RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 TMEM155Q4W5P6 130 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 FAM209BQ5JX69 171 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 ATOH7Q8N100 152 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 CHD9Q3L8U1 2897 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 LOXP28300 417 aaPredicted RBP10.68□□□□□ -0.7
TCF3-220ENST00000611869 HBBP68871 147 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 Q6ZPA2 131 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 DMRT1Q9Y5R6 373 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 CD99P14209 185 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 CKS2P33552 79 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 DIAPH2-AS1Q14236 149 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 TCF24Q7RTU0 167 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 A0A1W2PPI3 338 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 ADMP35318 185 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 TPTE2P1Q5T6R2 138 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 MGPP08493 103 aa10.68□□□□□ -0.7
TCF3-220ENST00000611869 ARHGAP21Q5T5U3 1957 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 LEPROTL1O95214 131 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 IGHV3-11P01762 117 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 SSBP4Q9BWG4 385 aaPredicted RBP10.67□□□□□ -0.7
TCF3-220ENST00000611869 SIAH2O43255 324 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 CNTFRP26992 372 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 MSMPQ1L6U9 139 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 VMO1Q7Z5L0 202 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 FAM19A2Q8N3H0 131 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 ATG101Q9BSB4 218 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 SCRT1Q9BWW7 348 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 SRRM4A7MD48 611 aaKnown RBP10.67□□□□□ -0.7
TCF3-220ENST00000611869 SERF1AO75920 110 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 GRNP28799 593 aaKnown RBP10.67□□□□□ -0.7
TCF3-220ENST00000611869 RPP21Q9H633 154 aaKnown RBP10.67□□□□□ -0.7
TCF3-220ENST00000611869 OSTCQ9NRP0 149 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 HSPB8Q9UJY1 196 aa10.67□□□□□ -0.7
TCF3-220ENST00000611869 TM4SF20Q53R12 229 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 PRR31Q5SQ13 230 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 C10orf91Q5T1B1 145 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 TEX36Q5VZQ5 186 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 TMEM208Q9BTX3 173 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 LINC00587B1AMM8 73 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 SOD3P08294 240 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 OR10J6PQ8NGY7 276 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 PTTG1IPP53801 180 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 RHOGP84095 191 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 UNQ6494/PRO21346Q6UXR6 183 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 TMEM116Q8NCL8 245 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 COL25A1Q9BXS0 654 aaPredicted RBP10.66□□□□□ -0.7
TCF3-220ENST00000611869 A0A1W2PS18 150 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 GGCTO75223 188 aaKnown RBP10.66□□□□□ -0.7
TCF3-220ENST00000611869 EFNA4P52798 201 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 ZNF600Q6ZNG1 722 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 FMC1Q96HJ9 113 aa10.66□□□□□ -0.7
TCF3-220ENST00000611869 PMS2P5A8MQ11 134 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 CX3CL1P78423 397 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 PVRIGQ6DKI7 326 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 EXOC3-AS1Q8N2X6 119 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 C8orf46Q8TAG6 207 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 LINC00479Q96M42 142 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 HIST1H2BLQ99880 126 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 SLX1AQ9BQ83 275 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 TBL2Q9Y4P3 447 aaKnown RBP10.65□□□□□ -0.7
TCF3-220ENST00000611869 TRAV40A0A0B4J280 105 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 OR5AN1Q8NGI8 311 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 NCOR1P1Q9H4R4 102 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 TPSG1Q9NRR2 321 aa10.65□□□□□ -0.7
TCF3-220ENST00000611869 F11RQ9Y624 299 aaKnown RBP10.65□□□□□ -0.7
TCF3-220ENST00000611869 IZUMO1RA6ND01 250 aa10.65□□□□□ -0.71
TCF3-220ENST00000611869 RAB9AP51151 201 aa10.65□□□□□ -0.71
TCF3-220ENST00000611869 SAPCD1Q5SSQ6 148 aa10.65□□□□□ -0.71
TCF3-220ENST00000611869 IGF2-ASQ6U949 168 aa10.65□□□□□ -0.71
TCF3-220ENST00000611869 TMEM219Q86XT9 240 aa10.65□□□□□ -0.71
TCF3-220ENST00000611869 HIST3H2BBQ8N257 126 aa10.65□□□□□ -0.71
TCF3-220ENST00000611869 OTORQ9NRC9 128 aa10.65□□□□□ -0.71
TCF3-220ENST00000611869 ANKRD11Q6UB99 2663 aaPredicted RBP10.64□□□□□ -0.71
TCF3-220ENST00000611869 SPATA45Q537H7 98 aa10.64□□□□□ -0.71
TCF3-220ENST00000611869 C5orf64Q2M2E5 130 aa10.64□□□□□ -0.71
TCF3-220ENST00000611869 C19orf35Q6ZS72 473 aa10.64□□□□□ -0.71
TCF3-220ENST00000611869 SH2D7A6NKC9 451 aaPredicted RBP10.64□□□□□ -0.71
TCF3-220ENST00000611869 TGFAP01135 160 aa10.64□□□□□ -0.71
TCF3-220ENST00000611869 ZNF833PQ6ZTB9 187 aa10.64□□□□□ -0.71
TCF3-220ENST00000611869 BPESC1Q9GZL8 116 aa10.64□□□□□ -0.71
TCF3-220ENST00000611869 NDUFA4L2Q9NRX3 87 aa10.64□□□□□ -0.71
TCF3-220ENST00000611869 GOLT1BQ9Y3E0 138 aa10.64□□□□□ -0.71
TCF3-220ENST00000611869 A0A1B0GUT8 65 aa10.64□□□□□ -0.71
TCF3-220ENST00000611869 A0A1B0GWJ7 208 aa10.64□□□□□ -0.71
TCF3-220ENST00000611869 BPTFQ12830 3046 aa10.63□□□□□ -0.71
TCF3-220ENST00000611869 TRAV9-1A0A075B6T8 112 aa10.63□□□□□ -0.71
TCF3-220ENST00000611869 WT1-ASQ06250 92 aa10.63□□□□□ -0.71
TCF3-220ENST00000611869 OR4B1Q8NGF8 309 aa10.63□□□□□ -0.71
TCF3-220ENST00000611869 LYPD6BQ8NI32 183 aa10.63□□□□□ -0.71
TCF3-220ENST00000611869 CTSZQ9UBR2 303 aa10.63□□□□□ -0.71
TCF3-220ENST00000611869 TRAV8-1A0A0A6YYK1 113 aa10.63□□□□□ -0.71
TCF3-220ENST00000611869 ID1P41134 155 aa10.63□□□□□ -0.71
TCF3-220ENST00000611869 SLC25A39Q9BZJ4 359 aaPredicted RBP10.63□□□□□ -0.71
TCF3-220ENST00000611869 FAM106AQ4KMX7 169 aa10.63□□□□□ -0.71
TCF3-220ENST00000611869 BRD3OSQ6XYD6 125 aa10.63□□□□□ -0.71
TCF3-220ENST00000611869 TRGV9Q99603 122 aa10.63□□□□□ -0.71
TCF3-220ENST00000611869 C9JCJ5 164 aa10.62□□□□□ -0.71
TCF3-220ENST00000611869 LHBP01229 141 aa10.62□□□□□ -0.71
TCF3-220ENST00000611869 FOXL1Q12952 345 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms