RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 IGHV1-8P0DP01 117 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 CDKN1AP38936 164 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 CDKN1BP46527 198 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 MRGPRG-AS1Q2M3A8 158 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 IBA57Q5T440 356 aaKnown RBP11.79□□□□□ -0.52
CDH1-213ENST00000612417 C10orf113Q5VZT2 155 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 KIR2DL5AQ8N109 375 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 ZNF843Q8N446 348 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 NPIPB3Q92617 1050 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 ZNF355PQ9NSJ1 428 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 COL12A1Q99715 3063 aa11.78□□□□□ -0.52
CDH1-213ENST00000612417 PLXNB1O43157 2135 aa11.78□□□□□ -0.52
CDH1-213ENST00000612417 TRAV5A0A0B4J249 113 aa11.78□□□□□ -0.52
CDH1-213ENST00000612417 A0A1W2PPI3 338 aa11.78□□□□□ -0.52
CDH1-213ENST00000612417 SERF1AO75920 110 aa11.78□□□□□ -0.52
CDH1-213ENST00000612417 SCGB1D1O95968 90 aa11.78□□□□□ -0.52
CDH1-213ENST00000612417 FRMD6-AS1P0C7T7 363 aa11.78□□□□□ -0.52
CDH1-213ENST00000612417 C1orf194Q5T5A4 169 aa11.78□□□□□ -0.52
CDH1-213ENST00000612417 PATE2Q6UY27 113 aa11.78□□□□□ -0.52
CDH1-213ENST00000612417 C11orf42Q8N5U0 333 aa11.78□□□□□ -0.52
CDH1-213ENST00000612417 ZNF462Q96JM2 2506 aa11.78□□□□□ -0.52
CDH1-213ENST00000612417 M0R143 59 aa11.77□□□□□ -0.52
CDH1-213ENST00000612417 SLC25A17O43808 307 aa11.77□□□□□ -0.52
CDH1-213ENST00000612417 CRYGCP07315 174 aa11.77□□□□□ -0.52
CDH1-213ENST00000612417 TMEM136Q6ZRR5 245 aa11.77□□□□□ -0.52
CDH1-213ENST00000612417 TNFRSF14Q92956 283 aa11.77□□□□□ -0.52
CDH1-213ENST00000612417 PAXXQ9BUH6 204 aa11.77□□□□□ -0.52
CDH1-213ENST00000612417 POLR3KQ9Y2Y1 108 aaPredicted RBP11.77□□□□□ -0.52
CDH1-213ENST00000612417 USP9XQ93008 2570 aaPredicted RBP11.77□□□□□ -0.53
CDH1-213ENST00000612417 IGLC7A0M8Q6 106 aa11.77□□□□□ -0.53
CDH1-213ENST00000612417 RBX1P62877 108 aa11.77□□□□□ -0.53
CDH1-213ENST00000612417 ETFRF1Q6IPR1 90 aa11.77□□□□□ -0.53
CDH1-213ENST00000612417 FAM231DQ6ZW35 169 aa11.77□□□□□ -0.53
CDH1-213ENST00000612417 Q6ZWC4 215 aa11.77□□□□□ -0.53
CDH1-213ENST00000612417 TEX45Q8NA69 505 aa11.77□□□□□ -0.53
CDH1-213ENST00000612417 TMEM133Q9H2Q1 129 aa11.77□□□□□ -0.53
CDH1-213ENST00000612417 AMMECR1Q9Y4X0 333 aaPredicted RBP11.77□□□□□ -0.53
CDH1-213ENST00000612417 PAX2Q02962 417 aa11.76□□□□□ -0.53
CDH1-213ENST00000612417 FXYD3Q14802 87 aa11.76□□□□□ -0.53
CDH1-213ENST00000612417 OR10J3Q5JRS4 329 aa11.76□□□□□ -0.53
CDH1-213ENST00000612417 ZNF329Q86UD4 541 aa11.76□□□□□ -0.53
CDH1-213ENST00000612417 FXYD5Q96DB9 178 aa11.76□□□□□ -0.53
CDH1-213ENST00000612417 TPSG1Q9NRR2 321 aa11.76□□□□□ -0.53
CDH1-213ENST00000612417 MRPL36Q9P0J6 103 aaKnown RBP11.76□□□□□ -0.53
CDH1-213ENST00000612417 NAT8BQ9UHF3 227 aa11.76□□□□□ -0.53
CDH1-213ENST00000612417 DOPEY1Q5JWR5 2465 aa11.76□□□□□ -0.53
CDH1-213ENST00000612417 EREGO14944 169 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 HLA-DQA1P01909 254 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 AMY1AP04745 511 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 PYYP10082 97 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 MGST1P10620 155 aaKnown RBP11.75□□□□□ -0.53
CDH1-213ENST00000612417 MYCNOSP40205 109 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 STXBP6Q8NFX7 210 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 OR8B3Q8NGG8 313 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 OR8B2Q96RD0 313 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 PEX7O00628 323 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 RASL11AQ6T310 242 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 SMIM15Q7Z3B0 74 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 BAGE3Q86Y29 109 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 BAGE2Q86Y30 109 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 MBD6Q96DN6 1003 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 RITA1Q96K30 269 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 TRGV9Q99603 122 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 ATG101Q9BSB4 218 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 TACC2O95359 2948 aa11.75□□□□□ -0.53
CDH1-213ENST00000612417 IZUMO1RA6ND01 250 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 CRYGBP07316 175 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 NPSP0C0P6 89 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 TPTE2P1Q5T6R2 138 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 ZNF841Q6ZN19 808 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 TEX43Q6ZNM6 134 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 WIPF2Q8TF74 440 aaPredicted RBP11.74□□□□□ -0.53
CDH1-213ENST00000612417 GNB4Q9HAV0 340 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 C22orf46C9J442 243 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 F2Z2F3 143 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 NDUFS7O75251 213 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 IGLV1-47P01700 117 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 SNRPCP09234 159 aaKnown RBP11.74□□□□□ -0.53
CDH1-213ENST00000612417 BMI1P35226 326 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 LINC00305Q7Z4B0 112 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 TMEM116Q8NCL8 245 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 PERPQ96FX8 193 aa11.74□□□□□ -0.53
CDH1-213ENST00000612417 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
CDH1-213ENST00000612417 BRS3P32247 399 aa11.73□□□□□ -0.53
CDH1-213ENST00000612417 SMIM12Q96EX1 92 aa11.73□□□□□ -0.53
CDH1-213ENST00000612417 LINC00479Q96M42 142 aa11.73□□□□□ -0.53
CDH1-213ENST00000612417 TBX15Q96SF7 602 aa11.73□□□□□ -0.53
CDH1-213ENST00000612417 HSPB9Q9BQS6 159 aa11.73□□□□□ -0.53
CDH1-213ENST00000612417 TNFRSF19Q9NS68 423 aa11.73□□□□□ -0.53
CDH1-213ENST00000612417 ARHGAP32A7KAX9 2087 aa11.73□□□□□ -0.53
CDH1-213ENST00000612417 IGHV2-26A0A0B4J1V2 119 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 IGHV3-48P01763 117 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 REG1AP05451 166 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
CDH1-213ENST00000612417 MFAP2P55001 183 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 TCL1AP56279 114 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 CORTO00230 105 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 BMPR1BO00238 502 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 RBP4P02753 201 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 GPR6P46095 362 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms