 aaPredicted RBP11.25□□□□□ -0.61
GGA3-220ENST00000613421 LYPD2Q6UXB3 125 aa11.25□□□□□ -0.61
GGA3-220ENST00000613421 RNF138Q8WVD3 245 aa11.25□□□□□ -0.61
GGA3-220ENST00000613421 IGKV1-39P01597 117 aa11.25□□□□□ -0.61
GGA3-220ENST00000613421 IGKV1D-39P04432 117 aa11.25□□□□□ -0.61
GGA3-220ENST00000613421 PMS2P5A8MQ11 134 aa11.25□□□□□ -0.61
GGA3-220ENST00000613421 LINC00614P0C842 121 aa11.25□□□□□ -0.61
GGA3-220ENST00000613421 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
GGA3-220ENST00000613421 BUB1B-PAK6H3BSN5 160 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 KLRD1Q13241 179 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 AMMECR1LQ6DCA0 310 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 LY6DQ14210 128 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 VMO1Q7Z5L0 202 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 TMEM190Q8WZ59 177 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 FOXC2Q99958 501 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 TRAV8-6A0A0B4J262 113 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 SNAI2O43623 268 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 NDUFS6O75380 124 aaKnown RBP11.24□□□□□ -0.61
GGA3-220ENST00000613421 PLA2G2CQ5R387 149 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 SIGLEC9Q9Y336 463 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 TCRAP04437 139 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 EXOC3-AS1Q8N2X6 119 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 CACNA1HO95180 2353 aa11.24□□□□□ -0.61
GGA3-220ENST00000613421 OR5AN1Q8NGI8 311 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 RNASE4P34096 147 aaKnown RBP11.23□□□□□ -0.61
GGA3-220ENST00000613421 PAPPA-AS1Q5QFB9 102 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 PEF1Q9UBV8 284 aaKnown RBP11.23□□□□□ -0.61
GGA3-220ENST00000613421 UBE2L6O14933 153 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 TNFSF13O75888 250 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 PAX1P15863 534 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 PLP1P60201 277 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 C19orf54Q5BKX5 351 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 NIT1Q86X76 327 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 COL4A3Q01955 1670 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 OOSP1A8MZH6 123 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 H7C2G1 150 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 RPRMLQ8N4K4 120 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 KIR3DL3Q8N743 410 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 SCGB3A1Q96QR1 104 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 LAMTOR2Q9Y2Q5 125 aa11.23□□□□□ -0.61
GGA3-220ENST00000613421 ZNF106Q9H2Y7 1883 aaKnown RBP11.23□□□□□ -0.61
GGA3-220ENST00000613421 TRAV9-2A0A087WT02 112 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 GATA4P43694 442 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 MLANAQ16655 118 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 DKK1O94907 266 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 TGFAP01135 160 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 SAMD13Q5VXD3 122 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 CHCHD1Q96BP2 118 aaKnown RBP11.22□□□□□ -0.61
GGA3-220ENST00000613421 COL6A6A6NMZ7 2263 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 IL15RAQ13261 267 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 MINOS1Q5TGZ0 78 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 NEUROG1Q92886 237 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 267.7 ms